12th Community Wide Experiment on the
Critical Assessment of Techniques for Protein Structure Prediction
Improvements in models over copying from templates. Target: T0883-D1
Results Home Table Browser Estimate of Model Accuracy Results RR Assessment Results
  Tables   GDT Plots   Local Accuracy   Position-specific alignment   Templates   Help
 
Selected templates/models  |  Models strip charts  |  Templates strip charts
Models / 25 Best templates vs targets CA-CA distances
View: Templates Model Difference     
Green line: distance between the aligned CA atoms in a template and the experimental structure in the LGA sequence-independent superposition under the 5A distance cutoff (see LGA description).
Blue line: distance between the corresponding CA atoms in a model and the experimental structure in the LGA sequence-independent superposition under the 5A distance cutoff.
Red line = (blue line) - (green thick line): difference between the corresponding Model-Target and Template-Target CA-CA distances (see above). Negative values show regions where a model has better fit to the target than the template, i.e. areas of potential improvement over the template.
Thin lines: other templates
The plot above is generated applying the moving average method with window of 3 positions.
Color gamma <-5 (-5; -2) (-2; -0.5) (-0.5; 0.5) (0.5; 2) (2; 5) >5 or N/A
Differences percentage0.0%1.8%6.5%87.1%3.7%0.9%0.0%
Radio buttons select the template for which difference is calculated

Checkboxes select template for visualization in the graph

* the best template selected by assessors

Top 25 Templates
  #TemplatesLGA_SRMSD
1 4nu3A 90.09 0.96
2 3wp9A 89.941 1.11
3 4nu2A 89.399 1.1
4 3uyuA 89.35 1.07
5 3uyvA 89.225 1.07
6 3vn3B 88.627 1.08
7 4nuhA 88.619 1.17
8 4w8tA 39.189 2.14
9 1wxrA 37.948 2.01
10 4w8qA 37.682 2.15
11 4w8sA 37.393 2.1
12 4wa0A 37.281 1.97
13 1rwrA 36.345 2.1
14 2qv3A 36.249 2.22
15 4w8rA 36.045 2.17
16 3ak5D 35.21 2.24
17 4peuA 33.65 2.18
18 3syjA 33.573 2.4
19 2n3dA 32.637 2.12
20 3h09A 31.602 2.41
21 2iouH 30.325 2.49
22 2vjiA 30.323 2.4
23 4rm6A 30.286 2.38
24 1dabA 30.252 2.57
25 4u49A 29.929 2.41
Models
 #NameLGA_SRMSDGDT_TS 
1 T0883TS016_1-D1 92.216 0.94 89.40
2 T0883TS005_4-D1 92.716 1.03 89.40
3 T0883TS236_1-D1 91.42 0.90 89.40
4 T0883TS275_1-D1 92.067 1.17 89.40
5 T0883TS479_2-D1 92.115 0.96 89.29
6 T0883TS275_4-D1 91.851 1.18 89.29
7 T0883TS220_1-D1 91.592 0.86 89.29
8 T0883TS220_4-D1 92.188 1.05 89.17
9 T0883TS464_1-D1 92.449 1.12 89.17
10 T0883TS183_4-D1 91.962 1.00 89.06
11 T0883TS479_4-D1 91.756 1.16 88.94
12 T0883TS005_1-D1 92.536 1.06 88.94
13 T0883TS464_4-D1 92.477 1.12 88.94
14 T0883TS479_5-D1 93.302 1.10 88.94
15 T0883TS183_1-D1 92.259 1.01 88.83
16 T0883TS287_3-D1 91.582 1.19 88.83
17 T0883TS183_3-D1 91.814 1.13 88.71
18 T0883TS275_2-D1 91.622 1.02 88.71
19 T0883TS183_5-D1 93.059 1.17 88.71
20 T0883TS287_2-D1 91.234 0.98 88.71
21 T0883TS236_2-D1 91.321 1.13 88.59
22 T0883TS220_5-D1 91.244 0.91 88.59
23 T0883TS220_3-D1 91.37 0.96 88.59
24 T0883TS452_1-D1 92.053 1.17 88.59
25 T0883TS452_3-D1 92.026 1.11 88.59
26 T0883TS479_1-D1 92.162 1.00 88.59
27 T0883TS077_3-D1 91.618 0.94 88.48
28 T0883TS359_3-D1 91.495 0.98 88.36
29 T0883TS077_5-D1 91.313 1.05 88.36
30 T0883TS359_4-D1 91.495 0.98 88.36
31 T0883TS446_3-D1 92.56 1.17 88.36
32 T0883TS425_5-D1 91.931 1.03 88.36
33 T0883TS446_2-D1 91.915 1.14 88.25
34 T0883TS005_5-D1 92.497 0.99 88.25
35 T0883TS425_4-D1 91.497 1.05 88.25
36 T0883TS077_2-D1 91.463 1.07 88.25
37 T0883TS287_1-D1 91.917 1.07 88.25
38 T0883TS077_4-D1 91.2 1.04 88.25
39 T0883TS345_3-D1 91.064 1.09 88.13
40 T0883TS236_3-D1 91.264 0.95 88.13
41 T0883TS405_1-D1 91.412 1.17 88.02
42 T0883TS275_5-D1 91.382 1.22 88.02
43 T0883TS425_2-D1 91.426 1.10 88.02
44 T0883TS258_4-D1 91.642 1.10 88.02
45 T0883TS183_2-D1 91.032 1.16 87.90
46 T0883TS452_2-D1 91.022 1.07 87.90
47 T0883TS220_2-D1 91.01 1.02 87.90
48 T0883TS258_3-D1 91.499 1.11 87.90
49 T0883TS425_1-D1 91.155 0.97 87.90
50 T0883TS405_5-D1 91.45 1.21 87.90
51 T0883TS425_3-D1 91.463 1.02 87.79
52 T0883TS077_1-D1 91.41 1.05 87.67
53 T0883TS464_3-D1 91.283 1.02 87.67
54 T0883TS275_3-D1 91.176 1.01 87.67
55 T0883TS345_1-D1 90.889 1.00 87.67
56 T0883TS236_4-D1 91.551 1.15 87.56
57 T0883TS479_3-D1 90.812 1.09 87.56
58 T0883TS405_3-D1 91.012 1.27 87.44
59 T0883TS405_4-D1 91.012 1.27 87.44
60 T0883TS405_2-D1 91.012 1.27 87.44
61 T0883TS313_1-D1 91.046 1.12 87.33
62 T0883TS250_3-D1 90.074 1.01 87.33
63 T0883TS345_4-D1 90.139 1.14 87.33
64 T0883TS345_5-D1 90.862 1.16 87.33
65 T0883TS250_5-D1 90.201 0.99 87.33
66 T0883TS250_1-D1 90.274 1.00 87.33
67 T0883TS005_3-D1 91.976 1.16 87.21
68 T0883TS250_2-D1 90.282 1.02 87.21
69 T0883TS251_3-D1 90.996 1.22 87.10
70 T0883TS119_1-D1 91.089 1.19 87.10
71 T0883TS313_5-D1 91.008 1.17 87.10
72 T0883TS313_3-D1 90.979 1.13 87.10
73 T0883TS349_1-D1 91.089 1.19 87.10
74 T0883TS250_4-D1 90.122 1.06 87.10
75 T0883TS313_2-D1 91.044 1.12 86.98
76 T0883TS236_5-D1 90.947 1.13 86.98
77 T0883TS421_3-D1 90.183 1.21 86.98
78 T0883TS258_1-D1 90.632 1.25 86.87
79 T0883TS287_4-D1 90.23 1.13 86.87
80 T0883TS313_4-D1 90.943 1.13 86.87
81 T0883TS258_2-D1 90.939 1.17 86.75
82 T0883TS258_5-D1 90.636 1.14 86.75
83 T0883TS251_2-D1 91.303 1.23 86.75
84 T0883TS345_2-D1 90.268 1.07 86.75
85 T0883TS446_1-D1 91.37 1.27 86.64
86 T0883TS028_1-D1 90.217 1.09 86.64
87 T0883TS421_2-D1 91.004 1.22 86.64
88 T0883TS359_2-D1 89.989 1.10 86.52
89 T0883TS359_1-D1 89.989 1.10 86.52
90 T0883TS357_1-D1 89.71 1.16 86.41
91 T0883TS166_1-D1 90.407 1.14 86.41
92 T0883TS421_5-D1 89.312 1.05 86.41
93 T0883TS446_5-D1 89.611 1.09 86.29
94 T0883TS357_4-D1 89.777 1.18 86.17
95 T0883TS287_5-D1 89.067 1.13 86.06
96 T0883TS357_5-D1 89.199 1.30 85.94
97 T0883TS380_4-D1 89.645 1.18 85.83
98 T0883TS048_1-D1 90.597 1.28 85.83
99 T0883TS092_1-D1 90.597 1.28 85.83
100 T0883TS357_3-D1 88.989 1.30 85.83
101 T0883TS026_4-D1 89.645 1.18 85.83
102 T0883TS357_2-D1 88.671 1.29 85.48
103 T0883TS444_5-D1 89.916 1.16 85.14
104 T0883TS026_3-D1 89.247 1.24 85.14
105 T0883TS251_5-D1 89.767 1.30 85.14
106 T0883TS382_3-D1 90.036 1.33 85.14
107 T0883TS380_3-D1 89.247 1.24 85.14
108 T0883TS026_2-D1 89.247 1.24 85.14
109 T0883TS380_2-D1 89.247 1.24 85.14
110 T0883TS382_4-D1 89.775 1.28 85.02
111 T0883TS382_1-D1 89.451 1.47 85.02
112 T0883TS005_2-D1 90.416 1.22 84.91
113 T0883TS382_5-D1 89.211 1.45 84.91
114 T0883TS382_2-D1 89.316 1.44 84.91
115 T0883TS026_1-D1 89.686 1.31 84.45
116 T0883TS380_1-D1 89.686 1.31 84.45
117 T0883TS421_4-D1 88.586 1.12 84.45
118 T0883TS026_5-D1 89.686 1.31 84.45
119 T0883TS380_5-D1 89.686 1.31 84.45
120 T0883TS359_5-D1 88.316 1.13 83.99
121 T0883TS421_1-D1 88.014 1.26 83.87
122 T0883TS444_4-D1 89.615 1.30 83.41
123 T0883TS251_1-D1 88.483 1.22 83.30
124 T0883TS446_4-D1 87.095 1.09 83.30
125 T0883TS407_2-D1 88.853 1.32 83.06
126 T0883TS444_3-D1 89.266 1.36 82.95
127 T0883TS251_4-D1 87.893 1.30 82.60
128 T0883TS407_1-D1 88.291 1.27 82.37
129 T0883TS467_1-D1 87.701 1.31 82.26
130 T0883TS467_4-D1 88.263 1.46 82.14
131 T0883TS467_2-D1 88.625 1.54 82.14
132 T0883TS455_3-D1 87.901 1.23 81.91
133 T0883TS407_5-D1 86.779 1.39 81.80
134 T0883TS407_4-D1 87.653 1.37 81.57
135 T0883TS452_4-D1 87.667 1.18 81.45
136 T0883TS444_2-D1 88.865 1.33 81.22
137 T0883TS407_3-D1 86.543 1.41 80.99
138 T0883TS444_1-D1 87.614 1.47 80.53
139 T0883TS467_3-D1 88.111 1.45 79.95
140 T0883TS467_5-D1 84.926 1.54 76.61
141 T0883TS455_1-D1 84.787 1.38 73.85
142 T0883TS180_1-D1 84.516 1.34 67.74
143 T0883TS180_2-D1 87.085 1.19 65.55
144 T0883TS455_4-D1 71.828 1.67 58.06
145 T0883TS180_3-D1 83.958 1.32 57.37
146 T0883TS455_2-D1 65.604 2.04 53.80
147 T0883TS180_4-D1 85.421 1.38 45.05
148 T0883TS432_1-D1 35.333 2.45 37.67
149 T0883TS432_2-D1 36.817 1.93 35.95
150 T0883TS432_4-D1 32.612 2.38 35.48
151 T0883TS432_5-D1 33.402 2.13 35.25
152 T0883TS432_3-D1 30.662 2.46 30.76
153 T0883TS452_5-D1 30.453 2.44 21.54
154 T0883TS451_1-D1 16.34 2.38 19.01
155 T0883TS451_4-D1 13.56 2.59 18.20
156 T0883TS451_5-D1 15.638 2.73 17.97
157 T0883TS451_3-D1 19.208 2.28 17.51
158 T0883TS451_2-D1 16.966 2.44 16.13
159 T0883TS434_2-D1 14.982 2.64 15.55
160 T0883TS434_3-D1 14.799 2.82 14.52
161 T0883TS180_5-D1 13.274 2.72 13.71
162 T0883TS434_1-D1 11.086 2.77 12.90
163 T0883TS464_5-D1 14.811 2.14 12.79
164 T0883TS434_4-D1 11.03 2.64 11.98
165 T0883TS434_5-D1 11.245 2.88 11.64
166 T0883TS464_2-D1 10.606 2.85 11.06
167 T0883TS321_1-D1 10.048 2.63 10.71
168 T0883TS321_2-D1 14.445 2.40 9.91
169 T0883TS321_3-D1 11.422 2.45 9.56
170 T0883TS321_5-D1 8.618 2.50 9.22
171 T0883TS321_4-D1 7.849 2.86 8.41
172 T0883TS455_5-D1 9.485 2.76 8.06
Difference model - template
# Templates
1 4nu3A
2 3wp9A
3 4nu2A
4 3uyuA
5 3uyvA
6 3vn3B
7 4nuhA
8 4w8tA
9 1wxrA
10 4w8qA
11 4w8sA
12 4wa0A
13 1rwrA
14 2qv3A
15 4w8rA
16 3ak5D
17 4peuA
18 3syjA
19 2n3dA
20 3h09A
21 2iouH
22 2vjiA
23 4rm6A
24 1dabA
25 4u49A
Protein Structure Prediction Center
Sponsored by the US National Institute of General Medical Sciences (NIH/NIGMS)
Please address any questions or queries to:
© 2007-2016, University of California, Davis