CASP3 Target T0067

1. Protein Name

Phosphatidylethanolamine Binding Protein

2. Organism Name

Human

3. Number of amino acids (approx)

187

4. Accession number

P30086

5. Sequence Database

Swiss-prot

6. Amino acid sequence

MPVDLSKWSGPLSLQEVDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDS
GKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRY
VWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKL
YEQLSGK

7. Homologous Sequence of known structure

no

8. Current state of the experimental work

Determination of the 3D structure of this protein to high
resolution has been completed. The co-ordinates have been
deposited with the PDB but are "ON HOLD" until publication.

Basically, this means once the paper is published I have to
tell the PDB they can release the co-ordinates. I am quite
happy not to tell them until a date that will no longer
affect your CASP3 experiments.

9. Interpretable map?

yes

10. Estimated date of chain tracing completion

Complete already

11. Estimated date of public release of structure

See Above (Current state).

12. Additional Information

The phosphatidylethaolamine binding protein family contains
homologues in many diverse species. They have no detectable
homology to other proteins.

During the course of sequence/structure analysis, a signature
for the sequence of this protein family (very highly conserved)
has been seen (also detected by SWISS-PROT - PROSITE.
This comprises:
[FY]-x-[LIVMF](3)-x-[DC]-P-D-x-P-[SN]-x(10)-H
begining at residue [FY]64 and ending at H86.

13. Name

Dr Mark Banfield

14. Mailing address

Dept. of Biochemistry, University of Bristol
University Walk
BRISTOL BS8 1TD
U.K.

15. Telephone

44-(0)117 9289000

16. Fax

44-(0)117 9288274

17. Email

m.banfield@bris.ac.uk

18. Source of information about experiment

I have previously heard of CASP through email, but this submission was at the suggestion of Dr Alexey Murzin, LMB Cambridge.

Related Files

Template PDB file