####################################################### # # # ACE # # # # Ab-initio protein structure prediction # # & # # Comparative modeling # # # # Evaluator # # # # ----------------- 09/2000 # # # # by # # Adam Zemla # # # # Protein Structure Prediction Center # # Lawrence Livermore National Laboratory, CA # # # ####################################################### ########################## # # # ACE parameters: # # # ########################## SOV-METHOD 1 # 1 - SOV, 0 - SOV 94 # SS-DSSP-STRIDE 1 # 1 - DSSP, 2 - STRIDE (SS format only) SS-OUTPUT 1 # 1 - ON, 0 - OFF ########################## # # # ACE results: # # # ########################## # WARNING! The number of residues in SS section: 62 , MODEL 83 , TARGET 62 # The number of residues possible to evaluate: 62 SECONDARY STRUCTURE PREDICTION: NUM RES SS Prediction Probability SSP 15 S C H 1.00 SSP 16 H H H 1.00 SSP 17 I H H 1.00 SSP 18 L H H 1.00 SSP 19 T H H 0.90 SSP 20 A H H 1.00 SSP 21 L H H 0.90 SSP 22 R C H 0.80 SSP 23 E C H 0.70 SSP 24 K C C 0.60 SSP 25 Q C C 0.70 SSP 26 A C C 0.90 SSP 27 P C C 0.90 SSP 28 E C C 0.70 SSP 29 L C C 0.60 SSP 30 S C C 0.50 SSP 31 L C C 0.60 SSP 32 S C C 0.70 SSP 33 S H C 0.50 SSP 34 Q H C 0.50 SSP 35 D H H 0.60 SSP 36 L H H 0.50 SSP 37 E H H 0.50 SSP 38 L H H 0.60 SSP 39 V H H 0.60 SSP 40 T H C 0.50 SSP 41 K C C 0.70 SSP 42 E C C 0.80 SSP 43 D C C 0.90 SSP 44 P H C 0.70 SSP 45 K H C 0.50 SSP 46 A H C 0.60 SSP 47 L H E 0.50 SSP 48 A H E 0.70 SSP 49 V H E 0.60 SSP 50 A H E 0.90 SSP 51 L C E 0.70 SSP 52 N C E 0.70 SSP 53 W C C 0.60 SSP 54 D C C 0.70 SSP 55 I H C 0.70 SSP 56 K H C 0.60 SSP 57 K H H 0.50 SSP 58 T H H 0.60 SSP 59 E H H 0.80 SSP 60 T H H 0.90 SSP 61 V H H 0.90 SSP 62 Q H H 1.00 SSP 63 E H H 0.90 SSP 64 A H H 0.90 SSP 65 C H H 0.80 SSP 66 E H H 0.70 SSP 67 R H H 0.90 SSP 68 E H H 0.90 SSP 69 L H H 0.90 SSP 70 A H H 0.90 SSP 71 L H H 0.90 SSP 72 R H H 0.90 SSP 73 L H H 0.90 SSP 74 Q H H 0.90 SSP 75 Q C H 0.80 SSP 76 T C H 0.80 NP - Number of predicted residues PP - Percent of predicted residues Q3 - Residues predicted correctly (H, E, C) Qhelix - Residues predicted correctly (HELIX) Qstrand - Residues predicted correctly (STRAND) Qcoil - Residues predicted correctly (COIL) SOV - Segment overlap quantity Q3 Qhelix Qstrand Qcoil PP Qindex 69.4 70.7 0.0 66.7 100.0 ALL HELIX STRAND COIL PP SOV observed 78.0 80.5 100.0 73.2 100.0 Considered Percent predicted Percent predicted segments correctly as wrong type SEG 4 75.0 25.0 Number of wrong Number of wrong breaks joins B/J 0 0 CONFIDENCE (P) Average NP PP/BIN Q3 BIN 0.40 - 0.50 0.50 9 14.5 44.4 BIN 0.50 - 0.60 0.60 11 17.7 72.7 BIN 0.60 - 0.70 0.70 12 19.4 50.0 BIN 0.70 - 0.80 0.80 6 9.7 50.0 BIN 0.80 - 0.90 0.90 18 29.0 94.4 BIN 0.90 - 1.00 1.00 6 9.7 83.3 BIN 0.00 - 1.00 0.75 62 100.0 69.4 END of the results output