####################################################### # # # ACE # # # # Automated CASP Evaluator # # # # ----------------- 09/2001 # # # # by # # Adam Zemla # # # # Protein Structure Prediction Center # # Lawrence Livermore National Laboratory, CA # # # ####################################################### ########################## # # # ACE parameters: # # # ########################## SOV-METHOD 1 # 1 - SOV, 0 - SOV 94 # SS-DSSP-STRIDE 1 # 1 - DSSP, 2 - STRIDE (SS format only) SS-OUTPUT 1 # 1 - ON, 0 - OFF ########################## # # # ACE results: # # # ########################## # WARNING! The number of residues in SS section: 198 , MODEL 210 , TARGET 198 # The number of residues possible to evaluate: 188 # ERROR! (SS) Check residue P number 41. (In TARGET: # 41) SECONDARY STRUCTURE PREDICTION: NUM RES SS Prediction Probability SSP 12 D C H 0.60 SSP 13 A C H 0.80 SSP 14 L C H 0.90 SSP 15 V C H 0.90 SSP 16 R C H 0.90 SSP 17 L C H 0.80 SSP 18 A C H 0.80 SSP 19 R C H 0.80 SSP 20 E E H 0.10 SSP 21 R C C 0.20 SSP 22 F C C 0.80 SSP 23 D C C 0.90 SSP 24 L C C 0.90 SSP 25 P C C 0.60 SSP 26 D H H 0.10 SSP 27 Q H H 0.10 SSP 28 V H H 0.00 SSP 29 R H H 0.00 SSP 30 R C C 0.10 SSP 31 L C C 0.30 SSP 32 A C C 0.70 SSP 33 R C C 0.90 SSP 34 P C C 1.00 SSP 35 P C C 1.00 SSP 36 V C C 0.90 SSP 37 P C C 0.90 SSP 38 S C C 0.70 SSP 39 L C C 0.70 SSP 40 E C C 0.80 SSP 41 # C C 0.70 SSP 42 P C C 0.70 SSP 43 Y E E 0.20 SSP 44 G E E 0.50 SSP 45 L E E 0.60 SSP 46 R E E 0.60 SSP 47 V E E 0.20 SSP 48 A C C 0.30 SSP 49 Q C C 0.50 SSP 50 L H H 0.90 SSP 51 T H H 0.60 SSP 52 D H H 0.70 SSP 53 A H H 1.00 SSP 54 E H H 1.00 SSP 55 M H H 1.00 SSP 56 L H H 1.00 SSP 57 A H H 1.00 SSP 58 E H H 1.00 SSP 59 W H H 1.00 SSP 60 M H H 0.80 SSP 61 N C C 0.90 SSP 62 R C C 0.10 SSP 63 P H H 0.80 SSP 64 H H H 0.90 SSP 65 L H H 0.90 SSP 66 A H H 1.00 SSP 67 A H H 1.00 SSP 68 A H H 1.00 SSP 69 W H H 0.90 SSP 70 E C H 0.20 SSP 71 Y C C 0.60 SSP 72 D C C 0.90 SSP 73 W C C 0.90 SSP 74 P C C 0.90 SSP 75 A H H 0.90 SSP 76 S H H 0.90 SSP 77 R H H 1.00 SSP 78 W H H 1.00 SSP 79 R H H 1.00 SSP 80 Q H H 1.00 SSP 81 H H H 0.90 SSP 82 L H H 0.50 SSP 83 N H H 0.30 SSP 84 A H H 0.50 SSP 85 Q H H 0.50 SSP 86 L H C 0.70 SSP 87 E H C 0.80 SSP 88 G C C 0.80 SSP 89 T C C 0.80 SSP 90 Y C C 0.70 SSP 91 S E C 0.60 SSP 92 L E C 0.90 SSP 93 P E C 0.10 SSP 94 L E E 0.80 SSP 95 I E E 1.00 SSP 96 G E E 0.90 SSP 97 S E E 0.90 SSP 98 W E E 0.80 SSP 99 H C C 0.60 SSP 100 G C C 1.00 SSP 101 T E C 0.70 SSP 102 D E C 0.80 SSP 103 G E C 0.30 SSP 104 G E C 0.10 SSP 105 Y E E 0.00 SSP 106 L E E 0.10 SSP 107 E E E 0.10 SSP 108 L E E 0.10 SSP 109 Y E E 0.10 SSP 110 W E H 0.00 SSP 111 A H H 0.00 SSP 112 A H C 0.30 SSP 113 K H C 0.70 SSP 114 D E C 0.80 SSP 115 L H C 0.70 SSP 116 I H C 0.70 SSP 117 S H C 0.70 SSP 118 H H C 0.50 SSP 119 Y C C 0.90 SSP 120 Y C C 0.80 SSP 121 D C C 0.90 SSP 122 A C C 0.70 SSP 123 D C C 1.00 SSP 124 P C C 0.70 SSP 125 Y C C 0.50 SSP 126 D C C 0.10 SSP 127 L E H 0.00 SSP 128 G E H 0.00 SSP 129 L E H 0.40 SSP 130 H E H 0.90 SSP 131 A E H 0.90 SSP 132 A E H 0.90 SSP 133 I E H 0.20 SSP 134 A C C 0.60 SSP 135 D C C 0.90 SSP 136 L H C 0.10 SSP 137 S H C 0.10 SSP 138 K H C 0.00 SSP 139 V H C 0.00 SSP 140 N C C 0.20 SSP 141 R C C 0.60 SSP 142 G C C 0.20 SSP 143 F H H 0.50 SSP 144 G H H 0.80 SSP 145 P H H 0.70 SSP 146 L H H 0.80 SSP 147 L H H 0.90 SSP 148 L H H 1.00 SSP 149 P H H 1.00 SSP 150 R H H 1.00 SSP 151 I H H 1.00 SSP 152 V H H 0.90 SSP 153 A H H 0.90 SSP 154 S H H 0.90 SSP 155 V H H 0.70 SSP 156 F H H 0.30 SSP 157 A H C 0.10 SSP 158 N H C 0.90 SSP 159 E C C 1.00 SSP 160 P C C 0.80 SSP 161 R C C 0.90 SSP 162 C C C 0.70 SSP 163 R C C 0.70 SSP 164 R E E 0.80 SSP 165 I E E 0.80 SSP 166 M E E 0.90 SSP 167 F E E 0.60 SSP 168 D C C 0.80 SSP 169 P C C 0.90 SSP 170 D E C 1.00 SSP 171 H C C 0.90 SSP 172 R C C 1.00 SSP 173 N C C 0.20 SSP 174 T H H 1.00 SSP 175 A H H 1.00 SSP 176 T H H 1.00 SSP 177 R H H 0.90 SSP 178 R H H 0.90 SSP 179 L H H 0.80 SSP 180 C H H 0.50 SSP 181 E H H 0.00 SSP 182 W H H 0.90 SSP 183 A C H 0.10 SSP 184 G C C 0.20 SSP 185 C C C 0.50 SSP 186 K E E 0.30 SSP 187 F E E 0.80 SSP 188 L E E 0.20 SSP 189 G E C 0.10 SSP 190 E E C 0.60 SSP 191 H E C 0.60 SSP 192 D E C 0.80 SSP 193 T C C 1.00 SSP 194 T C C 0.90 SSP 195 N C H 0.50 SSP 196 R C H 0.80 SSP 197 R E H 0.80 SSP 198 M E H 0.80 SSP 199 A E H 0.80 SSP 200 L E H 0.50 SSP 201 Y E H 0.20 SSP 202 A E H 0.10 SSP 203 L E H 0.10 SSP 204 E E C 0.70 SSP 205 A C C 0.90 SSP 206 P C C 0.90 SSP 207 T C C 0.80 SSP 208 T C C 0.80 SSP 209 A C C 0.90 NP - Number of predicted residues PP - Percent of predicted residues Q3 - Residues predicted correctly (H, E, C) Qhelix - Residues predicted correctly (HELIX) Qstrand - Residues predicted correctly (STRAND) Qcoil - Residues predicted correctly (COIL) SOV - Segment overlap quantity Q3 Qhelix Qstrand Qcoil PP Qindex 72.9 81.5 43.8 84.0 94.9 ALL HELIX STRAND COIL PP SOV observed 73.9 86.9 50.0 77.9 94.9 Considered Percent predicted Percent predicted segments correctly as wrong type SEG 16 68.8 12.5 Number of wrong Number of wrong breaks joins B/J 0 0 CONFIDENCE (P) Average NP PP/BIN Q3 BIN 0.00 - 0.10 0.10 19 10.1 47.4 BIN 0.10 - 0.20 0.20 11 5.9 72.7 BIN 0.20 - 0.30 0.30 7 3.7 71.4 BIN 0.30 - 0.40 0.40 1 0.5 0.0 BIN 0.40 - 0.50 0.50 12 6.4 75.0 BIN 0.50 - 0.60 0.60 13 6.9 69.2 BIN 0.60 - 0.70 0.70 20 10.6 65.0 BIN 0.70 - 0.80 0.80 31 16.5 61.3 BIN 0.80 - 0.90 0.90 44 23.4 81.8 BIN 0.90 - 1.00 1.00 30 16.0 96.7 BIN 0.00 - 1.00 0.69 188 100.0 72.9 END of the results output