PFRMAT RR TARGET T0318 REMARK REMARK Your results are ready and may be viewed at: REMARK http://sbcweb.pdc.kth.se/cgi-bin/maccallr/gpcpred/results.pl?md5=86558f77bb3b3864bb58cf71999fa92a REMARK REMARK And the raw text format results are given below: REMARK REMARK Fully automated prediction METHOD GPCPRED by Bob MacCallum METHOD http://www.sbc.su.se/~maccallr/contactmaps/ METHOD Stockholm Bioinformatics Center, METHOD Stockholm University, Sweden. METHOD Predicts contacts >=8 residue separation. METHOD Predicts 1*Len contacts METHOD but is optimised for Len/10 contacts METHOD ------------- MODEL 1 MTQVLVRNGIQAVGDGLTSLIIVGKKSVLKNVTFEGKFKEVAQKFVTDGD SWNSMISRIPASGRHPLHYELAHLITVPDASSRGNTPTNAHSIYKELKPI NYPEDTKNVHFVLFAEYPDVLSHVAAIARTFCKFSMKTSGIRELNVNIDV VCDKLTNEDAVFLTDLSESVRETARLIDTPANILTTDALVDEAVKVGNAT GSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTEHIALV GKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHGFSQTLHA CLCIVENNVSPIANKPDDIIKMLSGKTVEINNTDAEGRLILADGVFYAKE TLKATTIFDMATLTGAQAWLSGRLHGAAMTNDEQLENEIIKAGKASGDLV APMLFAPDLFFGDLKSSIADMKNSNLGKMDGPPSAVAGLLIGAHIGFGEG LRWLHLDIAAPAEVGDRGTGYGPALFSTLLGKYTSVPMLKQ 236 248 0 8 1.000 220 233 0 8 0.998 236 250 0 8 0.996 220 234 0 8 0.994 330 339 0 8 0.992 223 234 0 8 0.990 223 236 0 8 0.988 223 233 0 8 0.986 236 249 0 8 0.984 234 248 0 8 0.982 220 236 0 8 0.980 339 358 0 8 0.978 330 340 0 8 0.976 204 220 0 8 0.974 234 250 0 8 0.971 223 248 0 8 0.969 322 339 0 8 0.967 302 319 0 8 0.965 206 220 0 8 0.963 289 300 0 8 0.961 221 234 0 8 0.959 440 456 0 8 0.957 440 454 0 8 0.955 221 233 0 8 0.953 363 378 0 8 0.951 302 339 0 8 0.949 319 339 0 8 0.947 342 358 0 8 0.945 236 247 0 8 0.943 248 256 0 8 0.941 221 236 0 8 0.939 212 220 0 8 0.937 340 358 0 8 0.935 289 302 0 8 0.933 234 249 0 8 0.931 328 339 0 8 0.929 223 250 0 8 0.927 220 248 0 8 0.925 233 248 0 8 0.923 339 363 0 8 0.921 363 379 0 8 0.919 222 233 0 8 0.916 342 363 0 8 0.914 222 234 0 8 0.912 289 298 0 8 0.910 222 236 0 8 0.908 286 300 0 8 0.906 340 363 0 8 0.904 302 322 0 8 0.902 458 473 0 8 0.900 440 458 0 8 0.898 42 57 0 8 0.896 302 330 0 8 0.894 330 342 0 8 0.892 236 255 0 8 0.890 233 250 0 8 0.888 223 249 0 8 0.886 320 339 0 8 0.884 363 371 0 8 0.882 345 358 0 8 0.880 341 358 0 8 0.878 236 256 0 8 0.876 456 473 0 8 0.874 340 348 0 8 0.872 358 378 0 8 0.870 330 341 0 8 0.868 370 378 0 8 0.866 288 300 0 8 0.864 221 248 0 8 0.862 220 250 0 8 0.859 302 328 0 8 0.857 57 93 0 8 0.855 304 319 0 8 0.853 286 298 0 8 0.851 322 340 0 8 0.849 285 300 0 8 0.847 289 301 0 8 0.845 339 348 0 8 0.843 286 302 0 8 0.841 304 339 0 8 0.839 328 340 0 8 0.837 193 220 0 8 0.833 207 220 0 8 0.831 234 247 0 8 0.829 322 330 0 8 0.827 319 340 0 8 0.825 219 234 0 8 0.823 305 339 0 8 0.821 219 233 0 8 0.817 421 437 0 8 0.815 233 249 0 8 0.813 236 254 0 8 0.811 222 248 0 8 0.809 57 75 0 8 0.807 220 249 0 8 0.804 300 319 0 8 0.802 437 456 0 8 0.800 301 339 0 8 0.798 437 454 0 8 0.796 204 233 0 8 0.794 358 379 0 8 0.792 204 223 0 8 0.790 283 300 0 8 0.788 371 379 0 8 0.786 204 234 0 8 0.784 285 302 0 8 0.782 363 376 0 8 0.780 221 250 0 8 0.778 341 363 0 8 0.776 302 340 0 8 0.774 285 298 0 8 0.772 288 302 0 8 0.770 286 301 0 8 0.768 358 371 0 8 0.766 204 217 0 8 0.764 370 379 0 8 0.762 202 220 0 8 0.760 206 234 0 8 0.758 290 300 0 8 0.756 57 76 0 8 0.754 301 319 0 8 0.752 300 339 0 8 0.747 222 250 0 8 0.745 223 247 0 8 0.741 219 236 0 8 0.739 288 298 0 8 0.737 304 322 0 8 0.735 289 304 0 8 0.733 197 220 0 8 0.729 193 206 0 8 0.727 204 212 0 8 0.725 363 375 0 8 0.723 348 358 0 8 0.721 346 358 0 8 0.719 212 234 0 8 0.717 206 233 0 8 0.715 304 330 0 8 0.713 363 377 0 8 0.711 217 234 0 8 0.709 224 234 0 8 0.707 320 340 0 8 0.705 319 330 0 8 0.703 206 223 0 8 0.701 345 363 0 8 0.699 458 476 0 8 0.697 330 358 0 8 0.695 340 356 0 8 0.692 42 55 0 8 0.690 217 236 0 8 0.688 220 247 0 8 0.686 305 319 0 8 0.684 204 236 0 8 0.682 206 236 0 8 0.678 224 236 0 8 0.674 224 233 0 8 0.672 204 219 0 8 0.670 234 255 0 8 0.668 358 370 0 8 0.666 290 302 0 8 0.664 221 249 0 8 0.662 283 298 0 8 0.660 302 320 0 8 0.658 300 322 0 8 0.656 378 400 0 8 0.654 456 476 0 8 0.652 340 357 0 8 0.650 283 302 0 8 0.648 438 456 0 8 0.646 421 440 0 8 0.644 212 236 0 8 0.642 34 57 0 8 0.640 5 20 0 8 0.637 339 357 0 8 0.635 204 221 0 8 0.633 454 473 0 8 0.631 304 328 0 8 0.629 421 435 0 8 0.627 20 57 0 8 0.625 285 301 0 8 0.623 361 378 0 8 0.621 57 77 0 8 0.619 290 298 0 8 0.615 339 356 0 8 0.613 301 330 0 8 0.611 41 57 0 8 0.609 322 342 0 8 0.607 302 313 0 8 0.605 206 217 0 8 0.603 302 341 0 8 0.601 288 301 0 8 0.599 300 330 0 8 0.597 57 90 0 8 0.595 223 255 0 8 0.593 217 233 0 8 0.591 322 341 0 8 0.589 323 339 0 8 0.587 304 340 0 8 0.585 458 471 0 8 0.582 184 193 0 8 0.580 378 392 0 8 0.578 358 376 0 8 0.576 42 56 0 8 0.574 437 458 0 8 0.570 212 233 0 8 0.568 438 454 0 8 0.566 302 314 0 8 0.564 206 219 0 8 0.562 282 300 0 8 0.560 234 256 0 8 0.558 302 342 0 8 0.556 184 220 0 8 0.554 219 248 0 8 0.550 200 220 0 8 0.548 445 456 0 8 0.546 379 400 0 8 0.544 206 221 0 8 0.542 222 249 0 8 0.540 305 330 0 8 0.538 223 256 0 8 0.536 339 378 0 8 0.534 23 57 0 8 0.532 320 330 0 8 0.530 456 471 0 8 0.527 346 363 0 8 0.525 286 304 0 8 0.523 314 339 0 8 0.521 193 204 0 8 0.519 378 389 0 8 0.517 301 322 0 8 0.515 305 340 0 8 0.511 421 438 0 8 0.509 458 480 0 8 0.505 328 341 0 8 0.503 189 220 0 8 0.501 348 363 0 8 0.499 302 311 0 8 0.497 220 255 0 8 0.495 167 189 0 8 0.493 319 342 0 8 0.491 301 328 0 8 0.489 458 479 0 8 0.487 358 366 0 8 0.485 358 375 0 8 0.483 212 223 0 8 0.481 319 328 0 8 0.479 379 392 0 8 0.477 283 301 0 8 0.475 38 57 0 8 0.468 193 202 0 8 0.462 238 248 0 8 0.458 247 255 0 8 0.456 301 340 0 8 0.454 447 456 0 8 0.452 421 454 0 8 0.450 333 341 0 8 0.448 319 341 0 8 0.446 339 371 0 8 0.444 29 57 0 8 0.440 328 342 0 8 0.438 440 453 0 8 0.436 220 256 0 8 0.434 212 221 0 8 0.432 445 454 0 8 0.430 57 65 0 8 0.428 424 437 0 8 0.426 300 328 0 8 0.424 273 283 0 8 0.422 224 248 0 8 0.420 207 234 0 8 0.418 234 254 0 8 0.415 55 93 0 8 0.413 57 71 0 8 0.411 313 339 0 8 0.409 290 301 0 8 0.407 238 250 0 8 0.405 342 357 0 8 0.403 340 371 0 8 0.401 193 223 0 8 0.399 330 363 0 8 0.397 456 479 0 8 0.393 289 339 0 8 0.391 301 309 0 8 0.387 342 356 0 8 0.379 223 254 0 8 0.377 456 480 0 8 0.375 233 247 0 8 0.373 193 212 0 8 0.371 285 304 0 8 0.367 219 250 0 8 0.365 57 69 0 8 0.363 302 321 0 8 0.360 221 247 0 8 0.358 305 328 0 8 0.356 421 436 0 8 0.354 177 189 0 8 0.352 184 206 0 8 0.350 340 360 0 8 0.348 193 217 0 8 0.346 339 379 0 8 0.344 320 341 0 8 0.342 173 189 0 8 0.340 207 236 0 8 0.338 217 248 0 8 0.336 204 248 0 8 0.334 206 248 0 8 0.332 300 340 0 8 0.328 421 456 0 8 0.326 204 222 0 8 0.324 305 322 0 8 0.322 358 377 0 8 0.320 236 251 0 8 0.318 193 233 0 8 0.316 289 305 0 8 0.314 360 378 0 8 0.312 282 298 0 8 0.310 458 475 0 8 0.308 392 400 0 8 0.305 189 206 0 8 0.303 273 285 0 8 0.301 57 79 0 8 0.299 438 458 0 8 0.297 273 300 0 8 0.295 226 236 0 8 0.293 379 389 0 8 0.289 207 223 0 8 0.287 378 386 0 8 0.285 342 378 0 8 0.283 288 304 0 8 0.279 193 234 0 8 0.277 196 220 0 8 0.275 224 250 0 8 0.273 207 233 0 8 0.271 369 378 0 8 0.269 20 55 0 8 0.267 298 339 0 8 0.265 364 378 0 8 0.263 342 371 0 8 0.261 226 234 0 8 0.259 23 55 0 8 0.257 456 464 0 8 0.255 339 360 0 8 0.253 273 286 0 8 0.251 289 319 0 8 0.246 304 320 0 8 0.244 439 456 0 8 0.242 197 206 0 8 0.240 282 302 0 8 0.238 302 335 0 8 0.236 341 357 0 8 0.234 5 21 0 8 0.232 333 342 0 8 0.230 459 473 0 8 0.228 363 392 0 8 0.226 5 23 0 8 0.224 5 22 0 8 0.222 320 328 0 8 0.220 331 339 0 8 0.218 97 126 0 8 0.216 238 249 0 8 0.214 361 379 0 8 0.212 23 56 0 8 0.210 189 202 0 8 0.208 345 357 0 8 0.202 300 309 0 8 0.200 20 29 0 8 0.198 212 248 0 8 0.196 220 254 0 8 0.193 193 219 0 8 0.187 56 93 0 8 0.185 273 282 0 8 0.183 323 340 0 8 0.179 206 222 0 8 0.177 341 356 0 8 0.175 340 378 0 8 0.173 273 298 0 8 0.171 304 341 0 8 0.169 367 378 0 8 0.167 57 68 0 8 0.165 339 370 0 8 0.163 217 250 0 8 0.161 456 475 0 8 0.159 440 473 0 8 0.157 363 389 0 8 0.155 435 454 0 8 0.153 304 342 0 8 0.151 363 386 0 8 0.149 247 256 0 8 0.147 309 339 0 8 0.145 202 212 0 8 0.143 189 204 0 8 0.141 184 204 0 8 0.138 57 66 0 8 0.136 22 57 0 8 0.132 363 385 0 8 0.130 439 454 0 8 0.126 454 476 0 8 0.124 167 177 0 8 0.122 34 55 0 8 0.118 286 305 0 8 0.116 204 250 0 8 0.114 57 88 0 8 0.112 424 435 0 8 0.110 363 400 0 8 0.106 206 250 0 8 0.104 20 56 0 8 0.102 184 202 0 8 0.100 193 236 0 8 0.098 331 340 0 8 0.096 202 234 0 8 0.094 167 184 0 8 0.092 167 176 0 8 0.090 366 378 0 8 0.088 344 358 0 8 0.086 339 376 0 8 0.084 435 456 0 8 0.081 233 255 0 8 0.079 57 97 0 8 0.075 207 221 0 8 0.073 445 458 0 8 0.071 59 93 0 8 0.069 301 320 0 8 0.067 263 283 0 8 0.065 301 341 0 8 0.061 304 314 0 8 0.059 41 55 0 8 0.057 345 378 0 8 0.055 342 379 0 8 0.053 320 342 0 8 0.051 207 217 0 8 0.049 424 440 0 8 0.047 272 286 0 8 0.045 272 283 0 8 0.043 97 127 0 8 0.041 421 439 0 8 0.039 304 313 0 8 0.035 305 341 0 8 0.033 202 223 0 8 0.031 193 221 0 8 0.029 330 348 0 8 0.026 272 282 0 8 0.022 283 304 0 8 0.018 223 235 0 8 0.016 227 236 0 8 0.014 340 379 0 8 0.012 47 57 0 8 0.010 20 34 0 8 0.008 330 345 0 8 0.006 57 78 0 8 0.004 219 249 0 8 0.002 END