PFRMAT AL TARGET T0320 REMARK FUGUE AUTOMATIC ALIGNMENT REMARK ZSCORE=3.14 REMARK CONFIDENCE: GUESS (50% confidence [ ZSCORE>=2.0 ]) REMARK DERIVED FROM HOMSTRAD PROFILE: hs1wy5a METHOD Environment-specific substitution tables were derived from the structure-based METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted METHOD into a scoring template (profile) using the environment-specific substitution METHOD tables and structure-dependent gap penalties. The program FUGUE searches METHOD a sequence or sequence alignment against the library of profiles. METHOD ------------- MODEL 4 PARENT 1wy5_A I 20 M 1 D 21 N 2 Q 22 P 3 K 23 E 4 S 24 S 5 Q 25 R 6 I 26 V 7 I 27 I 8 A 28 R 9 S 29 K 10 T 30 V 11 Q 31 L 12 E 32 A 13 A 33 L 14 I 34 Q 15 R 35 N 16 L 36 D 17 T 37 E 18 R 48 K 19 W 49 I 20 S 50 F 21 P 51 S 22 L 52 G 23 N 53 E 24 G 54 R 25 E 55 R 26 I 56 V 27 S 57 L 28 F 58 I 29 S 59 A 30 Y 60 F 31 N 61 S 32 G 62 G 33 G 63 G 34 K 64 V 35 D 65 D 36 C 66 S 37 Q 67 V 38 V 68 V 39 L 69 L 40 L 70 T 41 L 71 D 42 L 72 V 43 Y 73 L 44 L 74 L 45 S 75 K 46 C 76 L 47 L 77 K 48 W 78 L 53 E 79 K 54 Y 80 E 55 F 81 V 56 F 82 A 57 I 83 L 58 K 84 A 59 A 85 H 60 Q 86 F 61 N 87 N 62 S 88 R 66 Q 89 E 67 F 90 S 68 D 91 A 69 F 92 E 70 E 93 R 71 F 94 D 72 Q 95 E 73 S 96 E 74 F 97 F 75 P 98 C 76 M 99 K 77 Q 100 E 78 R 101 F 79 L 102 A 80 P 103 K 81 T 104 E 82 V 105 R 83 F 106 N 84 I 107 M 85 D 108 K 86 Q 109 I 87 E 110 F 88 E 111 V 89 T 112 G 90 F 113 K 91 P 114 E 92 T 115 D 93 L 116 V 94 E 117 R 95 N 118 A 96 F 119 F 97 V 120 A 98 L 121 K 99 E 122 E 100 T 123 N 101 S 124 R 102 E 125 M 103 R 126 S 104 Y 127 L 105 C 128 E 106 L 129 E 107 S 130 A 108 L 131 G 109 Y 132 R 110 E 133 F 111 S 134 L 112 Q 135 R 113 R 136 Y 114 Q 137 K 115 S 138 F 116 G 139 L 117 A 140 K 118 S 141 E 119 V 142 I 120 N 143 L 121 M 144 E 122 A 145 S 123 D 146 E 124 A 147 G 125 F 148 F 126 R 149 D 127 D 150 C 128 F 151 I 129 I 152 A 130 I 154 T 131 Y 155 A 132 P 156 H 133 E 157 H 134 T 158 L 135 E 159 N 136 A 160 D 137 I 161 L 138 V 162 L 139 I 163 E 140 G 164 T 141 I 165 S 142 R 166 L 143 H 167 L 144 T 168 F 145 D 169 F 146 P 170 T 147 F 171 R 148 G 172 G 149 E 173 T 150 A 174 G 151 L 175 L 152 K 176 D 153 P 177 G 154 I 178 L 155 Q 179 I 156 R 180 G 157 T 181 F 158 D 182 L 159 S 183 P 160 N 184 K 161 W 185 E 162 P 186 E 163 D 187 V 164 F 188 I 165 M 189 R 166 R 190 R 167 P 193 P 168 L 194 L 169 L 195 Y 170 H 196 Y 171 W 197 V 172 D 198 K 173 L 199 R 174 T 200 S 175 N 201 E 176 I 202 I 177 W 203 E 178 S 204 E 179 F 205 Y 180 L 206 A 181 L 207 K 182 Y 208 F 183 S 209 K 184 N 210 G 185 E 211 L 186 P 212 R 187 I 213 Y 195 C 214 E 196 G 215 V 197 L 216 S 198 Y 217 I 199 G 218 P 200 K 219 R 201 G 220 N 202 F 221 R 203 T 222 I 204 S 223 R 205 I 224 H 206 G 225 R 207 G 226 V 208 I 227 I 209 N 228 P 210 N 229 E 211 S 230 L 212 L 231 K 213 P 232 R 214 N 233 I 215 P 234 N 216 H 235 E 217 L 236 N 218 R 237 L 219 K 238 E 220 D 239 D 221 S 240 T 222 N 241 F 223 N 242 L 224 P 243 K 225 A 244 M 226 L 245 V 227 H 246 K 228 F 247 V 229 E 248 L 230 W 249 R 231 E 250 A 232 I 251 E 233 I 252 R 234 H 253 E 235 A 254 F 236 F 255 L 237 G 256 E 238 K 257 E 239 D 258 E 240 A 259 A 241 E 260 Q 242 G 261 K 243 E 262 L 244 R 263 Y 245 S 264 K 246 S 265 E 247 A 266 V 248 I 267 K 249 N 268 K 250 T 269 G 251 S 270 N 252 P 271 C 253 I 272 L 254 S 273 D 255 V 274 V 256 V 275 K 257 D 276 K 258 K 277 L 259 E 278 K 260 R 279 E 261 F 280 K 262 S 281 P 263 K 282 L 264 Y 283 A 265 H 284 L 266 D 285 Q 267 N 286 R 268 Y 287 R 269 Y 288 V 270 P 289 I 271 G 290 R 272 W 291 K 273 Y 292 F 274 L 293 I 275 V 294 G 276 D 295 E 277 D 296 K 278 T 297 D 279 L 298 Y 280 E 299 E 281 R 300 K 282 A 301 V 283 G 302 E 284 R 303 L 285 I 304 V 286 K 305 R 287 N 306 S 288 TER END