PFRMAT AL TARGET T0358 REMARK FUGUE AUTOMATIC ALIGNMENT REMARK ZSCORE=4.47 REMARK CONFIDENCE: LIKELY (95% confidence [ ZSCORE>=4.0 ]) REMARK DERIVED FROM HOMSTRAD PROFILE: hs1ztsa METHOD Environment-specific substitution tables were derived from the structure-based METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted METHOD into a scoring template (profile) using the environment-specific substitution METHOD tables and structure-dependent gap penalties. The program FUGUE searches METHOD a sequence or sequence alignment against the library of profiles. METHOD ------------- MODEL 5 PARENT 1zts_A M 1 L 64 T 2 S 65 Q 3 Q 66 S 4 F 67 V 5 Y 68 L 6 A 69 L 7 L 70 P 8 I 71 P 9 N 72 G 10 G 73 P 11 D 74 F 12 E 75 T 13 S 76 R 14 I 77 R 15 I 78 Q 16 K 79 A 17 G 80 Q 18 Y 81 A 19 T 82 D 31 T 83 D 32 E 84 Q 33 K 85 G 34 I 86 S 35 G 87 H 36 D 88 F 37 Y 89 R 38 S 90 L 39 Y 91 V 40 T 92 V 41 L 93 R 42 G 94 D 43 D 95 T 44 G 96 E 45 S 97 G 46 S 98 R 47 L 99 M 48 Q 100 V 49 K 101 W 50 P 102 R 51 D 103 A 52 V 104 W 53 Y 105 N 54 A 106 F 55 L 107 E 56 I 108 P 57 K 109 D 58 D 110 A 59 Y 111 G 60 V 112 E 61 K 113 G 62 P 114 L 63 A 115 N 64 D 116 R 65 P 117 Y 66 D 118 I 67 L 119 R 68 E 120 T 69 G 121 S 70 I 122 G 71 E 123 I 72 A 124 R 73 K 125 T 74 V 126 D 75 R 127 T 76 M 128 A 77 R 129 T 78 S 130 R 79 I 131 L 80 L 132 E 81 E 133 H 82 H 134 H 83 H 135 H 84 H 136 H 85 H 137 H 86 H 138 H 87 H 139 TER END