PFRMAT RR TARGET T0359 REMARK PPhdr from servers@predictioncenter.org REMARK PPhdr resp MAIL REMARK PPhdr orig HTML REMARK PPhdr want unk REMARK REMARK REMARK REMARK Result of ProfCon prediction REMARK ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ REMARK REMARK Marco Punta, Burkhard Rost REMARK "Toward Good 2D Predictions in Proteins", submitted REMARK REMARK ________________________________________________________________________________ REMARK REMARK REMARK REMARK REMARK REMARK Number of predicted pairs is equal to 2*L, L protein length REMARK Reference: Punta and Rost, Bioinformatics. 2005;21(13):2960-8 METHOD Feed Forward Neural Network with Back Propagation METHOD ------------- MODEL 1 SMSETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSI TKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH TGQTVLLTLMRRGETSV 37 59 0 8 0.94 21 35 0 8 0.92 10 35 0 8 0.92 78 85 0 8 0.92 19 37 0 8 0.92 52 59 0 8 0.91 11 17 0 8 0.91 38 59 0 8 0.91 10 19 0 8 0.91 10 17 0 8 0.90 59 78 0 8 0.90 10 18 0 8 0.90 66 74 0 8 0.90 59 87 0 8 0.90 40 59 0 8 0.90 40 57 0 8 0.90 11 18 0 8 0.89 37 58 0 8 0.89 7 21 0 8 0.89 78 87 0 8 0.89 19 38 0 8 0.89 36 59 0 8 0.89 39 58 0 8 0.89 10 87 0 8 0.89 20 37 0 8 0.89 74 87 0 8 0.89 46 52 0 8 0.89 22 35 0 8 0.89 2 91 0 8 0.89 59 77 0 8 0.88 52 58 0 8 0.88 10 36 0 8 0.88 5 24 0 8 0.88 59 66 0 8 0.88 21 37 0 8 0.88 77 85 0 8 0.88 8 87 0 8 0.88 11 19 0 8 0.88 8 21 0 8 0.88 21 36 0 8 0.88 1 91 0 8 0.88 17 40 0 8 0.88 75 87 0 8 0.87 38 58 0 8 0.87 40 58 0 8 0.87 78 84 0 8 0.87 40 52 0 8 0.87 8 20 0 8 0.87 3 41 0 8 0.87 11 35 0 8 0.87 3 39 0 8 0.87 22 36 0 8 0.87 6 23 0 8 0.86 8 89 0 8 0.86 59 89 0 8 0.86 2 41 0 8 0.86 35 59 0 8 0.86 61 74 0 8 0.86 4 91 0 8 0.86 19 59 0 8 0.86 20 38 0 8 0.86 11 34 0 8 0.86 5 23 0 8 0.86 59 74 0 8 0.86 18 37 0 8 0.86 3 90 0 8 0.86 3 91 0 8 0.86 23 35 0 8 0.86 1 79 0 8 0.86 38 52 0 8 0.86 6 24 0 8 0.86 2 79 0 8 0.85 78 86 0 8 0.85 10 34 0 8 0.85 12 18 0 8 0.85 7 20 0 8 0.85 39 57 0 8 0.85 77 87 0 8 0.85 59 88 0 8 0.85 6 89 0 8 0.85 37 60 0 8 0.85 5 39 0 8 0.85 5 90 0 8 0.85 40 87 0 8 0.85 24 36 0 8 0.85 24 35 0 8 0.85 19 36 0 8 0.85 34 90 0 8 0.85 35 52 0 8 0.85 17 89 0 8 0.85 10 85 0 8 0.85 9 20 0 8 0.85 23 36 0 8 0.85 10 59 0 8 0.85 7 24 0 8 0.85 36 52 0 8 0.85 9 19 0 8 0.85 1 80 0 8 0.85 6 40 0 8 0.85 20 36 0 8 0.85 35 89 0 8 0.85 8 19 0 8 0.85 38 57 0 8 0.84 2 90 0 8 0.84 37 87 0 8 0.84 9 35 0 8 0.84 79 85 0 8 0.84 7 38 0 8 0.84 5 91 0 8 0.84 1 39 0 8 0.84 19 40 0 8 0.84 35 78 0 8 0.84 19 35 0 8 0.84 8 35 0 8 0.84 10 20 0 8 0.84 40 85 0 8 0.84 74 85 0 8 0.84 10 37 0 8 0.84 8 40 0 8 0.84 1 90 0 8 0.84 34 91 0 8 0.84 20 35 0 8 0.84 40 46 0 8 0.84 5 22 0 8 0.84 6 25 0 8 0.84 39 52 0 8 0.83 40 78 0 8 0.83 8 37 0 8 0.83 46 53 0 8 0.83 40 86 0 8 0.83 22 34 0 8 0.83 33 91 0 8 0.83 40 74 0 8 0.83 6 22 0 8 0.83 17 74 0 8 0.83 75 85 0 8 0.83 21 59 0 8 0.83 35 90 0 8 0.83 61 89 0 8 0.83 7 22 0 8 0.83 59 86 0 8 0.83 9 87 0 8 0.83 11 20 0 8 0.83 59 75 0 8 0.83 18 39 0 8 0.83 18 40 0 8 0.83 5 40 0 8 0.83 37 52 0 8 0.83 17 39 0 8 0.83 20 34 0 8 0.83 10 52 0 8 0.83 36 61 0 8 0.82 21 34 0 8 0.82 33 90 0 8 0.82 8 36 0 8 0.82 36 58 0 8 0.82 2 40 0 8 0.82 8 38 0 8 0.82 9 18 0 8 0.82 11 36 0 8 0.82 40 56 0 8 0.82 20 39 0 8 0.82 31 91 0 8 0.82 21 87 0 8 0.82 17 78 0 8 0.82 21 38 0 8 0.82 19 74 0 8 0.82 5 88 0 8 0.82 36 89 0 8 0.82 12 35 0 8 0.82 23 34 0 8 0.82 25 35 0 8 0.82 7 40 0 8 0.82 20 59 0 8 0.82 52 78 0 8 0.82 6 21 0 8 0.82 7 23 0 8 0.82 8 59 0 8 0.82 37 89 0 8 0.81 61 75 0 8 0.81 35 61 0 8 0.81 58 78 0 8 0.81 18 38 0 8 0.81 2 78 0 8 0.81 36 90 0 8 0.81 36 87 0 8 0.81 52 77 0 8 0.81 35 75 0 8 0.81 7 39 0 8 0.81 11 57 0 8 0.81 36 78 0 8 0.81 19 52 0 8 0.81 52 87 0 8 0.81 38 86 0 8 0.81 END