####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 29 ( 436), selected 29 , name pdb1ctiA # Molecule2: number of CA atoms 24 ( 145), selected 24 , name T0709.pdb # PARAMETERS: -4 -ie -o1 -sia -d:4 -swap -gdc_sc 1ctiA.T0709.pdb # Search for Atom-Atom correspondence # Structure alignment analysis # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA R 1 - - - - - - - - - - LGA V 2 - - - - - - - - - - LGA C 3 - - - - - - - - - - LGA P 4 - - - - - - - - - - LGA R 5 - - - - - - - - - - LGA I 6 P 10 # - - - - - - - LGA L 7 P 11 0.385 2 0.280 0.353 2.391 75.909 48.831 - LGA M 8 L 12 0.528 3 0.055 0.066 0.583 90.909 55.682 - LGA E 9 T 13 0.303 2 0.045 0.045 0.449 100.000 71.429 - LGA C 10 C 14 0.316 0 0.055 0.163 0.840 90.909 93.939 0.234 LGA K 11 S 15 0.870 1 0.100 0.107 1.034 81.818 65.455 - LGA K 12 Q 16 0.567 4 0.023 0.026 0.810 90.909 49.495 - LGA D 13 D 17 0.607 2 0.115 0.737 3.097 86.364 55.682 - LGA S 14 S 18 1.234 1 0.096 0.106 1.767 69.545 54.848 - LGA D 15 D 19 0.858 2 0.089 0.669 1.655 77.727 55.455 - LGA C 16 C 20 0.980 0 0.068 0.185 2.620 81.818 67.576 2.620 LGA L 17 L 21 0.952 0 0.058 1.124 3.467 73.636 55.455 3.467 LGA A 18 A 22 2.009 0 0.245 0.332 4.088 54.091 44.364 - LGA E 19 G 23 1.718 0 0.171 0.171 3.026 50.455 50.455 - LGA C 20 C 24 0.955 0 0.052 0.249 1.470 73.636 73.636 1.470 LGA V 21 V 25 1.103 0 0.045 0.110 2.041 73.636 64.156 2.041 LGA C 22 C 26 0.786 0 0.123 0.166 1.019 81.818 79.091 0.780 LGA L 23 G 27 0.388 0 0.070 0.070 0.806 90.909 90.909 - LGA E 24 P 28 1.621 2 0.180 0.170 2.302 61.818 40.779 - LGA H 25 N 29 1.072 3 0.031 0.032 1.506 69.545 41.136 - LGA G 26 G 30 1.001 0 0.089 0.089 1.835 65.909 65.909 - LGA Y 27 F 31 0.614 6 0.043 0.047 0.714 90.909 40.496 - LGA C 28 C 32 0.481 0 0.048 0.643 2.046 95.455 83.636 2.046 LGA G 29 G 33 0.144 0 0.034 0.034 1.757 79.091 79.091 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 23 92 92 100.00 140 123 87.86 24 7 SUMMARY(RMSD_GDC): 0.967 1.002 1.253 75.284 59.479 52.727 #CA N1 N2 DIST N RMSD Seq_Id LGA_S LGA_Q SUMMARY(LGA) 29 24 4.0 23 0.97 56.52 96.126 2.156 Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.332901 * X + -0.596024 * Y + 0.730706 * Z + 8.410944 Y_new = -0.851530 * X + -0.522885 * Y + -0.038562 * Z + 8.663406 Z_new = 0.405059 * X + -0.609381 * Y + -0.681602 * Z + -2.743269 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.198121 -0.417044 -2.412078 [DEG: -68.6473 -23.8948 -138.2019 ] ZXZ: 1.518072 2.320746 2.554949 [DEG: 86.9791 132.9689 146.3878 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: pdb1ctiA REMARK 2: T0709.pdb REMARK Structure alignment analysis REMARK Search for Atom-Atom correspondence REMARK LGA parameters: -4 -ie -o1 -sia -d:4 -swap -gdc_sc 1ctiA.T0709.pdb REMARK #CA N1 N2 DIST N RMSD Seq_Id LGA_S REMARK SUMMARY: 29 24 4.0 23 0.97 56.52 96.126 REMARK ---------------------------------------------------------- MOLECULE pdb1ctiA ATOM 1 N ARG 1 -0.493 2.423 -2.719 1.00 0.00 N ATOM 2 CA ARG 1 0.209 3.098 -1.587 1.00 0.00 C ATOM 3 C ARG 1 1.279 2.178 -0.983 1.00 0.00 C ATOM 4 O ARG 1 1.843 2.463 0.060 1.00 0.00 O ATOM 5 CB ARG 1 -0.814 3.498 -0.510 1.00 0.00 C ATOM 6 CG ARG 1 -1.555 2.239 0.037 1.00 0.00 C ATOM 7 CD ARG 1 -2.925 2.622 0.627 1.00 0.00 C ATOM 8 NE ARG 1 -2.733 3.573 1.761 1.00 0.00 N ATOM 9 CZ ARG 1 -3.766 3.928 2.480 1.00 0.00 C ATOM 10 NH1 ARG 1 -4.575 3.000 2.916 1.00 0.00 N ATOM 11 NH2 ARG 1 -3.957 5.193 2.735 1.00 0.00 N ATOM 12 H1 ARG 1 -0.841 1.491 -2.410 1.00 0.00 H ATOM 13 H2 ARG 1 -1.299 3.002 -3.018 1.00 0.00 H ATOM 14 H3 ARG 1 0.160 2.314 -3.521 1.00 0.00 H ATOM 15 HA ARG 1 0.694 3.983 -1.966 1.00 0.00 H ATOM 16 HB2 ARG 1 -0.300 4.004 0.299 1.00 0.00 H ATOM 17 HB3 ARG 1 -1.518 4.193 -0.954 1.00 0.00 H ATOM 18 HG2 ARG 1 -1.721 1.517 -0.755 1.00 0.00 H ATOM 19 HG3 ARG 1 -0.960 1.767 0.808 1.00 0.00 H ATOM 20 HD2 ARG 1 -3.526 3.097 -0.136 1.00 0.00 H ATOM 21 HD3 ARG 1 -3.431 1.734 0.977 1.00 0.00 H ATOM 22 HE ARG 1 -1.843 3.929 1.964 1.00 0.00 H ATOM 23 HH11 ARG 1 -4.249 2.325 3.578 1.00 0.00 H ATOM 24 HH12 ARG 1 -5.519 2.966 2.589 1.00 0.00 H ATOM 25 HH21 ARG 1 -3.209 5.750 3.096 1.00 0.00 H ATOM 26 HH22 ARG 1 -4.853 5.607 2.570 1.00 0.00 H ATOM 27 N VAL 2 1.562 1.084 -1.652 1.00 0.00 N ATOM 28 CA VAL 2 2.613 0.153 -1.157 1.00 0.00 C ATOM 29 C VAL 2 3.964 0.749 -1.554 1.00 0.00 C ATOM 30 O VAL 2 4.437 0.652 -2.668 1.00 0.00 O ATOM 31 CB VAL 2 2.416 -1.251 -1.773 1.00 0.00 C ATOM 32 CG1 VAL 2 1.989 -1.123 -3.247 1.00 0.00 C ATOM 33 CG2 VAL 2 3.710 -2.107 -1.660 1.00 0.00 C ATOM 34 H VAL 2 1.096 0.878 -2.466 1.00 0.00 H ATOM 35 HA VAL 2 2.556 0.075 -0.066 1.00 0.00 H ATOM 36 HB VAL 2 1.631 -1.746 -1.226 1.00 0.00 H ATOM 37 HG11 VAL 2 2.662 -0.470 -3.775 1.00 0.00 H ATOM 38 HG12 VAL 2 2.001 -2.093 -3.716 1.00 0.00 H ATOM 39 HG13 VAL 2 0.991 -0.719 -3.306 1.00 0.00 H ATOM 40 HG21 VAL 2 4.129 -2.008 -0.668 1.00 0.00 H ATOM 41 HG22 VAL 2 3.488 -3.146 -1.848 1.00 0.00 H ATOM 42 HG23 VAL 2 4.443 -1.766 -2.382 1.00 0.00 H ATOM 43 N CYS 3 4.533 1.359 -0.582 1.00 0.00 N ATOM 44 CA CYS 3 5.881 2.002 -0.724 1.00 0.00 C ATOM 45 C CYS 3 6.745 1.715 0.522 1.00 0.00 C ATOM 46 O CYS 3 6.753 2.502 1.447 1.00 0.00 O ATOM 47 CB CYS 3 5.684 3.482 -0.860 1.00 0.00 C ATOM 48 SG CYS 3 7.169 4.458 -1.181 1.00 0.00 S ATOM 49 H CYS 3 4.043 1.384 0.256 1.00 0.00 H ATOM 50 HA CYS 3 6.375 1.681 -1.626 1.00 0.00 H ATOM 51 HB2 CYS 3 5.026 3.598 -1.687 1.00 0.00 H ATOM 52 HB3 CYS 3 5.199 3.865 0.022 1.00 0.00 H ATOM 53 N PRO 4 7.469 0.597 0.543 1.00 0.00 N ATOM 54 CA PRO 4 8.281 0.216 1.725 1.00 0.00 C ATOM 55 C PRO 4 9.087 1.412 2.276 1.00 0.00 C ATOM 56 O PRO 4 9.439 2.316 1.545 1.00 0.00 O ATOM 57 CB PRO 4 9.175 -0.950 1.211 1.00 0.00 C ATOM 58 CG PRO 4 8.449 -1.522 -0.048 1.00 0.00 C ATOM 59 CD PRO 4 7.546 -0.379 -0.580 1.00 0.00 C ATOM 60 HA PRO 4 7.602 -0.138 2.494 1.00 0.00 H ATOM 61 HB2 PRO 4 10.162 -0.582 0.936 1.00 0.00 H ATOM 62 HB3 PRO 4 9.291 -1.715 1.975 1.00 0.00 H ATOM 63 HG2 PRO 4 9.170 -1.836 -0.803 1.00 0.00 H ATOM 64 HG3 PRO 4 7.840 -2.381 0.224 1.00 0.00 H ATOM 65 HD2 PRO 4 7.990 0.100 -1.438 1.00 0.00 H ATOM 66 HD3 PRO 4 6.541 -0.695 -0.834 1.00 0.00 H ATOM 67 N ARG 5 9.367 1.380 3.557 1.00 0.00 N ATOM 68 CA ARG 5 10.058 2.529 4.206 1.00 0.00 C ATOM 69 C ARG 5 11.528 2.644 3.764 1.00 0.00 C ATOM 70 O ARG 5 12.409 2.068 4.370 1.00 0.00 O ATOM 71 CB ARG 5 9.974 2.296 5.741 1.00 0.00 C ATOM 72 CG ARG 5 10.164 3.626 6.526 1.00 0.00 C ATOM 73 CD ARG 5 8.874 4.488 6.514 1.00 0.00 C ATOM 74 NE ARG 5 8.943 5.488 7.627 1.00 0.00 N ATOM 75 CZ ARG 5 8.826 5.091 8.869 1.00 0.00 C ATOM 76 NH1 ARG 5 7.635 4.975 9.387 1.00 0.00 N ATOM 77 NH2 ARG 5 9.910 4.820 9.546 1.00 0.00 N ATOM 78 H ARG 5 9.118 0.604 4.099 1.00 0.00 H ATOM 79 HA ARG 5 9.543 3.443 3.942 1.00 0.00 H ATOM 80 HB2 ARG 5 9.013 1.861 5.974 1.00 0.00 H ATOM 81 HB3 ARG 5 10.733 1.580 6.047 1.00 0.00 H ATOM 82 HG2 ARG 5 10.427 3.400 7.550 1.00 0.00 H ATOM 83 HG3 ARG 5 10.979 4.189 6.086 1.00 0.00 H ATOM 84 HD2 ARG 5 8.787 5.023 5.578 1.00 0.00 H ATOM 85 HD3 ARG 5 7.993 3.874 6.648 1.00 0.00 H ATOM 86 HE ARG 5 9.075 6.438 7.425 1.00 0.00 H ATOM 87 HH11 ARG 5 6.881 5.529 9.034 1.00 0.00 H ATOM 88 HH12 ARG 5 7.475 4.333 10.136 1.00 0.00 H ATOM 89 HH21 ARG 5 10.575 5.541 9.734 1.00 0.00 H ATOM 90 HH22 ARG 5 10.071 3.890 9.877 1.00 0.00 H ATOM 91 N ILE 6 11.765 3.392 2.700 1.00 0.00 N ATOM 92 CA ILE 6 13.177 3.642 2.210 1.00 0.00 C ATOM 93 C ILE 6 13.349 5.123 1.917 1.00 0.00 C ATOM 94 O ILE 6 12.428 5.808 1.525 1.00 0.00 O ATOM 95 CB ILE 6 13.426 2.841 0.923 1.00 0.00 C ATOM 96 CG1 ILE 6 13.220 1.349 1.273 1.00 0.00 C ATOM 97 CG2 ILE 6 14.860 3.082 0.368 1.00 0.00 C ATOM 98 CD1 ILE 6 13.504 0.434 0.065 1.00 0.00 C ATOM 99 H ILE 6 11.010 3.788 2.217 1.00 0.00 H ATOM 100 HA ILE 6 13.909 3.349 2.960 1.00 0.00 H ATOM 101 HB ILE 6 12.709 3.144 0.185 1.00 0.00 H ATOM 102 HG12 ILE 6 13.875 1.078 2.094 1.00 0.00 H ATOM 103 HG13 ILE 6 12.193 1.209 1.590 1.00 0.00 H ATOM 104 HG21 ILE 6 15.048 4.131 0.201 1.00 0.00 H ATOM 105 HG22 ILE 6 15.597 2.702 1.061 1.00 0.00 H ATOM 106 HG23 ILE 6 14.977 2.591 -0.581 1.00 0.00 H ATOM 107 HD11 ILE 6 13.056 0.847 -0.828 1.00 0.00 H ATOM 108 HD12 ILE 6 14.569 0.328 -0.083 1.00 0.00 H ATOM 109 HD13 ILE 6 13.090 -0.549 0.243 1.00 0.00 H ATOM 110 N LEU 7 14.563 5.578 2.123 1.00 0.00 N ATOM 111 CA LEU 7 14.933 7.014 1.889 1.00 0.00 C ATOM 112 C LEU 7 15.920 7.127 0.705 1.00 0.00 C ATOM 113 O LEU 7 17.120 7.069 0.894 1.00 0.00 O ATOM 114 CB LEU 7 15.615 7.529 3.181 1.00 0.00 C ATOM 115 CG LEU 7 14.590 7.974 4.261 1.00 0.00 C ATOM 116 CD1 LEU 7 13.792 9.244 3.807 1.00 0.00 C ATOM 117 CD2 LEU 7 13.623 6.818 4.645 1.00 0.00 C ATOM 118 H LEU 7 15.240 4.952 2.442 1.00 0.00 H ATOM 119 HA LEU 7 14.065 7.615 1.656 1.00 0.00 H ATOM 120 HB2 LEU 7 16.227 6.732 3.585 1.00 0.00 H ATOM 121 HB3 LEU 7 16.264 8.372 2.966 1.00 0.00 H ATOM 122 HG LEU 7 15.169 8.228 5.141 1.00 0.00 H ATOM 123 HD11 LEU 7 14.421 9.900 3.222 1.00 0.00 H ATOM 124 HD12 LEU 7 12.928 8.982 3.212 1.00 0.00 H ATOM 125 HD13 LEU 7 13.442 9.793 4.671 1.00 0.00 H ATOM 126 HD21 LEU 7 14.156 5.878 4.681 1.00 0.00 H ATOM 127 HD22 LEU 7 13.188 7.006 5.620 1.00 0.00 H ATOM 128 HD23 LEU 7 12.821 6.740 3.935 1.00 0.00 H ATOM 129 N MET 8 15.387 7.290 -0.486 1.00 0.00 N ATOM 130 CA MET 8 16.249 7.529 -1.717 1.00 0.00 C ATOM 131 C MET 8 15.732 8.767 -2.454 1.00 0.00 C ATOM 132 O MET 8 14.568 9.105 -2.353 1.00 0.00 O ATOM 133 CB MET 8 16.232 6.298 -2.651 1.00 0.00 C ATOM 134 CG MET 8 14.837 6.013 -3.244 1.00 0.00 C ATOM 135 SD MET 8 14.752 4.741 -4.534 1.00 0.00 S ATOM 136 CE MET 8 15.178 5.792 -5.958 1.00 0.00 C ATOM 137 H MET 8 14.417 7.253 -0.572 1.00 0.00 H ATOM 138 HA MET 8 17.278 7.730 -1.434 1.00 0.00 H ATOM 139 HB2 MET 8 16.930 6.452 -3.461 1.00 0.00 H ATOM 140 HB3 MET 8 16.559 5.433 -2.090 1.00 0.00 H ATOM 141 HG2 MET 8 14.189 5.717 -2.437 1.00 0.00 H ATOM 142 HG3 MET 8 14.419 6.910 -3.672 1.00 0.00 H ATOM 143 HE1 MET 8 16.153 6.231 -5.803 1.00 0.00 H ATOM 144 HE2 MET 8 15.190 5.196 -6.858 1.00 0.00 H ATOM 145 HE3 MET 8 14.447 6.581 -6.062 1.00 0.00 H ATOM 146 N GLU 9 16.594 9.419 -3.192 1.00 0.00 N ATOM 147 CA GLU 9 16.164 10.652 -3.931 1.00 0.00 C ATOM 148 C GLU 9 15.351 10.310 -5.189 1.00 0.00 C ATOM 149 O GLU 9 15.412 9.208 -5.694 1.00 0.00 O ATOM 150 CB GLU 9 17.414 11.486 -4.306 1.00 0.00 C ATOM 151 CG GLU 9 18.384 11.642 -3.069 1.00 0.00 C ATOM 152 CD GLU 9 19.618 10.728 -3.200 1.00 0.00 C ATOM 153 OE1 GLU 9 20.276 10.865 -4.219 1.00 0.00 O ATOM 154 OE2 GLU 9 19.825 9.950 -2.285 1.00 0.00 O ATOM 155 H GLU 9 17.517 9.103 -3.257 1.00 0.00 H ATOM 156 HA GLU 9 15.548 11.245 -3.288 1.00 0.00 H ATOM 157 HB2 GLU 9 17.921 11.009 -5.142 1.00 0.00 H ATOM 158 HB3 GLU 9 17.084 12.465 -4.647 1.00 0.00 H ATOM 159 HG2 GLU 9 18.737 12.666 -2.996 1.00 0.00 H ATOM 160 HG3 GLU 9 17.884 11.403 -2.132 1.00 0.00 H ATOM 161 N CYS 10 14.601 11.284 -5.659 1.00 0.00 N ATOM 162 CA CYS 10 13.786 11.103 -6.912 1.00 0.00 C ATOM 163 C CYS 10 13.588 12.474 -7.586 1.00 0.00 C ATOM 164 O CYS 10 13.872 13.505 -7.009 1.00 0.00 O ATOM 165 CB CYS 10 12.409 10.489 -6.549 1.00 0.00 C ATOM 166 SG CYS 10 11.523 11.127 -5.104 1.00 0.00 S ATOM 167 H CYS 10 14.569 12.138 -5.186 1.00 0.00 H ATOM 168 HA CYS 10 14.313 10.447 -7.608 1.00 0.00 H ATOM 169 HB2 CYS 10 11.745 10.578 -7.403 1.00 0.00 H ATOM 170 HB3 CYS 10 12.556 9.433 -6.365 1.00 0.00 H ATOM 171 N LYS 11 13.107 12.442 -8.813 1.00 0.00 N ATOM 172 CA LYS 11 12.807 13.685 -9.609 1.00 0.00 C ATOM 173 C LYS 11 11.306 13.707 -9.942 1.00 0.00 C ATOM 174 O LYS 11 10.679 14.746 -9.895 1.00 0.00 O ATOM 175 CB LYS 11 13.689 13.712 -10.893 1.00 0.00 C ATOM 176 CG LYS 11 13.778 12.313 -11.581 1.00 0.00 C ATOM 177 CD LYS 11 15.023 12.215 -12.476 1.00 0.00 C ATOM 178 CE LYS 11 15.084 10.822 -13.108 1.00 0.00 C ATOM 179 NZ LYS 11 16.340 10.667 -13.891 1.00 0.00 N ATOM 180 H LYS 11 12.954 11.579 -9.238 1.00 0.00 H ATOM 181 HA LYS 11 13.007 14.570 -9.018 1.00 0.00 H ATOM 182 HB2 LYS 11 13.278 14.434 -11.593 1.00 0.00 H ATOM 183 HB3 LYS 11 14.685 14.048 -10.619 1.00 0.00 H ATOM 184 HG2 LYS 11 13.827 11.520 -10.856 1.00 0.00 H ATOM 185 HG3 LYS 11 12.915 12.155 -12.192 1.00 0.00 H ATOM 186 HD2 LYS 11 14.970 12.966 -13.250 1.00 0.00 H ATOM 187 HD3 LYS 11 15.907 12.382 -11.879 1.00 0.00 H ATOM 188 HE2 LYS 11 15.057 10.068 -12.333 1.00 0.00 H ATOM 189 HE3 LYS 11 14.235 10.684 -13.762 1.00 0.00 H ATOM 190 HZ1 LYS 11 16.477 11.502 -14.494 1.00 0.00 H ATOM 191 HZ2 LYS 11 17.146 10.576 -13.238 1.00 0.00 H ATOM 192 HZ3 LYS 11 16.277 9.815 -14.484 1.00 0.00 H ATOM 193 N LYS 12 10.757 12.556 -10.269 1.00 0.00 N ATOM 194 CA LYS 12 9.262 12.431 -10.489 1.00 0.00 C ATOM 195 C LYS 12 8.754 11.208 -9.737 1.00 0.00 C ATOM 196 O LYS 12 9.514 10.351 -9.332 1.00 0.00 O ATOM 197 CB LYS 12 8.914 12.312 -11.988 1.00 0.00 C ATOM 198 CG LYS 12 9.720 11.198 -12.659 1.00 0.00 C ATOM 199 CD LYS 12 9.245 11.012 -14.118 1.00 0.00 C ATOM 200 CE LYS 12 10.170 10.040 -14.858 1.00 0.00 C ATOM 201 NZ LYS 12 9.801 9.966 -16.300 1.00 0.00 N ATOM 202 H LYS 12 11.333 11.772 -10.371 1.00 0.00 H ATOM 203 HA LYS 12 8.740 13.295 -10.084 1.00 0.00 H ATOM 204 HB2 LYS 12 7.863 12.114 -12.116 1.00 0.00 H ATOM 205 HB3 LYS 12 9.121 13.239 -12.461 1.00 0.00 H ATOM 206 HG2 LYS 12 10.748 11.457 -12.663 1.00 0.00 H ATOM 207 HG3 LYS 12 9.612 10.299 -12.099 1.00 0.00 H ATOM 208 HD2 LYS 12 8.234 10.631 -14.130 1.00 0.00 H ATOM 209 HD3 LYS 12 9.263 11.968 -14.624 1.00 0.00 H ATOM 210 HE2 LYS 12 11.193 10.382 -14.778 1.00 0.00 H ATOM 211 HE3 LYS 12 10.091 9.057 -14.421 1.00 0.00 H ATOM 212 HZ1 LYS 12 8.767 10.015 -16.398 1.00 0.00 H ATOM 213 HZ2 LYS 12 10.235 10.761 -16.812 1.00 0.00 H ATOM 214 HZ3 LYS 12 10.144 9.069 -16.700 1.00 0.00 H ATOM 215 N ASP 13 7.474 11.161 -9.558 1.00 0.00 N ATOM 216 CA ASP 13 6.874 10.029 -8.806 1.00 0.00 C ATOM 217 C ASP 13 7.238 8.672 -9.437 1.00 0.00 C ATOM 218 O ASP 13 7.736 7.773 -8.770 1.00 0.00 O ATOM 219 CB ASP 13 5.345 10.239 -8.813 1.00 0.00 C ATOM 220 CG ASP 13 4.966 11.414 -7.896 1.00 0.00 C ATOM 221 OD1 ASP 13 5.838 12.243 -7.680 1.00 0.00 O ATOM 222 OD2 ASP 13 3.825 11.419 -7.466 1.00 0.00 O ATOM 223 H ASP 13 6.907 11.879 -9.918 1.00 0.00 H ATOM 224 HA ASP 13 7.254 10.047 -7.802 1.00 0.00 H ATOM 225 HB2 ASP 13 5.021 10.470 -9.810 1.00 0.00 H ATOM 226 HB3 ASP 13 4.834 9.350 -8.487 1.00 0.00 H ATOM 227 N SER 14 7.008 8.566 -10.712 1.00 0.00 N ATOM 228 CA SER 14 7.260 7.267 -11.406 1.00 0.00 C ATOM 229 C SER 14 8.750 6.895 -11.356 1.00 0.00 C ATOM 230 O SER 14 9.162 5.919 -11.950 1.00 0.00 O ATOM 231 CB SER 14 6.807 7.388 -12.870 1.00 0.00 C ATOM 232 OG SER 14 7.678 8.340 -13.421 1.00 0.00 O ATOM 233 H SER 14 6.682 9.339 -11.211 1.00 0.00 H ATOM 234 HA SER 14 6.688 6.493 -10.919 1.00 0.00 H ATOM 235 HB2 SER 14 6.917 6.449 -13.388 1.00 0.00 H ATOM 236 HB3 SER 14 5.791 7.742 -12.932 1.00 0.00 H ATOM 237 HG SER 14 8.267 8.582 -12.730 1.00 0.00 H ATOM 238 N ASP 15 9.531 7.674 -10.649 1.00 0.00 N ATOM 239 CA ASP 15 10.990 7.378 -10.554 1.00 0.00 C ATOM 240 C ASP 15 11.258 6.105 -9.740 1.00 0.00 C ATOM 241 O ASP 15 12.104 5.315 -10.107 1.00 0.00 O ATOM 242 CB ASP 15 11.684 8.566 -9.879 1.00 0.00 C ATOM 243 CG ASP 15 13.198 8.332 -9.845 1.00 0.00 C ATOM 244 OD1 ASP 15 13.745 8.183 -10.925 1.00 0.00 O ATOM 245 OD2 ASP 15 13.719 8.314 -8.742 1.00 0.00 O ATOM 246 H ASP 15 9.166 8.452 -10.186 1.00 0.00 H ATOM 247 HA ASP 15 11.394 7.251 -11.550 1.00 0.00 H ATOM 248 HB2 ASP 15 11.482 9.470 -10.435 1.00 0.00 H ATOM 249 HB3 ASP 15 11.318 8.681 -8.868 1.00 0.00 H ATOM 250 N CYS 16 10.541 5.915 -8.648 1.00 0.00 N ATOM 251 CA CYS 16 10.819 4.710 -7.763 1.00 0.00 C ATOM 252 C CYS 16 9.989 3.490 -8.206 1.00 0.00 C ATOM 253 O CYS 16 9.205 3.554 -9.130 1.00 0.00 O ATOM 254 CB CYS 16 10.520 5.095 -6.297 1.00 0.00 C ATOM 255 SG CYS 16 11.906 5.750 -5.346 1.00 0.00 S ATOM 256 H CYS 16 9.823 6.550 -8.411 1.00 0.00 H ATOM 257 HA CYS 16 11.869 4.437 -7.826 1.00 0.00 H ATOM 258 HB2 CYS 16 9.737 5.838 -6.294 1.00 0.00 H ATOM 259 HB3 CYS 16 10.161 4.240 -5.739 1.00 0.00 H ATOM 260 N LEU 17 10.207 2.394 -7.504 1.00 0.00 N ATOM 261 CA LEU 17 9.475 1.113 -7.795 1.00 0.00 C ATOM 262 C LEU 17 8.097 1.141 -7.110 1.00 0.00 C ATOM 263 O LEU 17 7.696 2.129 -6.523 1.00 0.00 O ATOM 264 CB LEU 17 10.346 -0.092 -7.238 1.00 0.00 C ATOM 265 CG LEU 17 10.764 -1.086 -8.368 1.00 0.00 C ATOM 266 CD1 LEU 17 11.919 -0.490 -9.192 1.00 0.00 C ATOM 267 CD2 LEU 17 11.218 -2.427 -7.768 1.00 0.00 C ATOM 268 H LEU 17 10.865 2.410 -6.779 1.00 0.00 H ATOM 269 HA LEU 17 9.315 1.029 -8.868 1.00 0.00 H ATOM 270 HB2 LEU 17 11.239 0.304 -6.762 1.00 0.00 H ATOM 271 HB3 LEU 17 9.802 -0.641 -6.467 1.00 0.00 H ATOM 272 HG LEU 17 9.922 -1.270 -9.021 1.00 0.00 H ATOM 273 HD11 LEU 17 11.640 0.485 -9.562 1.00 0.00 H ATOM 274 HD12 LEU 17 12.796 -0.393 -8.566 1.00 0.00 H ATOM 275 HD13 LEU 17 12.147 -1.136 -10.024 1.00 0.00 H ATOM 276 HD21 LEU 17 12.003 -2.255 -7.046 1.00 0.00 H ATOM 277 HD22 LEU 17 10.382 -2.901 -7.275 1.00 0.00 H ATOM 278 HD23 LEU 17 11.585 -3.077 -8.547 1.00 0.00 H ATOM 279 N ALA 18 7.405 0.029 -7.206 1.00 0.00 N ATOM 280 CA ALA 18 6.076 -0.107 -6.535 1.00 0.00 C ATOM 281 C ALA 18 5.194 1.128 -6.772 1.00 0.00 C ATOM 282 O ALA 18 5.307 1.784 -7.787 1.00 0.00 O ATOM 283 CB ALA 18 6.310 -0.308 -5.034 1.00 0.00 C ATOM 284 H ALA 18 7.766 -0.721 -7.726 1.00 0.00 H ATOM 285 HA ALA 18 5.569 -0.973 -6.934 1.00 0.00 H ATOM 286 HB1 ALA 18 7.034 -1.096 -4.881 1.00 0.00 H ATOM 287 HB2 ALA 18 6.683 0.605 -4.593 1.00 0.00 H ATOM 288 HB3 ALA 18 5.383 -0.582 -4.553 1.00 0.00 H ATOM 289 N GLU 19 4.333 1.421 -5.824 1.00 0.00 N ATOM 290 CA GLU 19 3.420 2.605 -5.952 1.00 0.00 C ATOM 291 C GLU 19 4.023 3.815 -5.204 1.00 0.00 C ATOM 292 O GLU 19 3.293 4.673 -4.747 1.00 0.00 O ATOM 293 CB GLU 19 2.063 2.196 -5.319 1.00 0.00 C ATOM 294 CG GLU 19 0.911 3.076 -5.856 1.00 0.00 C ATOM 295 CD GLU 19 0.602 2.704 -7.313 1.00 0.00 C ATOM 296 OE1 GLU 19 0.040 1.636 -7.489 1.00 0.00 O ATOM 297 OE2 GLU 19 0.951 3.507 -8.164 1.00 0.00 O ATOM 298 H GLU 19 4.285 0.859 -5.021 1.00 0.00 H ATOM 299 HA GLU 19 3.267 2.866 -7.007 1.00 0.00 H ATOM 300 HB2 GLU 19 1.867 1.158 -5.556 1.00 0.00 H ATOM 301 HB3 GLU 19 2.108 2.285 -4.239 1.00 0.00 H ATOM 302 HG2 GLU 19 0.024 2.928 -5.261 1.00 0.00 H ATOM 303 HG3 GLU 19 1.196 4.116 -5.813 1.00 0.00 H ATOM 304 N CYS 20 5.338 3.879 -5.080 1.00 0.00 N ATOM 305 CA CYS 20 5.941 5.037 -4.365 1.00 0.00 C ATOM 306 C CYS 20 5.763 6.294 -5.200 1.00 0.00 C ATOM 307 O CYS 20 5.658 6.256 -6.408 1.00 0.00 O ATOM 308 CB CYS 20 7.447 4.790 -4.137 1.00 0.00 C ATOM 309 SG CYS 20 7.921 3.616 -2.854 1.00 0.00 S ATOM 310 H CYS 20 5.922 3.181 -5.437 1.00 0.00 H ATOM 311 HA CYS 20 5.453 5.177 -3.414 1.00 0.00 H ATOM 312 HB2 CYS 20 7.884 4.464 -5.060 1.00 0.00 H ATOM 313 HB3 CYS 20 7.920 5.721 -3.874 1.00 0.00 H ATOM 314 N VAL 21 5.742 7.394 -4.494 1.00 0.00 N ATOM 315 CA VAL 21 5.661 8.741 -5.140 1.00 0.00 C ATOM 316 C VAL 21 6.712 9.652 -4.518 1.00 0.00 C ATOM 317 O VAL 21 7.167 9.414 -3.419 1.00 0.00 O ATOM 318 CB VAL 21 4.262 9.326 -4.930 1.00 0.00 C ATOM 319 CG1 VAL 21 3.245 8.467 -5.675 1.00 0.00 C ATOM 320 CG2 VAL 21 3.902 9.312 -3.444 1.00 0.00 C ATOM 321 H VAL 21 5.775 7.324 -3.522 1.00 0.00 H ATOM 322 HA VAL 21 5.871 8.675 -6.194 1.00 0.00 H ATOM 323 HB VAL 21 4.228 10.339 -5.305 1.00 0.00 H ATOM 324 HG11 VAL 21 3.507 8.418 -6.716 1.00 0.00 H ATOM 325 HG12 VAL 21 3.242 7.466 -5.264 1.00 0.00 H ATOM 326 HG13 VAL 21 2.266 8.902 -5.570 1.00 0.00 H ATOM 327 HG21 VAL 21 4.618 9.879 -2.891 1.00 0.00 H ATOM 328 HG22 VAL 21 2.924 9.746 -3.307 1.00 0.00 H ATOM 329 HG23 VAL 21 3.897 8.296 -3.078 1.00 0.00 H ATOM 330 N CYS 22 7.065 10.687 -5.237 1.00 0.00 N ATOM 331 CA CYS 22 8.150 11.624 -4.750 1.00 0.00 C ATOM 332 C CYS 22 7.531 12.681 -3.802 1.00 0.00 C ATOM 333 O CYS 22 6.760 13.519 -4.227 1.00 0.00 O ATOM 334 CB CYS 22 8.861 12.270 -5.961 1.00 0.00 C ATOM 335 SG CYS 22 10.573 12.803 -5.727 1.00 0.00 S ATOM 336 H CYS 22 6.599 10.854 -6.087 1.00 0.00 H ATOM 337 HA CYS 22 8.897 11.067 -4.203 1.00 0.00 H ATOM 338 HB2 CYS 22 8.894 11.543 -6.759 1.00 0.00 H ATOM 339 HB3 CYS 22 8.288 13.118 -6.311 1.00 0.00 H ATOM 340 N LEU 23 7.885 12.610 -2.535 1.00 0.00 N ATOM 341 CA LEU 23 7.296 13.525 -1.500 1.00 0.00 C ATOM 342 C LEU 23 7.974 14.903 -1.480 1.00 0.00 C ATOM 343 O LEU 23 8.828 15.206 -2.291 1.00 0.00 O ATOM 344 CB LEU 23 7.492 12.859 -0.119 1.00 0.00 C ATOM 345 CG LEU 23 6.860 11.458 -0.024 1.00 0.00 C ATOM 346 CD1 LEU 23 7.061 10.944 1.420 1.00 0.00 C ATOM 347 CD2 LEU 23 5.358 11.502 -0.363 1.00 0.00 C ATOM 348 H LEU 23 8.543 11.953 -2.254 1.00 0.00 H ATOM 349 HA LEU 23 6.248 13.686 -1.693 1.00 0.00 H ATOM 350 HB2 LEU 23 8.543 12.738 0.066 1.00 0.00 H ATOM 351 HB3 LEU 23 7.066 13.494 0.644 1.00 0.00 H ATOM 352 HG LEU 23 7.368 10.790 -0.707 1.00 0.00 H ATOM 353 HD11 LEU 23 6.660 11.655 2.130 1.00 0.00 H ATOM 354 HD12 LEU 23 6.553 10.005 1.552 1.00 0.00 H ATOM 355 HD13 LEU 23 8.116 10.809 1.615 1.00 0.00 H ATOM 356 HD21 LEU 23 4.882 12.327 0.147 1.00 0.00 H ATOM 357 HD22 LEU 23 5.224 11.619 -1.421 1.00 0.00 H ATOM 358 HD23 LEU 23 4.877 10.580 -0.066 1.00 0.00 H ATOM 359 N GLU 24 7.541 15.712 -0.539 1.00 0.00 N ATOM 360 CA GLU 24 8.094 17.091 -0.375 1.00 0.00 C ATOM 361 C GLU 24 9.622 17.132 -0.396 1.00 0.00 C ATOM 362 O GLU 24 10.215 17.989 -1.020 1.00 0.00 O ATOM 363 CB GLU 24 7.561 17.684 0.960 1.00 0.00 C ATOM 364 CG GLU 24 7.790 19.206 0.996 1.00 0.00 C ATOM 365 CD GLU 24 6.850 19.900 0.009 1.00 0.00 C ATOM 366 OE1 GLU 24 5.665 19.629 0.114 1.00 0.00 O ATOM 367 OE2 GLU 24 7.367 20.660 -0.791 1.00 0.00 O ATOM 368 H GLU 24 6.822 15.413 0.056 1.00 0.00 H ATOM 369 HA GLU 24 7.748 17.673 -1.201 1.00 0.00 H ATOM 370 HB2 GLU 24 6.504 17.468 1.044 1.00 0.00 H ATOM 371 HB3 GLU 24 8.063 17.239 1.816 1.00 0.00 H ATOM 372 HG2 GLU 24 7.595 19.582 1.991 1.00 0.00 H ATOM 373 HG3 GLU 24 8.814 19.430 0.731 1.00 0.00 H ATOM 374 N HIS 25 10.224 16.204 0.276 1.00 0.00 N ATOM 375 CA HIS 25 11.709 16.154 0.353 1.00 0.00 C ATOM 376 C HIS 25 12.290 15.762 -1.003 1.00 0.00 C ATOM 377 O HIS 25 13.473 15.509 -1.124 1.00 0.00 O ATOM 378 CB HIS 25 12.107 15.105 1.405 1.00 0.00 C ATOM 379 CG HIS 25 11.276 15.326 2.671 1.00 0.00 C ATOM 380 ND1 HIS 25 11.445 16.287 3.487 1.00 0.00 N ATOM 381 CD2 HIS 25 10.213 14.599 3.194 1.00 0.00 C ATOM 382 CE1 HIS 25 10.598 16.210 4.452 1.00 0.00 C ATOM 383 NE2 HIS 25 9.791 15.175 4.321 1.00 0.00 N ATOM 384 H HIS 25 9.702 15.543 0.722 1.00 0.00 H ATOM 385 HA HIS 25 12.090 17.125 0.640 1.00 0.00 H ATOM 386 HB2 HIS 25 11.931 14.102 1.033 1.00 0.00 H ATOM 387 HB3 HIS 25 13.155 15.210 1.649 1.00 0.00 H ATOM 388 HD1 HIS 25 12.129 16.981 3.400 1.00 0.00 H ATOM 389 HD2 HIS 25 9.795 13.699 2.760 1.00 0.00 H ATOM 390 HE1 HIS 25 10.551 16.916 5.265 1.00 0.00 H ATOM 391 N GLY 26 11.443 15.709 -1.992 1.00 0.00 N ATOM 392 CA GLY 26 11.915 15.323 -3.339 1.00 0.00 C ATOM 393 C GLY 26 12.367 13.869 -3.316 1.00 0.00 C ATOM 394 O GLY 26 12.880 13.375 -4.295 1.00 0.00 O ATOM 395 H GLY 26 10.501 15.916 -1.849 1.00 0.00 H ATOM 396 HA2 GLY 26 11.111 15.440 -4.049 1.00 0.00 H ATOM 397 HA3 GLY 26 12.746 15.953 -3.632 1.00 0.00 H ATOM 398 N TYR 27 12.204 13.217 -2.172 1.00 0.00 N ATOM 399 CA TYR 27 12.584 11.755 -2.032 1.00 0.00 C ATOM 400 C TYR 27 11.314 10.889 -2.073 1.00 0.00 C ATOM 401 O TYR 27 10.228 11.381 -1.885 1.00 0.00 O ATOM 402 CB TYR 27 13.287 11.514 -0.676 1.00 0.00 C ATOM 403 CG TYR 27 14.599 12.320 -0.474 1.00 0.00 C ATOM 404 CD1 TYR 27 15.176 13.166 -1.471 1.00 0.00 C ATOM 405 CD2 TYR 27 15.276 12.196 0.766 1.00 0.00 C ATOM 406 CE1 TYR 27 16.381 13.855 -1.225 1.00 0.00 C ATOM 407 CE2 TYR 27 16.485 12.887 1.008 1.00 0.00 C ATOM 408 CZ TYR 27 17.044 13.720 0.011 1.00 0.00 C ATOM 409 OH TYR 27 18.225 14.393 0.241 1.00 0.00 O ATOM 410 H TYR 27 11.839 13.691 -1.398 1.00 0.00 H ATOM 411 HA TYR 27 13.229 11.440 -2.838 1.00 0.00 H ATOM 412 HB2 TYR 27 12.605 11.763 0.123 1.00 0.00 H ATOM 413 HB3 TYR 27 13.531 10.465 -0.591 1.00 0.00 H ATOM 414 HD1 TYR 27 14.719 13.291 -2.419 1.00 0.00 H ATOM 415 HD2 TYR 27 14.861 11.565 1.537 1.00 0.00 H ATOM 416 HE1 TYR 27 16.800 14.487 -1.993 1.00 0.00 H ATOM 417 HE2 TYR 27 16.988 12.778 1.956 1.00 0.00 H ATOM 418 HH TYR 27 18.901 13.742 0.441 1.00 0.00 H ATOM 419 N CYS 28 11.486 9.610 -2.328 1.00 0.00 N ATOM 420 CA CYS 28 10.309 8.674 -2.394 1.00 0.00 C ATOM 421 C CYS 28 9.793 8.316 -1.003 1.00 0.00 C ATOM 422 O CYS 28 10.531 8.342 -0.037 1.00 0.00 O ATOM 423 CB CYS 28 10.760 7.399 -3.109 1.00 0.00 C ATOM 424 SG CYS 28 11.296 7.589 -4.814 1.00 0.00 S ATOM 425 H CYS 28 12.384 9.261 -2.480 1.00 0.00 H ATOM 426 HA CYS 28 9.517 9.126 -2.958 1.00 0.00 H ATOM 427 HB2 CYS 28 11.578 6.968 -2.551 1.00 0.00 H ATOM 428 HB3 CYS 28 9.948 6.683 -3.111 1.00 0.00 H ATOM 429 N GLY 29 8.521 7.996 -0.924 1.00 0.00 N ATOM 430 CA GLY 29 7.961 7.569 0.394 1.00 0.00 C ATOM 431 C GLY 29 8.568 6.240 0.854 1.00 0.00 C ATOM 432 O GLY 29 9.338 5.695 0.082 1.00 0.00 O ATOM 433 OXT GLY 29 8.225 5.847 1.958 1.00 0.00 O ATOM 434 H GLY 29 7.932 8.052 -1.724 1.00 0.00 H ATOM 435 HA2 GLY 29 8.181 8.320 1.135 1.00 0.00 H ATOM 436 HA3 GLY 29 6.891 7.458 0.305 1.00 0.00 H END