
PFRMAT FRV1
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++
AUTHOR 1017-7609-1967 A.GODZIK
AUTHOR 1017-7609-1967 THE SCRIPPS RESEARCH INSITITUTE
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++
REMARK PREDICTIONS ARE BASED ON AN EXTENSION OF THE METHOD
REMARK ORIGINALLY DESCRIBED IN JMB, 227:227-238 (1992)
REMARK MODIFICATIONS INCLUDE:
REMARK                        ADDITIONAL LOCAL ENERGY TERMS
REMARK                        MODIFIED GAP HANDLING
REMARK ALL MODIFICATIONS ARE DESCRIBED IN AN UPCOMING PUBLICATION
REMARK L.JAROSZEWSKI & A.GODZIK "EVALUATION OF THREADING ALIGNMENTS"
REMARK AVAILABLE UPON REQUEST

REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++++
SEQRES T0004 AEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIR
SEQRES T0004 LSIKEATEQSQPAA
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++++
TSCORE T0004 0  0.3     1FGV H 0
TSCORE T0004 0  0.5     1BOV A 0
TSCORE T0004 0  0.2     1HSA B 0
TSCORE T0004 0  0.0     1FNA - 0
TSCORE T0004 0  0.0     1AAK - 0
TSCORE T0004 0  0.0     1ACO - 0
TSCORE T0004 0  0.0     1JHL H 0
TSCORE T0004 0  0.0     1OPA A 0
TSCORE T0004 0  0.0     1SGC - 0
TSCORE T0004 0  0.0     1CMS - 0
TSCORE T0004 0  0.0     1LBA - 0
TSCORE T0004 0  0.0     1HYP - 0
TSCORE T0004 0  0.0     1AIZ A 0
TSCORE T0004 0  0.0     2BBK H 0
TSCORE T0004 0  0.0     1CDG - 0
TSCORE T0004 0  0.0     1TON - 0
TSCORE T0004 0  0.0     1COB A 0
TSCORE T0004 0  0.0     1GP1 A 0
TSCORE T0004 0  0.0     1GPR - 0
TSCORE T0004 0  0.0     1PAZ - 0
TSCORE T0004 0  0.0     1PLC - 0
TSCORE T0004 0  0.0     1CAU A 0
TSCORE T0004 0  0.0     1BIA - 0
TSCORE T0004 0  0.0     1FXD - 0
TSCORE T0004 0  0.0     1CHB D 0
TSCORE T0004 0  0.0     1MVP A 0
TSCORE T0004 0  0.0     2BBK L 0
TSCORE T0004 0  0.0     1TEN - 0
TSCORE T0004 0  0.0     3ICB - 0
TSCORE T0004 0  0.0     1PTS A 0
TSCORE T0004 0  0.0     1AAP A 0
TSCORE T0004 0  0.0     1AYH - 0
TSCORE T0004 0  0.0     1AOZ A 0
TSCORE T0004 0  0.0     1FAS - 0
TSCORE T0004 0  0.0     1ICM - 0
TSCORE T0004 0  0.0     1AAR A 0
TSCORE T0004 0  0.0     1BRP - 0
TSCORE T0004 0  0.0     2APR - 0
TSCORE T0004 0  0.0     1BBP A 0
TSCORE T0004 0  0.0     1RAA B 0
TSCORE T0004 0  0.0     1PCA - 0
TSCORE T0004 0  0.0     1CGI I 0
TSCORE T0004 0  0.0     1AAJ - 0
TSCORE T0004 0  0.0     1YEA - 0
TSCORE T0004 0  0.0     1PLF A 0
TSCORE T0004 0  0.0     1GIG L 0
TSCORE T0004 0  0.0     3BCL - 0
TSCORE T0004 0  0.0     1RAA A 0
TSCORE T0004 0  0.0     1STF I 0
TSCORE T0004 0  0.0     1CCR - 0
TSCORE T0004 0  0.0     1FHA - 0
TSCORE T0004 0  0.0     2POR - 0
TSCORE T0004 0  0.0     1AAQ A 0
TSCORE T0004 0  0.0     1OVA A 0
TSCORE T0004 0  0.0     1LDM - 0
TSCORE T0004 0  0.0     1SHG - 0
TSCORE T0004 0  0.0     2PIA - 0
TSCORE T0004 0  0.0     1FCB A 0
TSCORE T0004 0  0.0     1CAA - 0
TSCORE T0004 0  0.0     1MDC - 0
TSCORE T0004 0  0.0     1MFA - 0
TSCORE T0004 0  0.0     1BGH - 0
TSCORE T0004 0  0.0     1AAL A 0
TSCORE T0004 0  0.0     1BSR A 0
TSCORE T0004 0  0.0     1ITH A 0
TSCORE T0004 0  0.0     1GOF - 0
TSCORE T0004 0  0.0     1LEC - 0
TSCORE T0004 0  0.0     1CPC A 0
TSCORE T0004 0  0.0     3AAH A 0
TSCORE T0004 0  0.0     1ARB - 0
TSCORE T0004 0  0.0     1POH - 0
TSCORE T0004 0  0.0     6RXN - 0
TSCORE T0004 0  0.0     1HNE E 0
TSCORE T0004 0  0.0     1NAR - 0
TSCORE T0004 0  0.0     1RCB - 0
TSCORE T0004 0  0.0     1SIL - 0
TSCORE T0004 0  0.0     1BBH A 0
TSCORE T0004 0  0.0     3RP2 A 0
TSCORE T0004 0  0.0     1PKR - 0
TSCORE T0004 0  0.0     1THG - 0
TSCORE T0004 0  0.0     2CCY A 0
TSCORE T0004 0  0.0     1GD1 O 0
TSCORE T0004 0  0.0     1SHF A 0
TSCORE T0004 0  0.0     2LAL B 0
TSCORE T0004 0  0.0     4SGB I 0
TSCORE T0004 0  0.0     1PER L 0
TSCORE T0004 0  0.0     1GOA - 0
TSCORE T0004 0  0.0     1POC - 0
TSCORE T0004 0  0.0     1NCO A 0
TSCORE T0004 0  0.0     1MUP - 0
TSCORE T0004 0  0.0     1SHA A 0
TSCORE T0004 0  0.0     1ABK - 0
TSCORE T0004 0  0.0     1HIB - 0
TSCORE T0004 0  0.0     1HUW - 0
TSCORE T0004 0  0.0     1ARP - 0
TSCORE T0004 0  0.0     1F3G - 0
TSCORE T0004 0  0.0     2BB2 - 0
TSCORE T0004 0  0.0     1PPA - 0
TSCORE T0004 0  0.0     2CTX - 0
TSCORE T0004 0  0.0     1POW A 0
TSCORE T0004 0  0.0     1TPL A 0
TSCORE T0004 0  0.0     3AAH B 0
TSCORE T0004 0  0.0     1ACB E 0
TSCORE T0004 0  0.0     1APM E 0
TSCORE T0004 0  0.0     1CEW I 0
TSCORE T0004 0  0.0     1HMY - 0
TSCORE T0004 0  0.0     1ROP A 0
TSCORE T0004 0  0.0     1LTE - 0
TSCORE T0004 0  0.0     2MCM - 0
TSCORE T0004 0  0.0     1ABM A 0
TSCORE T0004 0  0.0     1CDT A 0
TSCORE T0004 0  0.0     1PP2 R 0
TSCORE T0004 0  0.0     1FUS - 0
TSCORE T0004 0  0.0     1CBN - 0
TSCORE T0004 0  0.0     1CBX - 0
TSCORE T0004 0  0.0     2AAA - 0
TSCORE T0004 0  0.0     1TIE - 0
TSCORE T0004 0  0.0     3LAD A 0
TSCORE T0004 0  0.0     1WGC A 0
TSCORE T0004 0  0.0     1CDP - 0
TSCORE T0004 0  0.0     1DTX - 0
TSCORE T0004 0  0.0     1UTG - 0
TSCORE T0004 0  0.0     1AKE A 0
TSCORE T0004 0  0.0     1PYA A 0
TSCORE T0004 0  0.0     1APA - 0
TSCORE T0004 0  0.0     1BBC - 0
TSCORE T0004 0  0.0     1MAT - 0
TSCORE T0004 0  0.0     1PPT - 0
TSCORE T0004 0  0.0     2PSG - 0
TSCORE T0004 0  0.0     1PRC H 0
TSCORE T0004 0  0.0     1CHO I 0
TSCORE T0004 0  0.0     1BP2 - 0
TSCORE T0004 0  0.0     1SGT - 0
TSCORE T0004 0  0.0     2C2C - 0
TSCORE T0004 0  0.0     1HSA A 0
TSCORE T0004 0  0.0     132L - 0
TSCORE T0004 0  0.0     1DFN A 0
TSCORE T0004 0  0.0     1PFK A 0
TSCORE T0004 0  0.0     1EDB - 0
TSCORE T0004 0  0.0     2SIC I 0
TSCORE T0004 0  0.0     1CPT - 0
TSCORE T0004 0  0.0     1PPO - 0
TSCORE T0004 0  0.0     2LIV - 0
TSCORE T0004 0  0.0     2DNJ A 0
TSCORE T0004 0  0.0     1BAS - 0
TSCORE T0004 0  0.0     1END - 0
TSCORE T0004 0  0.0     1C2R A 0
TSCORE T0004 0  0.0     1MPP - 0
TSCORE T0004 0  0.0     2POL A 0
TSCORE T0004 0  0.0     1FKB - 0
TSCORE T0004 0  0.0     1PII - 0
TSCORE T0004 0  0.0     3DFR - 0
TSCORE T0004 0  0.0     ABOP - 0
TSCORE T0004 0  0.0     1CHM A 0
TSCORE T0004 0  0.0     1HLE B 0
TSCORE T0004 0  0.0     1COY - 0
TSCORE T0004 0  0.0     1HPI - 0
TSCORE T0004 0  0.0     1PDA - 0
TSCORE T0004 0  0.0     1PYD A 0
TSCORE T0004 0  0.0     1CPC B 0
TSCORE T0004 0  0.0     1PK4 - 0
TSCORE T0004 0  0.0     2GST A 0
TSCORE T0004 0  0.0     1ISU A 0
TSCORE T0004 0  0.0     1BLL E 0
TSCORE T0004 0  0.0     1LIS - 0
TSCORE T0004 0  0.0     1ABI H 0
TSCORE T0004 0  0.0     1COA I 0
TSCORE T0004 0  0.0     1ONC - 0
TSCORE T0004 0  0.0     2FX2 - 0
TSCORE T0004 0  0.0     1ZAA C 0
TSCORE T0004 0  0.0     1AEC - 0
TSCORE T0004 0  0.0     1BTC - 0
TSCORE T0004 0  0.0     1GDH A 0
TSCORE T0004 0  0.0     2SAS - 0
TSCORE T0004 0  0.0     1MBL A 0
TSCORE T0004 0  0.0     1PGD - 0
TSCORE T0004 0  0.0     2MHR - 0
TSCORE T0004 0  0.0     1CAU B 0
TSCORE T0004 0  0.0     1CRL - 0
TSCORE T0004 0  0.0     2CMD - 0
TSCORE T0004 0  0.0     1DHF A 0
TSCORE T0004 0  0.0     1ABE - 0
TSCORE T0004 0  0.0     1EZM - 0
TSCORE T0004 0  0.0     1GLT - 0
TSCORE T0004 0  0.0     1APH B 0
TSCORE T0004 0  0.0     1HMD A 0
TSCORE T0004 0  0.0     2SCP A 0
TSCORE T0004 0  0.0     1PRC M 0
TSCORE T0004 0  0.0     1TFG - 0
TSCORE T0004 0  0.0     1DHR - 0
TSCORE T0004 0  0.0     1DHI A 0
TSCORE T0004 0  0.0     1CCA - 0
TSCORE T0004 0  0.0     1FIA A 0
TSCORE T0004 0  0.0     1FRR A 0
TSCORE T0004 0  0.0     1MBA - 0
TSCORE T0004 0  0.0     1ACB I 0
TSCORE T0004 0  0.0     1TML - 0
TSCORE T0004 0  0.0     1LLD A 0
TSCORE T0004 0  0.0     1GAL - 0
TSCORE T0004 0  0.0     1GOX - 0
TSCORE T0004 0  0.0     1MYT - 0
TSCORE T0004 0  0.0     1LGA A 0
TSCORE T0004 0  0.0     1ECA - 0
TSCORE T0004 0  0.0     1RDS - 0
TSCORE T0004 0  0.0     1DSB A 0
TSCORE T0004 0  0.0     1HLE A 0
TSCORE T0004 0  0.0     1CIA - 0
TSCORE T0004 0  0.0     1GRA - 0
TSCORE T0004 0  0.0     1BLC - 0
TSCORE T0004 0  0.0     1REC - 0
TSCORE T0004 0  0.0     3ICD - 0
TSCORE T0004 0  0.0     1YPI A 0
TSCORE T0004 0  0.0     1LLA - 0
TSCORE T0004 0  0.0     AECA - 0
TSCORE T0004 0  0.0     1GMP A 0
TSCORE T0004 0  0.0     1BAB B 0
TSCORE T0004 0  0.0     1GKY - 0
TSCORE T0004 0  0.0     2FCR - 0
TSCORE T0004 0  0.0     1GCA - 0
TSCORE T0004 0  0.0     1MRR A 0
TSCORE T0004 0  0.0     1PBX B 0
TSCORE T0004 0  0.0     2MTA C 0
TSCORE T0004 0  0.0     256B A 0
TSCORE T0004 0  0.0     1MSB A 0
TSCORE T0004 0  0.0     1TEC E 0
TSCORE T0004 0  0.0     1TRO A 0
TSCORE T0004 0  0.0     1PYA B 0
TSCORE T0004 0  0.0     1FLV - 0
TSCORE T0004 0  0.0     1BAB A 0
TSCORE T0004 0  0.0     1PRC L 0
TSCORE T0004 0  0.0     1SBP - 0
TSCORE T0004 0  0.0     2LHB - 0
TSCORE T0004 0  0.0     2CSC - 0
TSCORE T0004 0  0.0     3ADK - 0
TSCORE T0004 0  0.0     1PBX A 0
TSCORE T0004 0  0.0     1FBA A 0
TSCORE T0004 0  0.0     1PRC C 0
TSCORE T0004 0  0.0     3TGL - 0
TSCORE T0004 0  0.0     1COL A 0
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++++
TALIGN T0004 0    1    8        1FGV H 0          2    9      1.0    1
TALIGN T0004 0    9   10        1FGV H 0         12   13      1.0    1
TALIGN T0004 0   11   12        1FGV H 0         15   16      1.0    1
TALIGN T0004 0   13   13        1FGV H 0         20   20      1.0    1
TALIGN T0004 0   15   16        1FGV H 0         21   22      1.0    1
TALIGN T0004 0   17   18        1FGV H 0         24   25      1.0    1
TALIGN T0004 0   19   21        1FGV H 0         27   29      1.0    1
TALIGN T0004 0   22   22        1FGV H 0         34   34      1.0    1
TALIGN T0004 0   23   25        1FGV H 0         36   38      1.0    1
TALIGN T0004 0   26   31        1FGV H 0         40   45      1.0    1
TALIGN T0004 0   32   36        1FGV H 0         48   52      1.0    1
TALIGN T0004 0   38   43        1FGV H 0         53   58      1.0    1
TALIGN T0004 0   45   50        1FGV H 0         59   64      1.0    1
TALIGN T0004 0   54   56        1FGV H 0         65   67      1.0    1
TALIGN T0004 0   58   60        1FGV H 0         68   70      1.0    1
TALIGN T0004 0   62   63        1FGV H 0         71   72      1.0    1
TALIGN T0004 0   64   79        1FGV H 0         74   89      1.0    1
TALIGN T0004 0   83   84        1FGV H 0         90   91      1.0    1
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++++
TALIGN T0004 0    2    5        1BOV A 0          1    4      1.0    1
TALIGN T0004 0    8    8        1BOV A 0          5    5      1.0    1
TALIGN T0004 0   10   16        1BOV A 0          6   12      1.0    1
TALIGN T0004 0   17   19        1BOV A 0         20   22      1.0    1
TALIGN T0004 0   22   23        1BOV A 0         23   24      1.0    1
TALIGN T0004 0   31   69        1BOV A 0         25   63      1.0    1
TALIGN T0004 0   71   76        1BOV A 0         64   69      1.0    1
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++++
TALIGN T0004 0    1   24        1HSA B 0          5   28      1.0    1
TALIGN T0004 0   27   40        1HSA B 0         29   42      1.0    1
TALIGN T0004 0   41   49        1HSA B 0         44   52      1.0    1
TALIGN T0004 0   50   61        1HSA B 0         54   65      1.0    1
TALIGN T0004 0   62   74        1HSA B 0         69   81      1.0    1
TALIGN T0004 0   75   84        1HSA B 0         83   92      1.0    1
REMARK +++++++++++++++++++++++++++++++++++++++++++++++++++++++


