
PFRMAT FRV1
AUTHOR 6776-3217-5205 M J E Sternberg
AUTHOR 6776-3217-5205 Imperial Cancer Research Fund
AUTHOR 6776-3217-5205 m.sternberg@icrf.icnet.uk
AUTHOR 6776-3217-5205 Details of all workers see below
REMARK ======================================================================
REMARK Threading results from FOLDFIT:
REMARK 
REMARK Work by Michael J E Sternberg (1), Paul A Bates (1), Andrew Lyall (2)
REMARK Robert B Russell (1), Mansoor A S Saqi (2) and Roger Sayle (2)
REMARK (1) Biomolecular Modelling Laboratory
REMARK Imperial Cancer Research Fund
REMARK Lincoln Inn Fields, London, WC2A 3PX, UK
REMARK Tel +44 - 171 - 269- 3565
REMARK Fax +44 - 171 - 269 - 3479
REMARK URL http://bonsai.lif.icnet.uk
REMARK E-mail m.sternberg@icrf.icnet.uk
REMARK E-mail p.bates@icrf.icnet.uk 
REMARK E-mail r.russell@icrf.icnet.uk
REMARK (2) Bioinformatics Group
REMARK Glaxo Medicines Research Centre
REMARK Gunnels Wood Road
REMARK Stevenage, Herts, SG1 2NY, UK
REMARK Tel +44 -1438 - 745745
REMARK Tel +44 -1438 - 763082
REMARK E-mail al28044@ggr.co.uk
REMARK E-mail mass15599@ggr.co.uk
REMARK E-mail ras32425@ggr.co.uk
REMARK ======================================================================
REMARK                       FOLDFIT
REMARK                       =======
REMARK The program was jointly and equally developed by the above two groups .
REMARK The program matches the (1) sequence, (2) predicted secondary structure
REMARK and (3) predicted burial of the unknown sequence
REMARK against a database of known structures detailing
REMARK (1) sequence, (2) actual and predicted secondary structure
REMARK and (3) actual and predicted burial.
REMARK The matches are scored by matrices empirically derived
REMARK from comparison of analogous and distantly homologous protein folds.
REMARK Searching is by a type I dynamic programming algorithm
REMARK with afine secondary-structure dependant gap penalties.
REMARK ======================================================================
REMARK ======================================================================
REMARK T0014 study
REMARK ======================================================================
REMARK
REMARK (1) A consensus secondary structure assignment from multiply
REMARK aligned homologous sequences was made using results of DSC (King
REMARK & Sternberg, T0014 CASP Submission) PHD (Rost & Sander), SOPMA
REMARK (Geourjon & Deleage), NNPREDICT (Kneller, Harris & Cohen), 
REMARK together with visual inspection.  A consensus prediction of 
REMARK secondary structure, together with  accessibilities from PHD 
REMARK was used as input to FOLDFIT.
REMARK 
REMARK (2) T0014 was scanned by FOLDFIT and  the rank order of the PDB 
REMARK codes matched by FOLDFIT are listed below in decreasing order of 
REMARK probability.
REMARK 
REMARK (3) The top four scoring structures were identified as probable
REMARK candidates for the fold of T0014.  The probabilities 
REMARK for the 4 hits reflect the order of matches, though 
REMARK the actual probability values chosen subjectively.
REMARK A higher probability was assigned to the top scoring hit, becuase
REMARK it had a distinct separation from the second ranked match. Viz.,
REMARK 
REMARK    ID       Score    Len1 Len2
REMARK   1ubsA0    4135.0    253 258
REMARK   1tml-0    4002.0    253 287
REMARK   1xyzA0    3896.0    253 321
REMARK   1nipB0    3867.0    253 288
REMARK   1dri-0    3824.0    253 272
REMARK   1ads-0    3794.0    253 316
REMARK   1nal10    3765.0    253 292
REMARK   1ora-0    3759.0    253 294
REMARK             <etc.>
REMARK
REMARK Of the top ten scoring matches, 6/10 were alpha/beta barrel
REMARK structures and 3/10 were P-loop or Rossmann-like doubly
REMARK wound alpha/beta folds.  The four submitted matches
REMARK comprise represenatives from each of these fold types: 
REMARK three alpha/beta barrels, one doubly wound alpha/beta.
REMARK
REMARK (5) For each matched fold, two alignments were submitted, the 
REMARK optimal and the first sub-optimal using the algorithm of Saqi &
REMARK Sternberg (J.Mol.Biol. 219, 727-732, 1991). The probabilities   
REMARK for the alignments were chosen subjectively.
REMARK 
REMARK ======================================================================
REMARK
REMARK Sequence considered one domain
REMARK ========================================================
SEQRES T0014 MKTVTVKNLIIGEGMPKIIVSLMGRDINSVKAEALAYREATFDILEWRVD
SEQRES T0014 HFMDIASTQSVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTL
SEQRES T0014 NRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHNVYVVMSNHDFHQTPS
SEQRES T0014 AEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPV
SEQRES T0014 ITMSMAKEGVISRLAGEVFGSAATFGAVKQASAPGQIAVNDLRSVLMILH
SEQRES T0014 NA
REMARK ========================================================
REMARK
REMARK
TSCORE T0014 0 0.40 1UBS A 0
TSCORE T0014 0 0.20 1TML - 0
TSCORE T0014 0 0.20 1XYZ A 0
TSCORE T0014 0 0.20 1NIP B 0
TSCORE T0014 0 0.00 1DRI - 0
TSCORE T0014 0 0.00 1ADS - 0
TSCORE T0014 0 0.00 1NAL 1 0
TSCORE T0014 0 0.00 1ORA - 0
TSCORE T0014 0 0.00 1TLF A 0
TSCORE T0014 0 0.00 1TPF A 0
TSCORE T0014 0 0.00 1FNB - 0
TSCORE T0014 0 0.00 1CHR A 0
TSCORE T0014 0 0.00 3ECA A 0
TSCORE T0014 0 0.00 1PHP - 0
TSCORE T0014 0 0.00 1PFK A 0
TSCORE T0014 0 0.00 1FBA A 0
TSCORE T0014 0 0.00 2LIV - 0
TSCORE T0014 0 0.00 1ADD - 0
TSCORE T0014 0 0.00 4TS1 A 0
TSCORE T0014 0 0.00 1MLA - 0
TSCORE T0014 0 0.00 1CSE E 0
TSCORE T0014 0 0.00 1SCU A 0
TSCORE T0014 0 0.00 1PDA - 0
TSCORE T0014 0 0.00 1DBS - 0
TSCORE T0014 0 0.00 1CNV - 0
TSCORE T0014 0 0.00 1UBS B 0
TSCORE T0014 0 0.00 1SCU B 0
TSCORE T0014 0 0.00 2DLN - 0
TSCORE T0014 0 0.00 1CAJ - 0
TSCORE T0014 0 0.00 1FRP A 0
TSCORE T0014 0 0.00 1THT A 0
TSCORE T0014 0 0.00 1CEO - 0
TSCORE T0014 0 0.00 1OYB - 0
TSCORE T0014 0 0.00 1HDC A 0
TSCORE T0014 0 0.00 1GHR - 0
TSCORE T0014 0 0.00 2HAD - 0
TSCORE T0014 0 0.00 1HMY - 0
TSCORE T0014 0 0.00 8ABP - 0
TSCORE T0014 0 0.00 1EMD - 0
TSCORE T0014 0 0.00 1DEA A 0
TSCORE T0014 0 0.00 7AAT A 0
TSCORE T0014 0 0.00 1HDR - 0
TSCORE T0014 0 0.00 1NAR - 0
TSCORE T0014 0 0.00 1AXN - 0
TSCORE T0014 0 0.00 1GIA - 0
TSCORE T0014 0 0.00 1SBP - 0
TSCORE T0014 0 0.00 1CND - 0
TSCORE T0014 0 0.00 1ENY - 0
TSCORE T0014 0 0.00 4ICD - 0
TSCORE T0014 0 0.00 1IRK - 0
TSCORE T0014 0 0.00 2PIA - 0
TSCORE T0014 0 0.00 1PEA - 0
TSCORE T0014 0 0.00 1QOR A 0
TSCORE T0014 0 0.00 2NAC A 0
TSCORE T0014 0 0.00 1PTA - 0
TSCORE T0014 0 0.00 1XIC - 0
TSCORE T0014 0 0.00 1DAA A 0
TSCORE T0014 0 0.00 1HPM - 0
TSCORE T0014 0 0.00 1HLE A 0
TSCORE T0014 0 0.00 2HNP - 0
TSCORE T0014 0 0.00 3PGM - 0
TSCORE T0014 0 0.00 9LDT A 0
TSCORE T0014 0 0.00 1GLT - 0
TSCORE T0014 0 0.00 2MNR - 0
TSCORE T0014 0 0.00 1CSN - 0
TSCORE T0014 0 0.00 1CTC - 0
TSCORE T0014 0 0.00 4BLM A 0
TSCORE T0014 0 0.00 1CSM A 0
TSCORE T0014 0 0.00 1APM E 0
TSCORE T0014 0 0.00 1GD1 O 0
TSCORE T0014 0 0.00 1PYP - 0
TSCORE T0014 0 0.00 2OHX A 0
TSCORE T0014 0 0.00 1UDG - 0
TSCORE T0014 0 0.00 1EDT - 0
TSCORE T0014 0 0.00 1AHC - 0
TSCORE T0014 0 0.00 2DKB - 0
TSCORE T0014 0 0.00 1BDM A 0
TSCORE T0014 0 0.00 1AK3 A 0
TSCORE T0014 0 0.00 4ENL - 0
TSCORE T0014 0 0.00 1TPL A 0
TSCORE T0014 0 0.00 6LDH - 0
TSCORE T0014 0 0.00 2DNJ A 0
TSCORE T0014 0 0.00 1TYS - 0
TSCORE T0014 0 0.00 1NFP - 0
TSCORE T0014 0 0.00 1MRR A 0
TSCORE T0014 0 0.00 2REB - 0
TSCORE T0014 0 0.00 1PII - 0
TSCORE T0014 0 0.00 1OPR - 0
TSCORE T0014 0 0.00 1XRA - 0
TSCORE T0014 0 0.00 1ALK A 0
TSCORE T0014 0 0.00 1BNC A 0
TSCORE T0014 0 0.00 1RVE A 0
TSCORE T0014 0 0.00 1DIH - 0
TSCORE T0014 0 0.00 1EAF - 0
TSCORE T0014 0 0.00 1MAT - 0
TSCORE T0014 0 0.00 1HSB A 0
TSCORE T0014 0 0.00 1BTC - 0
TSCORE T0014 0 0.00 1HAN - 0
TSCORE T0014 0 0.00 1GLQ A 0
TSCORE T0014 0 0.00 2LAO - 0
TSCORE T0014 0 0.00 1OMP - 0
TSCORE T0014 0 0.00 1HSA A 0
TSCORE T0014 0 0.00 1CNS A 0
TSCORE T0014 0 0.00 1SE2 - 0
TSCORE T0014 0 0.00 3MDS A 0
TSCORE T0014 0 0.00 1CBG - 0
TSCORE T0014 0 0.00 1DOB - 0
TSCORE T0014 0 0.00 1CHD - 0
TSCORE T0014 0 0.00 1BVP 1 0
TSCORE T0014 0 0.00 1PKY A 0
TSCORE T0014 0 0.00 1ESC - 0
TSCORE T0014 0 0.00 1GAR B 0
TSCORE T0014 0 0.00 1AMG - 0
TSCORE T0014 0 0.00 1PLQ - 0
TSCORE T0014 0 0.00 1MIN A 0
TSCORE T0014 0 0.00 1PVC 1 0
TSCORE T0014 0 0.00 1MML - 0
TSCORE T0014 0 0.00 1PVC 3 0
TSCORE T0014 0 0.00 1AMP - 0
TSCORE T0014 0 0.00 1CTT - 0
TSCORE T0014 0 0.00 1SGT - 0
TSCORE T0014 0 0.00 1ERI A 0
TSCORE T0014 0 0.00 1HMP A 0
TSCORE T0014 0 0.00 1HGE A 0
TSCORE T0014 0 0.00 1WHT A 0
TSCORE T0014 0 0.00 1YPT A 0
TSCORE T0014 0 0.00 1BPB - 0
TSCORE T0014 0 0.00 1PBN - 0
TSCORE T0014 0 0.00 1BIA - 0
TSCORE T0014 0 0.00 1LEC - 0
TSCORE T0014 0 0.00 1LGR - 0
TSCORE T0014 0 0.00 1PRC C 0
TSCORE T0014 0 0.00 1EZM - 0
TSCORE T0014 0 0.00 3GRS - 0
TSCORE T0014 0 0.00 1CHM A 0
TSCORE T0014 0 0.00 1EFT - 0
TSCORE T0014 0 0.00 1TAH B 0
TSCORE T0014 0 0.00 1FPS - 0
TSCORE T0014 0 0.00 2SIL - 0
TSCORE T0014 0 0.00 1PYD A 0
TSCORE T0014 0 0.00 1GPH 1 0
TSCORE T0014 0 0.00 2CYP - 0
TSCORE T0014 0 0.00 1DPG A 0
TSCORE T0014 0 0.00 1GLK - 0
TSCORE T0014 0 0.00 2MEV 1 0
TSCORE T0014 0 0.00 1REC - 0
TSCORE T0014 0 0.00 2BBK H 0
TSCORE T0014 0 0.00 3CLA - 0
TSCORE T0014 0 0.00 1DSB A 0
TSCORE T0014 0 0.00 5P21 - 0
TSCORE T0014 0 0.00 1PHB - 0
TSCORE T0014 0 0.00 1NIF - 0
TSCORE T0014 0 0.00 2CTS - 0
TSCORE T0014 0 0.00 2TCT - 0
TSCORE T0014 0 0.00 1GLN - 0
TSCORE T0014 0 0.00 2POL A 0
TSCORE T0014 0 0.00 1LAM - 0
TSCORE T0014 0 0.00 1GPM A 0
TSCORE T0014 0 0.00 5RUB B 0
TSCORE T0014 0 0.00 1ABK - 0
TSCORE T0014 0 0.00 1AYH - 0
TSCORE T0014 0 0.00 1COL A 0
TSCORE T0014 0 0.00 1PRC M 0
TSCORE T0014 0 0.00 1GCB - 0
TSCORE T0014 0 0.00 2BLT A 0
TSCORE T0014 0 0.00 2HFT - 0
TSCORE T0014 0 0.00 2AAI B 0
TSCORE T0014 0 0.00 1NHP - 0
TSCORE T0014 0 0.00 1ARP - 0
TSCORE T0014 0 0.00 1SCS - 0
TSCORE T0014 0 0.00 8DFR - 0
TSCORE T0014 0 0.00 1HUR A 0
TSCORE T0014 0 0.00 3GAP A 0
TSCORE T0014 0 0.00 1ADM A 0
TSCORE T0014 0 0.00 1ADE A 0
TSCORE T0014 0 0.00 1DPP A 0
TSCORE T0014 0 0.00 1PPK E 0
TSCORE T0014 0 0.00 3MDD A 0
TSCORE T0014 0 0.00 1OFV - 0
TSCORE T0014 0 0.00 1LYL A 0
TSCORE T0014 0 0.00 1MFA - 0
TSCORE T0014 0 0.00 1PPN - 0
TSCORE T0014 0 0.00 1LYL B 0
TSCORE T0014 0 0.00 2PCD M 0
TSCORE T0014 0 0.00 3TGL - 0
TSCORE T0014 0 0.00 1MHL C 0
TSCORE T0014 0 0.00 1APT - 0
TSCORE T0014 0 0.00 1VSG A 0
TSCORE T0014 0 0.00 1CFB - 0
TSCORE T0014 0 0.00 1CUS - 0
TSCORE T0014 0 0.00 1CPC L 0
TSCORE T0014 0 0.00 1ARB - 0
TSCORE T0014 0 0.00 1MMO B 0
TSCORE T0014 0 0.00 1MYP C 0
TSCORE T0014 0 0.00 1OEL A 0
TSCORE T0014 0 0.00 1INP - 0
TSCORE T0014 0 0.00 1GLA G 0
TSCORE T0014 0 0.00 1GP1 A 0
TSCORE T0014 0 0.00 1BNH - 0
TSCORE T0014 0 0.00 1PGS - 0
TSCORE T0014 0 0.00 1NBA A 0
TSCORE T0014 0 0.00 1LXA - 0
TSCORE T0014 0 0.00 1GFF 1 0
TSCORE T0014 0 0.00 1PYA B 0
TSCORE T0014 0 0.00 1TBP A 0
TSCORE T0014 0 0.00 1BMT A 0
TSCORE T0014 0 0.00 1CTM - 0
TSCORE T0014 0 0.00 2PRD - 0
TSCORE T0014 0 0.00 1LFA A 0
TSCORE T0014 0 0.00 1CAU B 0
TSCORE T0014 0 0.00 2CPL - 0
TSCORE T0014 0 0.00 1CYN A 0
TSCORE T0014 0 0.00 1PVC 2 0
TSCORE T0014 0 0.00 3GLY - 0
TSCORE T0014 0 0.00 1TCA - 0
TSCORE T0014 0 0.00 1OLB A 0
TSCORE T0014 0 0.00 1HKG - 0
TSCORE T0014 0 0.00 1BCO - 0
TSCORE T0014 0 0.00 2HPD A 0
TSCORE T0014 0 0.00 1PRC H 0
TSCORE T0014 0 0.00 2SCP A 0
TSCORE T0014 0 0.00 1PRT B 0
TSCORE T0014 0 0.00 1BBT 2 0
TSCORE T0014 0 0.00 1HUW - 0
TSCORE T0014 0 0.00 1NSC A 0
TSCORE T0014 0 0.00 1THG - 0
TSCORE T0014 0 0.00 1ICE A 0
TSCORE T0014 0 0.00 1HNY - 0
TSCORE T0014 0 0.00 1BBP A 0
TSCORE T0014 0 0.00 1PRT A 0
TSCORE T0014 0 0.00 3HHR B 0
TSCORE T0014 0 0.00 1PNK A 0
TSCORE T0014 0 0.00 1CTN - 0
TSCORE T0014 0 0.00 1FCS - 0
TSCORE T0014 0 0.00 3COX - 0
TSCORE T0014 0 0.00 2PCD A 0
TSCORE T0014 0 0.00 1ECL - 0
TSCORE T0014 0 0.00 1CEL A 0
TSCORE T0014 0 0.00 3PMG A 0
TSCORE T0014 0 0.00 1HLB - 0
TSCORE T0014 0 0.00 1ASH - 0
TSCORE T0014 0 0.00 2RN2 - 0
TSCORE T0014 0 0.00 1AKL - 0
TSCORE T0014 0 0.00 1FCD A 0
TSCORE T0014 0 0.00 1L92 - 0
TSCORE T0014 0 0.00 1CID - 0
TSCORE T0014 0 0.00 1BCX - 0
TSCORE T0014 0 0.00 1KNB - 0
TSCORE T0014 0 0.00 1ASU - 0
TSCORE T0014 0 0.00 1IAA - 0
TSCORE T0014 0 0.00 1BAM - 0
TSCORE T0014 0 0.00 1DMA A 0
TSCORE T0014 0 0.00 1GPC - 0
TSCORE T0014 0 0.00 2BBV A 0
TSCORE T0014 0 0.00 1IAG - 0
TSCORE T0014 0 0.00 1SAC A 0
TSCORE T0014 0 0.00 1MMO G 0
TSCORE T0014 0 0.00 1POX A 0
TSCORE T0014 0 0.00 1DIS - 0
TSCORE T0014 0 0.00 3PTE - 0
TSCORE T0014 0 0.00 1CPC A 0
TSCORE T0014 0 0.00 1BMV 1 0
TSCORE T0014 0 0.00 8CAT A 0
TSCORE T0014 0 0.00 1TSR A 0
TSCORE T0014 0 0.00 1THV - 0
TSCORE T0014 0 0.00 4MBA - 0
TSCORE T0014 0 0.00 4FXN - 0
TSCORE T0014 0 0.00 1FCD C 0
TSCORE T0014 0 0.00 4SBV A 0
TSCORE T0014 0 0.00 1PRR - 0
TSCORE T0014 0 0.00 1OMF - 0
TSCORE T0014 0 0.00 1AAK - 0
TSCORE T0014 0 0.00 1VCA A 0
TSCORE T0014 0 0.00 1TIE - 0
TSCORE T0014 0 0.00 1VHH - 0
TSCORE T0014 0 0.00 2KAU C 0
TSCORE T0014 0 0.00 1RCI - 0
TSCORE T0014 0 0.00 4GCR - 0
TSCORE T0014 0 0.00 1PTH - 0
TSCORE T0014 0 0.00 2APD - 0
TSCORE T0014 0 0.00 1PNK B 0
TSCORE T0014 0 0.00 1GDI - 0
TSCORE T0014 0 0.00 1DDT - 0
TSCORE T0014 0 0.00 1HBG - 0
TSCORE T0014 0 0.00 1ILK - 0
TSCORE T0014 0 0.00 4FX2 - 0
TSCORE T0014 0 0.00 1LKI - 0
TSCORE T0014 0 0.00 1ESL - 0
TSCORE T0014 0 0.00 3CD4 - 0
TSCORE T0014 0 0.00 1TSS A 0
TSCORE T0014 0 0.00 1ITG - 0
TSCORE T0014 0 0.00 1GFF 2 0
TSCORE T0014 0 0.00 3BCL - 0
TSCORE T0014 0 0.00 1AFA 1 0
TSCORE T0014 0 0.00 2STV - 0
TSCORE T0014 0 0.00 1FLP - 0
TSCORE T0014 0 0.00 1LTS A 0
TSCORE T0014 0 0.00 1BAB A 0
TSCORE T0014 0 0.00 1CYX - 0
TSCORE T0014 0 0.00 1OVI - 0
TSCORE T0014 0 0.00 3SDH A 0
TSCORE T0014 0 0.00 1GRJ - 0
TSCORE T0014 0 0.00 1BBT 1 0
TSCORE T0014 0 0.00 1COB A 0
TSCORE T0014 0 0.00 1I1B - 0
TSCORE T0014 0 0.00 2SAS - 0
TSCORE T0014 0 0.00 3CHY - 0
TSCORE T0014 0 0.00 1PHR - 0
TSCORE T0014 0 0.00 1SCC - 0
TSCORE T0014 0 0.00 1HJR A 0
TSCORE T0014 0 0.00 1ILL G 0
TSCORE T0014 0 0.00 1PRN - 0
TSCORE T0014 0 0.00 153L - 0
TSCORE T0014 0 0.00 1GPR - 0
TSCORE T0014 0 0.00 1BGC - 0
TSCORE T0014 0 0.00 1RBP - 0
TSCORE T0014 0 0.00 1SRA - 0
TSCORE T0014 0 0.00 1MUP - 0
TSCORE T0014 0 0.00 1TNF A 0
TSCORE T0014 0 0.00 1AEP - 0
TSCORE T0014 0 0.00 2LIG A 0
TSCORE T0014 0 0.00 1ASO A 0
TSCORE T0014 0 0.00 1LBA - 0
TSCORE T0014 0 0.00 1ECO - 0
TSCORE T0014 0 0.00 3RUB S 0
TSCORE T0014 0 0.00 1MMO D 0
TSCORE T0014 0 0.00 1LLA - 0
TSCORE T0014 0 0.00 1AOR A 0
TSCORE T0014 0 0.00 2TMV P 0
TSCORE T0014 0 0.00 2SNV - 0
TSCORE T0014 0 0.00 1ALS - 0
TSCORE T0014 0 0.00 1VMO A 0
TSCORE T0014 0 0.00 1DTR - 0
TSCORE T0014 0 0.00 1WHT B 0
TSCORE T0014 0 0.00 1GAL - 0
TSCORE T0014 0 0.00 1GMF A 0
TSCORE T0014 0 0.00 1ILR 1 0
TSCORE T0014 0 0.00 1TRK A 0
TSCORE T0014 0 0.00 1ILL R 0
TSCORE T0014 0 0.00 1LE4 - 0
TSCORE T0014 0 0.00 1RCB - 0
TSCORE T0014 0 0.00 1SNC - 0
TSCORE T0014 0 0.00 2CCY A 0
TSCORE T0014 0 0.00 1PKP - 0
TSCORE T0014 0 0.00 1CDA A 0
TSCORE T0014 0 0.00 1GTQ A 0
TSCORE T0014 0 0.00 1PNE - 0
TSCORE T0014 0 0.00 5PAL - 0
TSCORE T0014 0 0.00 1PVU A 0
TSCORE T0014 0 0.00 1RND - 0
TSCORE T0014 0 0.00 9WGA A 0
TSCORE T0014 0 0.00 1BSR A 0
TSCORE T0014 0 0.00 2IHL - 0
TSCORE T0014 0 0.00 1BBH A 0
TSCORE T0014 0 0.00 1TTB A 0
TSCORE T0014 0 0.00 1ITH A 0
TSCORE T0014 0 0.00 1VIL - 0
TSCORE T0014 0 0.00 2MTA C 0
TSCORE T0014 0 0.00 1NCF A 0
TSCORE T0014 0 0.00 3DPV A 0
TSCORE T0014 0 0.00 1RFB A 0
TSCORE T0014 0 0.00 2MHR - 0
TSCORE T0014 0 0.00 1RSY - 0
TSCORE T0014 0 0.00 1ILM B 0
TSCORE T0014 0 0.00 2AZA A 0
TSCORE T0014 0 0.00 1BAC - 0
TSCORE T0014 0 0.00 1LCF - 0
TSCORE T0014 0 0.00 1PAZ - 0
TSCORE T0014 0 0.00 2END - 0
TSCORE T0014 0 0.00 1LIS - 0
TSCORE T0014 0 0.00 2PF2 - 0
TSCORE T0014 0 0.00 1SLT B 0
TSCORE T0014 0 0.00 2MSB A 0
TSCORE T0014 0 0.00 1CGO - 0
TSCORE T0014 0 0.00 1AGI - 0
TSCORE T0014 0 0.00 4CPV - 0
TSCORE T0014 0 0.00 1CDG - 0
TSCORE T0014 0 0.00 1CXC - 0
TSCORE T0014 0 0.00 1ACF - 0
TSCORE T0014 0 0.00 1YCC - 0
TSCORE T0014 0 0.00 1CD8 - 0
TSCORE T0014 0 0.00 1HTM D 0
TSCORE T0014 0 0.00 1POA - 0
TSCORE T0014 0 0.00 1PDN C 0
TSCORE T0014 0 0.00 8ATC B 0
TSCORE T0014 0 0.00 1BFG - 0
TSCORE T0014 0 0.00 1MSC - 0
TSCORE T0014 0 0.00 3AAH A 0
TSCORE T0014 0 0.00 1FKB - 0
TSCORE T0014 0 0.00 1LKK A 0
TSCORE T0014 0 0.00 1CWP A 0
TSCORE T0014 0 0.00 1DUP A 0
TSCORE T0014 0 0.00 1HUL A 0
TSCORE T0014 0 0.00 1REG X 0
TSCORE T0014 0 0.00 1AYA A 0
TSCORE T0014 0 0.00 2PNA - 0
TSCORE T0014 0 0.00 2PLD A 0
TSCORE T0014 0 0.00 1CMB A 0
TSCORE T0014 0 0.00 2TRX A 0
TSCORE T0014 0 0.00 1POC - 0
TSCORE T0014 0 0.00 1MSA A 0
TSCORE T0014 0 0.00 2BBK L 0
TSCORE T0014 0 0.00 1EXG - 0
TSCORE T0014 0 0.00 3TRX - 0
TSCORE T0014 0 0.00 1ORD A 0
TSCORE T0014 0 0.00 1TLK - 0
TSCORE T0014 0 0.00 2MCM - 0
TSCORE T0014 0 0.00 1DLC - 0
TSCORE T0014 0 0.00 8ACN - 0
TSCORE T0014 0 0.00 1PIL - 0
TSCORE T0014 0 0.00 9RNT - 0
TSCORE T0014 0 0.00 2CHS A 0
TSCORE T0014 0 0.00 2KAU A 0
TSCORE T0014 0 0.00 1OTG A 0
TSCORE T0014 0 0.00 1FIV A 0
TSCORE T0014 0 0.00 1TSP - 0
TSCORE T0014 0 0.00 3SIC I 0
TSCORE T0014 0 0.00 1STF I 0
TSCORE T0014 0 0.00 2RSP A 0
TSCORE T0014 0 0.00 1FRD - 0
TSCORE T0014 0 0.00 1PTS A 0
TSCORE T0014 0 0.00 1ONC - 0
TSCORE T0014 0 0.00 1GOF - 0
TSCORE T0014 0 0.00 1LTS D 0
TSCORE T0014 0 0.00 1HCN B 0
TSCORE T0014 0 0.00 1KJC - 0
TSCORE T0014 0 0.00 2WRP R 0
TSCORE T0014 0 0.00 1HSB B 0
TSCORE T0014 0 0.00 2CDV - 0
TSCORE T0014 0 0.00 1APK - 0
TSCORE T0014 0 0.00 3ITR - 0
TSCORE T0014 0 0.00 1TNM - 0
TSCORE T0014 0 0.00 1RIS - 0
TSCORE T0014 0 0.00 1LLI A 0
TSCORE T0014 0 0.00 1DIF A 0
TSCORE T0014 0 0.00 1FNA - 0
TSCORE T0014 0 0.00 1DYN A 0
TSCORE T0014 0 0.00 1PND - 0
TSCORE T0014 0 0.00 1BPK - 0
TSCORE T0014 0 0.00 2PHY - 0
TSCORE T0014 0 0.00 1DCH A 0
TSCORE T0014 0 0.00 1HIV A 0
TSCORE T0014 0 0.00 256B A 0
TSCORE T0014 0 0.00 1FDD - 0
TSCORE T0014 0 0.00 1PRT D 0
TSCORE T0014 0 0.00 1BRN L 0
TSCORE T0014 0 0.00 2SPC A 0
TSCORE T0014 0 0.00 2KAU B 0
TSCORE T0014 0 0.00 1STD - 0
TSCORE T0014 0 0.00 1PSP A 0
TSCORE T0014 0 0.00 1TEN - 0
TSCORE T0014 0 0.00 1ZAA C 0
TSCORE T0014 0 0.00 1NCG - 0
TSCORE T0014 0 0.00 1ABA - 0
TSCORE T0014 0 0.00 1TIG - 0
TSCORE T0014 0 0.00 1CEW I 0
TSCORE T0014 0 0.00 1PUC - 0
TSCORE T0014 0 0.00 1KPT A 0
TSCORE T0014 0 0.00 1HCD - 0
TSCORE T0014 0 0.00 1ECM A 0
TSCORE T0014 0 0.00 1FIA B 0
TSCORE T0014 0 0.00 1CYI - 0
TSCORE T0014 0 0.00 1PYI A 0
TSCORE T0014 0 0.00 1MHL A 0
TSCORE T0014 0 0.00 1TPG - 0
TSCORE T0014 0 0.00 1ICE B 0
TSCORE T0014 0 0.00 1POH - 0
TSCORE T0014 0 0.00 1UDI I 0
TSCORE T0014 0 0.00 1GMP A 0
TSCORE T0014 0 0.00 1BET - 0
TSCORE T0014 0 0.00 1TFG - 0
TSCORE T0014 0 0.00 1BTN - 0
TSCORE T0014 0 0.00 1FLX - 0
TSCORE T0014 0 0.00 1FBR - 0
TSCORE T0014 0 0.00 451C - 0
TSCORE T0014 0 0.00 1PRT F 0
TSCORE T0014 0 0.00 2BOP A 0
TSCORE T0014 0 0.00 1SMP I 0
TSCORE T0014 0 0.00 1PBA - 0
TSCORE T0014 0 0.00 2FXB - 0
TSCORE T0014 0 0.00 3B5C - 0
TSCORE T0014 0 0.00 1HYP - 0
TSCORE T0014 0 0.00 1HST A 0
TSCORE T0014 0 0.00 1OAC A 0
TSCORE T0014 0 0.00 1UTG - 0
TSCORE T0014 0 0.00 1LEA - 0
TSCORE T0014 0 0.00 1HRY A 0
TSCORE T0014 0 0.00 1CC5 - 0
TSCORE T0014 0 0.00 1PDG A 0
TSCORE T0014 0 0.00 1COO - 0
TSCORE T0014 0 0.00 1NEQ - 0
TSCORE T0014 0 0.00 1CDC B 0
TSCORE T0014 0 0.00 1PK4 - 0
TSCORE T0014 0 0.00 1UBI - 0
TSCORE T0014 0 0.00 1GPB - 0
TSCORE T0014 0 0.00 1MOL A 0
TSCORE T0014 0 0.00 1HIP - 0
TSCORE T0014 0 0.00 1VCC - 0
TSCORE T0014 0 0.00 1TNS - 0
TSCORE T0014 0 0.00 1TIF - 0
TSCORE T0014 0 0.00 1XXB A 0
TSCORE T0014 0 0.00 1HUM A 0
TSCORE T0014 0 0.00 1R69 - 0
TSCORE T0014 0 0.00 1LAB - 0
TSCORE T0014 0 0.00 1MDY A 0
TSCORE T0014 0 0.00 1CTF - 0
TSCORE T0014 0 0.00 1BGH - 0
TSCORE T0014 0 0.00 2SN3 - 0
TSCORE T0014 0 0.00 1APL C 0
TSCORE T0014 0 0.00 1PHT - 0
TSCORE T0014 0 0.00 1LFB - 0
TSCORE T0014 0 0.00 1HRE - 0
TSCORE T0014 0 0.00 3EBX - 0
TSCORE T0014 0 0.00 1MJC - 0
TSCORE T0014 0 0.00 1ENH - 0
TSCORE T0014 0 0.00 1WAP A 0
TSCORE T0014 0 0.00 2GF1 - 0
TSCORE T0014 0 0.00 1HPI - 0
TSCORE T0014 0 0.00 1HSQ - 0
TSCORE T0014 0 0.00 1MCA A 0
TSCORE T0014 0 0.00 1PYA A 0
TSCORE T0014 0 0.00 1HOE - 0
TSCORE T0014 0 0.00 1CHC - 0
TSCORE T0014 0 0.00 3IL8 - 0
TSCORE T0014 0 0.00 1SAP - 0
TSCORE T0014 0 0.00 1YPC I 0
TSCORE T0014 0 0.00 1HLH A 0
TSCORE T0014 0 0.00 1SPB P 0
TSCORE T0014 0 0.00 2DRP A 0
TSCORE T0014 0 0.00 1DIK - 0
TSCORE T0014 0 0.00 1SCM A 0
TSCORE T0014 0 0.00 3AAH B 0
TSCORE T0014 0 0.00 1CSE I 0
TSCORE T0014 0 0.00 1ATA - 0
TSCORE T0014 0 0.00 1FXR A 0
TSCORE T0014 0 0.00 1ERG - 0
TSCORE T0014 0 0.00 1HCN A 0
TSCORE T0014 0 0.00 1LPB A 0
TSCORE T0014 0 0.00 1PTX - 0
TSCORE T0014 0 0.00 1AAL A 0
TSCORE T0014 0 0.00 1TGX A 0
TSCORE T0014 0 0.00 1BOV A 0
TSCORE T0014 0 0.00 1LCC A 0
TSCORE T0014 0 0.00 2HIP A 0
TSCORE T0014 0 0.00 1OTF A 0
TSCORE T0014 0 0.00 1PVC 4 0
TSCORE T0014 0 0.00 1HCC - 0
TSCORE T0014 0 0.00 1SSR - 0
TSCORE T0014 0 0.00 1FOS F 0
TSCORE T0014 0 0.00 1FXD - 0
TSCORE T0014 0 0.00 1ISU A 0
TSCORE T0014 0 0.00 1YRN A 0
TSCORE T0014 0 0.00 1FOS E 0
TSCORE T0014 0 0.00 1SHG - 0
TSCORE T0014 0 0.00 1AAP A 0
TSCORE T0014 0 0.00 1MLP A 0
TSCORE T0014 0 0.00 1ABO A 0
TSCORE T0014 0 0.00 1GAT A 0
TSCORE T0014 0 0.00 1EGF - 0
TSCORE T0014 0 0.00 1HNR - 0
TSCORE T0014 0 0.00 1HPT - 0
TSCORE T0014 0 0.00 1HYM A 0
TSCORE T0014 0 0.00 1HCG B 0
TSCORE T0014 0 0.00 1TFI - 0
TSCORE T0014 0 0.00 4SGB I 0
TSCORE T0014 0 0.00 1CGJ I 0
TSCORE T0014 0 0.00 1HCR A 0
TSCORE T0014 0 0.00 1MYK A 0
TSCORE T0014 0 0.00 1RAE - 0
TSCORE T0014 0 0.00 8RXN A 0
TSCORE T0014 0 0.00 1FC2 C 0
TSCORE T0014 0 0.00 2MEV 4 0
TSCORE T0014 0 0.00 3SGB I 0
TSCORE T0014 0 0.00 1IXA - 0
TSCORE T0014 0 0.00 1BBL - 0
TSCORE T0014 0 0.00 1CLG A 0
TSCORE T0014 0 0.00 7API B 0
TSCORE T0014 0 0.00 1HTR P 0
TSCORE T0014 0 0.00 1PPT - 0
TSCORE T0014 0 0.00 1PDC - 0
TSCORE T0014 0 0.00 1EHS - 0
TSCORE T0014 0 0.00 2CRD - 0
TSCORE T0014 0 0.00 1BBA - 0
TSCORE T0014 0 0.00 2CLG A 0
TSCORE T0014 0 0.00 2BPA 3 0
TSCORE T0014 0 0.00 1PTQ - 0
TSCORE T0014 0 0.00 2ACH B 0
TSCORE T0014 0 0.00 1IFI - 0
TSCORE T0014 0 0.00 1CBN - 0
TSCORE T0014 0 0.00 1HLE B 0
TSCORE T0014 0 0.00 1BTD A 0
TSCORE T0014 0 0.00 1BHP - 0
TSCORE T0014 0 0.00 1INA - 0
TSCORE T0014 0 0.00 1BI6 H 0
TSCORE T0014 0 0.00 1TAB I 0
TSCORE T0014 0 0.00 1PAI B 0
TSCORE T0014 0 0.00 1BBT 4 0
TSCORE T0014 0 0.00 1ERL - 0
TSCORE T0014 0 0.00 1CAG B 0
TSCORE T0014 0 0.00 1APH B 0
TSCORE T0014 0 0.00 1DME - 0
TSCORE T0014 0 0.00 1LTS C 0
TSCORE T0014 0 0.00 1WFB A 0
TSCORE T0014 0 0.00 1DMC - 0
TSCORE T0014 0 0.00 1DFN A 0
TSCORE T0014 0 0.00 1COS A 0
TSCORE T0014 0 0.00 1MEA - 0
TSCORE T0014 0 0.00 1AHT L 0
TSCORE T0014 0 0.00 2MLT A 0
TSCORE T0014 0 0.00 1LYP - 0
TSCORE T0014 0 0.00 2ZTA A 0
TSCORE T0014 0 0.00 1GCN - 0
TSCORE T0014 0 0.00 1CCO - 0
TSCORE T0014 0 0.00 1PPE I 0
TSCORE T0014 0 0.00 1BOM B 0
TSCORE T0014 0 0.00 1DHX - 0
TSCORE T0014 0 0.00 1MMH 5 0
TSCORE T0014 0 0.00 6RLX B 0
TSCORE T0014 0 0.00 1APH A 0
TSCORE T0014 0 0.00 1MMH 3 0
TSCORE T0014 0 0.00 1MMH 6 0
TSCORE T0014 0 0.00 6RLX A 0
TSCORE T0014 0 0.00 2IFO - 0
TSCORE T0014 0 0.00 1RLX B 0
TSCORE T0014 0 0.00 1MMH 7 0
TSCORE T0014 0 0.00 1RLX A 0
TSCORE T0014 0 0.00 1BTS - 0
TSCORE T0014 0 0.00 1IFM - 0
TSCORE T0014 0 0.00 1BTQ - 0
TSCORE T0014 0 0.00 1CDL G 0
TSCORE T0014 0 0.00 1APM I 0
TSCORE T0014 0 0.00 1BOM A 0
TSCORE T0014 0 0.00 1RPB - 0
TSCORE T0014 0 0.00 2PTE E 0
TSCORE T0014 0 0.00 1SOL - 0
TSCORE T0014 0 0.00 1EDN - 0
TSCORE T0014 0 0.00 1MMH 2 0
TSCORE T0014 0 0.00 1MMH 4 0
TSCORE T0014 0 0.00 1MMH 1 0
TSCORE T0014 0 0.00 1AMB - 0
REMARK 
REMARK =============================================================
REMARK Alignment read in,    2 sequences, length is 279
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  279  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  279 Check: 100  Weight: 1.00
REMARK Name: 1UBSA Len:  279 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  M.KTVTVKNL IIGEGMP.KI IVSLMG.RDI NSVKAEALAY REATFDILEW 
REMARK 1UBSA  MERYENLFAQ LNDRREGAFV PFVTLGDPGI EQSLKIIDTL IDAGADALEL 
REMARK 
REMARK        51                                                 100
REMARK T0014  RVDH...FMD .......... ...IAST.QS VLTAARVIRD AMPDIPLLFT 
REMARK 1UBSA  GVPFSDPLAD GPTIQNANLR AFAAGVTPAQ CFEMLALIRE KHPTIPIGLL 
REMARK 
REMARK        101                                                150
REMARK T0014  FRSAKEGGEQ TITTQHYLTL NRAAIDSGLV DMIDLELFTG DADVKATVDY 
REMARK 1UBSA  MY......AN LVFNNGIDAF YARCEQVGVD SVLVAD.VPV EES.APFRQA 
REMARK 
REMARK        151                                                200
REMARK T0014  AHAHNVYVVM SNHDFHQTPS AEEMVSRLRK MQALGADIPK IAVMPQSKHD 
REMARK 1UBSA  ALRHNIAPIF ICPP....NA DDDLLRQVAS YG....RGY. .TYLLSRSP. 
REMARK 
REMARK        201                                                250
REMARK T0014  VLTLLTATLE MQQHYADRPV ITMSMAKEGV ISRLAGEVFG ......SAAT 
REMARK 1UBSA  LHHLIEKLKE YHAA...PAL QGFGISSPEQ VSAAVRAGAA GAISGSAIVK 
REMARK 
REMARK        251                           279
REMARK T0014  FGAVKQAS.A PGQIAVNDLR SVLMILHNA
REMARK 1UBSA  IIEKNLASPK QMLAELRSFV SAMKAASRA
REMARK 
TALIGN T0014 0    1    1 1UBS A 0       1       1     0.60   1 
TALIGN T0014 0    2   16 1UBS A 0       3      17     0.60   1 
TALIGN T0014 0   17   24 1UBS A 0      19      26     0.60   1 
TALIGN T0014 0   25   51 1UBS A 0      28      54     0.60   1 
TALIGN T0014 0   52   54 1UBS A 0      58      60     0.60   1 
TALIGN T0014 0   55   58 1UBS A 0      74      77     0.60   1 
TALIGN T0014 0   59   82 1UBS A 0      79     102     0.60   1 
TALIGN T0014 0   89  116 1UBS A 0     103     130     0.60   1 
TALIGN T0014 0  118  123 1UBS A 0     131     136     0.60   1 
TALIGN T0014 0  125  144 1UBS A 0     137     156     0.60   1 
TALIGN T0014 0  149  162 1UBS A 0     157     170     0.60   1 
TALIGN T0014 0  167  169 1UBS A 0     171     173     0.60   1 
TALIGN T0014 0  172  179 1UBS A 0     174     192     0.60   1 
TALIGN T0014 0  181  194 1UBS A 0     193     206     0.60   1 
TALIGN T0014 0  198  220 1UBS A 0     207     229     0.60   1 
TALIGN T0014 0  221  232 1UBS A 0     236     247     0.60   1 
TALIGN T0014 0  233  252 1UBS A 0     249     268     0.60   1 
REMARK Alignment read in,    2 sequences, length is 270
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  270  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  270 Check: 100  Weight: 1.00
REMARK Name: 1UBSA Len:  270 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTVTVKNLI IGEGMPK.II VSLMGRDINS VKAEALAYRE ATFDILEWRV 
REMARK 1UBSA  MERYENLFAQ LNDRREGAFV PFVTLGDPGI EQSLKIIDTL IDAGADALEL 
REMARK 
REMARK        51                                                 100
REMARK T0014  DH.FMDIAST Q.SVLTAARV IRDAMPD.IP LLFTFRSAKE GGEQTIT... 
REMARK 1UBSA  GVPFSDPLAD GPTIQNANLR AFAAGVTPAQ CFEMLALIRE KHPTIPIGLL 
REMARK 
REMARK        101                                                150
REMARK T0014  ..TQHYLT.. LNRAAIDSGL VDMIDLELFT GDADVKATVD YAHAHNVYVV 
REMARK 1UBSA  MYANLVFNNG IDAFYARCEQ VGVDSVLVAD VPVEESAPFR QAALRHNIAP 
REMARK 
REMARK        151                                                200
REMARK T0014  MSNHDFHQTP SAEEMVSRLR KMQALGADIP KIAVMPQSKH DVLTLLTATL 
REMARK 1UBSA  IFICP....P NADD..DLLR QVASYGRGY. .TYLLSRSP. LHHLIEKLKE 
REMARK 
REMARK        201                                                250
REMARK T0014  EMQQHYADRP VITMSMAKEG VISRLAGEV. ......FGSA ATFGAVKQAS 
REMARK 1UBSA  YHAAPALQGF GIS...SPEQ VSAAVRAGAA GAISGSAIVK IIEKNLASPK 
REMARK 
REMARK        251                  270
REMARK T0014  APGQIAVNDL RSVLMILHNA 
REMARK 1UBSA  QMLAELRSFV SAMKAASRA. 
REMARK 
TALIGN T0014 0    1   17 1UBS A 0       1      17     0.40   2 
TALIGN T0014 0   18   51 1UBS A 0      19      52     0.40   2 
TALIGN T0014 0   52   59 1UBS A 0      54      61     0.40   2 
TALIGN T0014 0   60   74 1UBS A 0      63      77     0.40   2 
TALIGN T0014 0   75   93 1UBS A 0      79      97     0.40   2 
TALIGN T0014 0   94   99 1UBS A 0     103     108     0.40   2 
TALIGN T0014 0  100  144 1UBS A 0     111     155     0.40   2 
TALIGN T0014 0  149  153 1UBS A 0     156     160     0.40   2 
TALIGN T0014 0  156  168 1UBS A 0     161     173     0.40   2 
TALIGN T0014 0  171  178 1UBS A 0     174     192     0.40   2 
TALIGN T0014 0  180  202 1UBS A 0     193     215     0.40   2 
TALIGN T0014 0  206  218 1UBS A 0     216     228     0.40   2 
TALIGN T0014 0  219  251 1UBS A 0     236     268     0.40   2 
REMARK =============================================================
REMARK 
REMARK 
REMARK Alignment read in,    2 sequences, length is 292
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  292  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  292 Check: 100  Weight: 1.00
REMARK Name: 1TML Len:  292 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTVTVKNLI IGEGMPKIIV SLMGRDINSV KAEALAYREA TFDILEWRVD 
REMARK  1TML  NDS...PFYV NPNMSSAEWV RNNPNDPRTP VIRDRI...A SVPQGTWFAH 
REMARK 
REMARK        51                                                 100
REMARK T0014  HFMDIASTQS VLTAARVIRD AMPDIPLLFT FRSAK..EGG EQTITT.QHY 
REMARK  1TML  HNPGQITGQV DALMSAAQAA GKIPILVVYN APGRDCGNHS SGGAPSHSAY 
REMARK 
REMARK        101                                                150
REMARK T0014  LTLNRAAIDS ..GL..VDMI DLE....... .L.FTGDADV KATVDYAHAH 
REMARK  1TML  RSWIDEFAAG LKNRPAYIIV EPDLISLMSS CMQHVQQEVL ETMAYAGKAL 
REMARK 
REMARK        151                                                200
REMARK T0014  NVYV....VM SNHDFHQTPS AEEMVSRLRK MQALGADIPK IAVMPQSKHD 
REMARK  1TML  KAGSSQARIY FDAGHSAWHS PAQMASWLQQ ADISNSAHGI ATNTSNYRWT 
REMARK 
REMARK        201                                                250
REMARK T0014  VLTLLTATLE MQQHYADRP. VITMSMAK.E GVISRLAGEV FGSAATFGAV 
REMARK  1TML  ADEVAYAKAV LSAIGNPSLR AVIDTSRNGN GPAGNEWCDP SGRAIGTPST 
REMARK 
REMARK        251                                        292
REMARK T0014  KQASAPGQIA VNDL...... .......... ..RSVLMILH NA
REMARK  1TML  TNTGDPMIDA FLWIKLPGEA DGCIAGAGQF VPQAAYEMAI AA
REMARK 
TALIGN T0014 0    1    3 1TML - 0       1       3     0.60   1 
TALIGN T0014 0    7   36 1TML - 0       4      33     0.60   1 
TALIGN T0014 0   40   85 1TML - 0      34      79     0.60   1 
TALIGN T0014 0   86   94 1TML - 0      82      90     0.60   1 
TALIGN T0014 0   95  107 1TML - 0      92     104     0.60   1 
TALIGN T0014 0  108  109 1TML - 0     107     108     0.60   1 
TALIGN T0014 0  110  116 1TML - 0     111     117     0.60   1 
TALIGN T0014 0  117  117 1TML - 0     126     126     0.60   1 
TALIGN T0014 0  118  138 1TML - 0     128     148     0.60   1 
TALIGN T0014 0  139  199 1TML - 0     153     213     0.60   1 
TALIGN T0014 0  200  207 1TML - 0     215     222     0.60   1 
TALIGN T0014 0  208  242 1TML - 0     224     258     0.60   1 
TALIGN T0014 0  243  252 1TML - 0     277     286     0.60   1 
REMARK Alignment read in,    2 sequences, length is 298
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  298  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  298 Check: 100  Weight: 1.00
REMARK Name: 1TML Len:  298 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTV...TVK N......... LIIGE..... ....GMP..K IIVSLM.GRD 
REMARK  1TML  NDSPFYVNPN MSSAEWVRNN PNDPRTPVIR DRIASVPQGT WFAHHNPGQI 
REMARK 
REMARK        51                                                 100
REMARK T0014  INSVKAEALA YREATF..DI LEWRVDHFM. .DI..A..ST .QSVLTAARV 
REMARK  1TML  TGQVDALMSA AQAAGKIPIL VVYNAPGRDC GNHSSGGAPS HSAYRSWIDE 
REMARK 
REMARK        101                                                150
REMARK T0014  IRDAMPDIPL LFTFRSA... ...KEGGEQT ITTQHYLTLN RAAIDSGLVD 
REMARK  1TML  FAAGLKNRPA YIIVEPDLIS LMSSCMQHVQ QEVLETMAYA GKALKAGSSQ 
REMARK 
REMARK        151                                                200
REMARK T0014  .MIDLEL.FT GDADVKATVD YAHAHNV... .YVVMSNHDF HQTPSAEEMV 
REMARK  1TML  ARIYFDAGHS AWHSPAQMAS WLQQADISNS AHGIATNTSN YRW.TADEVA 
REMARK 
REMARK        201                                                250
REMARK T0014  SRLRKMQALG ADIPKIAVMP QSKHDVLTLL TATLEMQQHY ADRPVITMSM 
REMARK  1TML  YAKAVLSAIG NPSLRAVIDT SRNGNGPAGN EWC.DPSGRA IGTP..STTN 
REMARK 
REMARK        251                                              298
REMARK T0014  AKEGVISRLA GEVFGSAATF GAVKQASAPG QIAVNDLRSV LMILHNA.
REMARK  1TML  TGDPMI.... .DAFLWIKLP GEADGCIAGA G...QFVPQA AYEMAIAA
REMARK 
TALIGN T0014 0    1    4 1TML - 0       1       4     0.40   2 
TALIGN T0014 0    5    8 1TML - 0       8      11     0.40   2 
TALIGN T0014 0    9   13 1TML - 0      21      25     0.40   2 
TALIGN T0014 0   14   16 1TML - 0      35      37     0.40   2 
TALIGN T0014 0   17   23 1TML - 0      40      46     0.40   2 
TALIGN T0014 0   24   42 1TML - 0      48      66     0.40   2 
TALIGN T0014 0   43   53 1TML - 0      69      79     0.40   2 
TALIGN T0014 0   54   55 1TML - 0      82      83     0.40   2 
TALIGN T0014 0   56   56 1TML - 0      86      86     0.40   2 
TALIGN T0014 0   57   58 1TML - 0      89      90     0.40   2 
TALIGN T0014 0   59   84 1TML - 0      92     117     0.40   2 
TALIGN T0014 0   85  111 1TML - 0     124     150     0.40   2 
TALIGN T0014 0  112  117 1TML - 0     152     157     0.40   2 
TALIGN T0014 0  118  136 1TML - 0     159     177     0.40   2 
TALIGN T0014 0  137  148 1TML - 0     182     193     0.40   2 
TALIGN T0014 0  150  188 1TML - 0     194     232     0.40   2 
TALIGN T0014 0  190  199 1TML - 0     233     242     0.40   2 
TALIGN T0014 0  202  211 1TML - 0     243     252     0.40   2 
TALIGN T0014 0  217  236 1TML - 0     253     272     0.40   2 
TALIGN T0014 0  240  252 1TML - 0     273     285     0.40   2 
REMARK =============================================================
REMARK 
REMARK 
REMARK Alignment read in,    2 sequences, length is 323
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  323  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  323 Check: 100  Weight: 1.00
REMARK Name: 1XYZA Len:  323 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTVTVKNLI IGEGMPKIIV SLMGRDINSV KAEALAYREA T.FDILEWRV 
REMARK 1XYZA  ..NA.LRDYA EARGIKIGTC VNYPFYNNSD PTYNSILQRE FSMVVCENEM 
REMARK 
REMARK        51                                                 100
REMARK T0014  D.....HFMD IASTQSVLTA ARVIRDAMPD IPLLFTFR.. ..SA....KE 
REMARK 1XYZA  KFDALQPRQN VFDFSKGDQL LAFAERNGMQ MRGHTLIWHN QNPSWLTNGN 
REMARK 
REMARK        101                                                150
REMARK T0014  GGEQTITTQH YLTLNRAAID S.GLVDMIDL ELFT....GD A......... 
REMARK 1XYZA  WNRDSLLAVM KNHITTVMTH YKGKIVEWDV ANECMDDSGN GLRSSIWRNV 
REMARK 
REMARK        151                                                200
REMARK T0014  ....DVKATV DYAHAHN..V YVVMSNHDFH QTP.SAEEMV SRLRKMQALG 
REMARK 1XYZA  IGQDYLDYAF RYAREADPDA LLFYNDYNIE DLGPKSNAVF NMIKSMKERG 
REMARK 
REMARK        201                                                250
REMARK T0014  ADIPKIAVM. ....PQSKHD VLTLLTATLE MQQH...YAD RPVITMSMA. 
REMARK 1XYZA  VPIDGVGFQC HFINGMSPEY LASIDQNIKR YAEIGVIVSF TEIDIRIPQS 
REMARK 
REMARK        251                                                300
REMARK T0014  ...KEGVISR LAGEVFGSAA TFGAVK.... .......QAS A.....PG.. 
REMARK 1XYZA  ENPATAFQVQ ANNYKELMKI CLANPNCNTF VMWGFTDKYT WIPGTFPGYG 
REMARK 
REMARK        301                     323
REMARK T0014  .QIAVN.DL. ...RSVLMIL HNA
REMARK 1XYZA  NPLIYDSNYN PKPAYNAIKE ALM
REMARK 
TALIGN T0014 0    3    4 1XYZ A 0     516     517     0.60   1 
TALIGN T0014 0    6   41 1XYZ A 0     518     553     0.60   1 
TALIGN T0014 0   42   50 1XYZ A 0     555     563     0.60   1 
TALIGN T0014 0   51   82 1XYZ A 0     569     600     0.60   1 
TALIGN T0014 0   83   84 1XYZ A 0     605     606     0.60   1 
TALIGN T0014 0   85  107 1XYZ A 0     611     633     0.60   1 
TALIGN T0014 0  108  119 1XYZ A 0     635     646     0.60   1 
TALIGN T0014 0  120  122 1XYZ A 0     651     653     0.60   1 
TALIGN T0014 0  123  135 1XYZ A 0     667     679     0.60   1 
TALIGN T0014 0  136  149 1XYZ A 0     682     695     0.60   1 
TALIGN T0014 0  150  174 1XYZ A 0     697     721     0.60   1 
TALIGN T0014 0  175  194 1XYZ A 0     727     746     0.60   1 
TALIGN T0014 0  195  206 1XYZ A 0     750     761     0.60   1 
TALIGN T0014 0  207  229 1XYZ A 0     766     788     0.60   1 
TALIGN T0014 0  230  233 1XYZ A 0     800     803     0.60   1 
TALIGN T0014 0  234  235 1XYZ A 0     809     810     0.60   1 
TALIGN T0014 0  236  240 1XYZ A 0     814     818     0.60   1 
TALIGN T0014 0  241  242 1XYZ A 0     820     821     0.60   1 
TALIGN T0014 0  243  252 1XYZ A 0     826     835     0.60   1 
REMARK Alignment read in,    2 sequences, length is 325
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  325  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  325 Check: 100  Weight: 1.00
REMARK Name: 1XYZA Len:  325 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTVTVKNLI IGEGMPKIIV SLMGRDINSV KAEALAYREA TFDILEWRVD 
REMARK 1XYZA  .NALRDYAEA RGIKIGTCVN YPFYNNSDP. TYNSILQREF S..MVVCENE 
REMARK 
REMARK        51                                                 100
REMARK T0014  H.F....MDI AS.TQSVLTA ARVIRDAMPD IPLLFTFRS. .AKEG....G 
REMARK 1XYZA  MKFDALQPRQ NVFDFSKGDQ LLAFAERNGM QMRGHTLIWH NQNPSWLTNG 
REMARK 
REMARK        101                                                150
REMARK T0014  EQT.ITTQHY LTLNRAAIDS GLV....DMI DLELF..... TG..DA.... 
REMARK 1XYZA  NWNRDSLLAV MKNHITTVMT HYKGKIVEWD VANECMDDSG NGLRSSIWRN 
REMARK 
REMARK        151                                                200
REMARK T0014  .....DVKAT VDYAHAHNVY VVMSNHDFHQ TPSAEEMVSR LRKMQALGAD 
REMARK 1XYZA  VIGQDYLDYA FRYAREADPD ALLFYNDYNI EDLGPKSNAV FNMIKSMKER 
REMARK 
REMARK        201                                                250
REMARK T0014  .IPKIA.... ..VMPQSKHD VLTLLTATLE MQQHY...AD RPVITMSMAK 
REMARK 1XYZA  GVPIDGVGFQ CHFINGMSPE YLASIDQNIK RYAEIGVIVS FTEIDIRIPQ 
REMARK 
REMARK        251                                                300
REMARK T0014  ...EGVISRL AGEVFGSAAT FGAVKQA... .......SAP GQ........ 
REMARK 1XYZA  SENPATAFQV QANNYKELMK ICLANPNCNT FVMWGFTDKY TWIPGTFPGY 
REMARK 
REMARK        301                       325
REMARK T0014  ..IAV....N D...LRSVLM ILHNA
REMARK 1XYZA  GNPLIYDSNY NPKPAYNAIK EALM.
REMARK 
TALIGN T0014 0    2   29 1XYZ A 0     516     543     0.40   2 
TALIGN T0014 0   31   41 1XYZ A 0     544     554     0.40   2 
TALIGN T0014 0   44   51 1XYZ A 0     555     562     0.40   2 
TALIGN T0014 0   52   52 1XYZ A 0     564     564     0.40   2 
TALIGN T0014 0   53   57 1XYZ A 0     569     573     0.40   2 
TALIGN T0014 0   58   83 1XYZ A 0     575     600     0.40   2 
TALIGN T0014 0   84   87 1XYZ A 0     603     606     0.40   2 
TALIGN T0014 0   88   91 1XYZ A 0     611     614     0.40   2 
TALIGN T0014 0   92  110 1XYZ A 0     616     634     0.40   2 
TALIGN T0014 0  111  118 1XYZ A 0     639     646     0.40   2 
TALIGN T0014 0  119  120 1XYZ A 0     652     653     0.40   2 
TALIGN T0014 0  121  122 1XYZ A 0     656     657     0.40   2 
TALIGN T0014 0  123  167 1XYZ A 0     667     711     0.40   2 
TALIGN T0014 0  168  172 1XYZ A 0     713     717     0.40   2 
TALIGN T0014 0  173  195 1XYZ A 0     724     746     0.40   2 
TALIGN T0014 0  196  207 1XYZ A 0     750     761     0.40   2 
TALIGN T0014 0  208  231 1XYZ A 0     765     788     0.40   2 
TALIGN T0014 0  232  236 1XYZ A 0     799     803     0.40   2 
TALIGN T0014 0  237  239 1XYZ A 0     814     816     0.40   2 
TALIGN T0014 0  240  241 1XYZ A 0     821     822     0.40   2 
TALIGN T0014 0  242  251 1XYZ A 0     826     835     0.40   2 
REMARK =============================================================
REMARK 
REMARK 
REMARK Alignment read in,    2 sequences, length is 298
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  298  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  298 Check: 100  Weight: 1.00
REMARK Name: 1NIPB Len:  298 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTVTVKNLI IGEGMPKIIV SLMGRDINSV KAEALAYREA TFDILEWRVD 
REMARK 1NIPB  AMR...QCAI YGKGGI.... ....GKSTTT QNLVAALAEM GKKVMIVGCD 
REMARK 
REMARK        51                                                 100
REMARK T0014  HFMDI..... ASTQ.SVLTA ARVIRDAMPD IP.......L L...FTFRSA 
REMARK 1NIPB  PKADSTRLIL HSKAQNTIME MAAEAGTVED LELEDVLKAG YGGVKCVESG 
REMARK 
REMARK        101                                                150
REMARK T0014  KEGGEQTITT QHYLTLNRAA IDSGLVD... .MIDLELFTG DADVKATVDY 
REMARK 1NIPB  GPEPGVGCAG RGVITAINFL EEEGAYEDDL DFVFYDVLGD VVCGGFAMPI 
REMARK 
REMARK        151                                                200
REMARK T0014  AHAHNVYVVM SNHDFHQTPS AEEMVSRLRK MQALGADIP. .KIAVMPQSK 
REMARK 1NIPB  RENKAQEIYI VCSGEMMAMY AANNISKGIV KYANSGSVRL GGLICNSRNT 
REMARK 
REMARK        201                                                250
REMARK T0014  H.DVLTLLTA TLEMQ..QHY ADRPVI.... ....TMS... ...MAKEGVI 
REMARK 1NIPB  DREDELIIAL ANKLGTQMIH FVPRDNVVQR AEIRRMTVIE YDPKAKQADE 
REMARK 
REMARK        251                                              298
REMARK T0014  SRLAGEVFGS AATF...GAV K.QASAPGQI AVN..DLRSV LMILHN.A
REMARK 1NIPB  YRALARKVVD NKLLVIPNPI TMDELEELLM EFGIMEVEDE SIVGKTAE
REMARK 
TALIGN T0014 0    1    3 1NIP B 0       1       3     0.60   1 
TALIGN T0014 0    7   16 1NIP B 0       4      13     0.60   1 
TALIGN T0014 0   25   55 1NIP B 0      14      44     0.60   1 
TALIGN T0014 0   56   59 1NIP B 0      50      53     0.60   1 
TALIGN T0014 0   60   76 1NIP B 0      55      71     0.60   1 
TALIGN T0014 0   77   78 1NIP B 0      79      80     0.60   1 
TALIGN T0014 0   79  111 1NIP B 0      84     116     0.60   1 
TALIGN T0014 0  112  169 1NIP B 0     121     178     0.60   1 
TALIGN T0014 0  170  179 1NIP B 0     181     190     0.60   1 
TALIGN T0014 0  180  192 1NIP B 0     192     204     0.60   1 
TALIGN T0014 0  193  201 1NIP B 0     207     215     0.60   1 
TALIGN T0014 0  202  204 1NIP B 0     224     226     0.60   1 
TALIGN T0014 0  205  225 1NIP B 0     233     253     0.60   1 
TALIGN T0014 0  226  229 1NIP B 0     257     260     0.60   1 
TALIGN T0014 0  230  240 1NIP B 0     262     272     0.60   1 
TALIGN T0014 0  241  251 1NIP B 0     275     285     0.60   1 
TALIGN T0014 0  252  252 1NIP B 0     287     287     0.60   1 
REMARK Alignment read in,    2 sequences, length is 297
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  297  Type: P today Check: 100 ..
REMARK Name: T0014 Len:  297 Check: 100  Weight: 1.00
REMARK Name: 1NIPB Len:  297 Check: 100  Weight: 1.00
REMARK //
REMARK        1                                                   50
REMARK T0014  MKTVTVKNLI IGEGMPKIIV SLMGRDINSV KAEALAYREA TFDILEWRVD 
REMARK 1NIPB  ..AMRQCAIY GKGGI..... ...GKSTTTQ NLVAALAEMG KKVMIVGCDP 
REMARK 
REMARK        51                                                 100
REMARK T0014  HFMD.....I ASTQS.VLTA ARVIRDAMP. DIPLLF.... ...TFRSAKE 
REMARK 1NIPB  KADSTRLILH SKAQNTIMEM AAEAGTVEDL ELEDVLKAGY GGVKCVESGG 
REMARK 
REMARK        101                                                150
REMARK T0014  GGEQTITTQH YLTLNRAAID SG...LVDM. IDLELFTGDA DVKATVDYAH 
REMARK 1NIPB  PEPGVGCAGR GVITAINFLE EEGAYEDDLD FVFYDVLGDV VCGGFAMPIR 
REMARK 
REMARK        151                                                200
REMARK T0014  AHNVYVVMSN HDFHQTPSAE EMVSRLRKMQ ALGADIPKIA VMPQSKHDVL 
REMARK 1NIPB  ENKAQEIYIV CSGEMMAMYA ANNISKGIVK YANSGSVRLG GLICNSRNTD 
REMARK 
REMARK        201                                                250
REMARK T0014  TLLTATLEMQ QHYADRPVIT MSMAKEGVIS RL........ .....AGEVF 
REMARK 1NIPB  REDELIIALA NKLGTQMIHF VPRDNVVQRA EIRRMTVIEY DPKAKQADEY 
REMARK 
REMARK        251                                             297
REMARK T0014  GSAATFGAVK QASAPGQIAV .NDLRSVLMI LH.....N.. ....A..
REMARK 1NIPB  RALARKVVDN KLLVIPNPIT MDELEELLME FGIMEVEDES IVGKTAE
REMARK 
TALIGN T0014 0    3   15 1NIP B 0       1      13     0.40   2 
TALIGN T0014 0   24   54 1NIP B 0      14      44     0.40   2 
TALIGN T0014 0   55   60 1NIP B 0      50      55     0.40   2 
TALIGN T0014 0   61   73 1NIP B 0      57      69     0.40   2 
TALIGN T0014 0   74   79 1NIP B 0      71      76     0.40   2 
TALIGN T0014 0   80  108 1NIP B 0      84     112     0.40   2 
TALIGN T0014 0  109  112 1NIP B 0     116     119     0.40   2 
TALIGN T0014 0  113  214 1NIP B 0     121     222     0.40   2 
TALIGN T0014 0  215  239 1NIP B 0     236     260     0.40   2 
TALIGN T0014 0  240  250 1NIP B 0     262     272     0.40   2 
TALIGN T0014 0  251  251 1NIP B 0     278     278     0.40   2 
TALIGN T0014 0  252  252 1NIP B 0     285     285     0.40   2 
REMARK =============================================================
REMARK 
REMARK 


