


PFRMAT FRV1
REMARK =========================================================================
AUTHOR 1397-4403-4555 John Moult           jmoult@indigo5.carb.nist.gov
AUTHOR 1397-4403-4555 Brett Milash         bmilash@iris5.carb.nist.gov
AUTHOR 1397-4403-4555 Michael Braxenthaler michael@iris3.carb.nist.gov
AUTHOR 1397-4403-4555 Jan Pedersen         jan@indigo7.carb.nist.gov
AUTHOR 1397-4403-4555 Ram Samudrala        ram@elan1.carb.nist.gov
AUTHOR 1397-4403-4555 Rui Luo              rui@iris4.carb.nist.gov
AUTHOR 1397-4403-4555 CARB
AUTHOR 1397-4403-4555 9600 Gudelsky Dr.
AUTHOR 1397-4403-4555 Rockville MD 20850
REMARK =========================================================================
REMARK Summary
REMARK
REMARK This submission contains the prediction of the fold of target T0022
REMARK (L-Fucose-Isomerase from E.coli).
REMARK The overall strategy applied was to combine a wide range of publicly
REMARK available/accessible methods and databases with the intention of
REMARK assessing the potential of additive/synergistic effects on the
REMARK confidence in the prediction resulting from this combined approach.
REMARK
REMARK None of the initially applied methods (sequence comparisons, Hidden
REMARK Markov models, secondary structure predictions, threading (two threaders))
REMARK gave significant results or clear leads towards a structural model for
REMARK this sequence. The breakthrough came from functional considerations,
REMARK i.e. the similarity of the catalytic reaction of Fucose isomerase with
REMARK Xylose isomerase (aldose-ketose isomerisation):
REMARK Energy profiles of the target sequence threaded on Xylose isomerases
REMARK (which scored rather poorly in the threaders) showed stunning similarity
REMARK to the native profiles of Xylose isomerases in the absence of any detectable
REMARK sequence similarity. We consider these profiles sufficiently convincing
REMARK to place 1.0 confidence on the TIM barrel fold of Xylose isomerase 1xim-a.
REMARK
REMARK The ProFit1.0 energy profile is available in PostScript via anonymous ftp
REMARK from iris4.carb.nist.gov as /pub/submission/t0022.e_profile.ps.
REMARK =========================================================================
REMARK
REMARK Methods used
REMARK
REMARK -------------------------------------------------------------------------
REMARK 1. Sequence homology searches
REMARK
REMARK - BLASTP with BLOSUM62/PAM250 (NCBI) against SwissProt and PDB (negative)
REMARK - MPsrch (John F. Collins, Biocomputing Resource Unit,
REMARK   University of Edinburgh, UK) against SwissProt and PDB (negative)
REMARK - HMMER1.8 (Sean Eddy, Washington University, St.Louis, MO) search of a
REMARK   database of hidden markov models built locally from all HSSP (EMBL)
REMARK   alignments (negative)
REMARK
REMARK -------------------------------------------------------------------------
REMARK 2. Secondary structure predictions
REMARK
REMARK Five SS prediction methods were applied:
REMARK - PhD     Rost & Sander (1994) Proteins, 19, 55-72
REMARK - Gibrat  Gibrat et al. (1987) J.Mol.Biol. 198, 425-443
REMARK - Levin   Levin et al. (1986) Febs Lett. 205, 303-308
REMARK - DPM     Deleage & Roux (1987) Prot. Eng. 1, 289-294
REMARK - SOPMA   Geourjon & Deleage (1995) Comput. Applic. Biosci., 11, 681-684
REMARK All methods clearly predict an alpha/beta protein with substantial 
REMARK disagreements mostly in the strand regions.
REMARK
REMARK -------------------------------------------------------------------------
REMARK 3. Threading
REMARK
REMARK Two publicly available threaders were used:
REMARK - Manfred Sippl 	Floeckner et al. (1995) PROTEINS 23, 376-386
REMARK - David Jones	Jones et al. (1995) PROTEINS 23, 387-397
REMARK
REMARK Initially the target sequence was matched against the standard structure
REMARK library for each threader under default conditions (the standard libraries
REMARK are listed below).
REMARK ProFIT0.9 (Sippl) resulted in generally poor scores with best matches on
REMARK small proteins, Threader (Jones) top hits were all-beta proteins. There
REMARK was no agreement between the top ten lists in terms of FSSP classification.
REMARK
REMARK -------------------------------------------------------------------------
REMARK 4. Functional/biological considerations
REMARK
REMARK Arabinose/ribulose isomerization is a side reaction catalyzed by fucose
REMARK isomerase. Based on this property PDB was searched for arabinose binding
REMARK proteins. None of the individual threading alignments of t0022 with
REMARK arabinose binding proteins (e.g. 8abp) produced significant scores.
REMARK In addition, DSSP secondary structure assignments from the template
REMARK structure disagreed with secondary structure predictions for t0022.
REMARK
REMARK Xylose and arabinose have very similar chemical structures, and the
REMARK xylose isomerase reaction is completely analogous to the fucose
REMARK isomerase reaction. Based on this similarity individual threading
REMARK alignments (ProFIT1.0, Sippl) of t0022 with xylose isomerase structures 
REMARK were evaluated using energy profiles (ProFIT1.0). The profiles of the
REMARK t0022 models turned out to be strikingly similar to the native profiles,
REMARK occasionally even more favorable. In these profiles the native structures
REMARK themselves appear in the grey zone between good and bad models, explaining
REMARK the comparatively low Z scores of t0022 on xylose isomerase in the 
REMARK initial threading experiment.
REMARK
REMARK The similarity of the model and native energy profiles was so pronounced
REMARK that the decision on the best model was made based exclusively on these
REMARK profiles.
REMARK
REMARK -------------------------------------------------------------------------
REMARK 5. Conclusion
REMARK
REMARK The best fit was found to be xylose isomerase (1xim-a).
REMARK
REMARK =================================================================
REMARK
REMARK Contents of standard Sippl threader database:
REMARK 119L   1BAB-B 1COM-K 1FB4-H 1HFC   1LTS-A 1PHP   1SCS   2CCY-A 2RSL-C
REMARK 135L   1BAM   1CPC-A 1FDD   1HJR-B 1LVL   1PI2   1SHA-A 2CMD   2SIC-I
REMARK 154L   1BBH-B 1CPC-B 1FHA   1HLB   1MAT   1PII   1SLC-A 2CPL   2SIM  
REMARK 1AAK   1BBK-D 1CRL   1FKB   1HMY   1MBA   1PK4   1SRY-A 2CTC   2SN3  
REMARK 1AAP-A 1BBP-D 1CSE-E 1FLP   1HNF   1MBD   1PLC   1STF-I 2CYP   2TPR-A
REMARK 1ABA   1BDM-B 1CSE-I 1FNA   1HOC-A 1MIN-B 1PLF-D 1STG   2DRI   2TRX-A
REMARK 1ABK   1BET   1CSH   1FNR   1HSB-B 1MJC   1PNT   1TAG   2EBN   3AAH-C
REMARK 1ABM-A 1BLL-E 1CTM   1FRD   1HSL-B 1MMO-C 1POH   1THW   2END   3CD4  
REMARK 1ABR-B 1BNH   1CTN   1FRU-A 1HST-A 1MMO-E 1POX-A 1TIB   2EXO   3CHY  
REMARK 1ACF   1BOP   1CUS   1FUS   1HTR-B 1MMO-G 1PPM-E 1TKB-A 2FX2   3CLA  
REMARK 1ACX   1BOV-A 1CYO   1FXD   1HUC-B 1MOL-A 1PPN   1TML   2GCR   3DFR  
REMARK 1ADD   1BP2   1DHR   1GAL   1HYP   1MRD-L 1PSP-B 1TPB-1 2GST-B 3ECA-A
REMARK 1ADL   1BRN-L 1DLC   1GCA   1HYT   1MRK   1PTX   1TRB   2HAD   3GAP-B
REMARK 1ADS   1BRS-F 1DMB   1GD1-R 1IAB   1NAR   1R69   1TSS-A 2HBG   3MDE-A
REMARK 1AIZ-B 1BTC   1DOC   1GDH-B 1IAG   1NBA-C 1RBL-A 1TYS   2HHM-B 3MT2  
REMARK 1AK3-A 1BTL   1DRF   1GDM   1IDA-A 1NDC   1RBL-M 1UBQ   2HPD-B 4DFR-A
REMARK 1AKA-A 1C2R-B 1DSB-A 1GHR   1IGP   1NDH   1RCB   1UKZ   2LBP   4ENL  
REMARK 1ALD   1CAD   1DYN-B 1GKY   1ILR-2 1NHQ   1RCF   1UTG   2MNR   4FXN  
REMARK 1ALK-A 1CAU-A 1EAF   1GLQ-B 1IPD   1OLB-A 1RHD   1WSY-B 2MSB-A 4I1B  
REMARK 1AMG   1CC5   1ECO   1GLY   1ITH-A 1ONC   1RIB-A 1YDB   2MTA-C 4ICB  
REMARK 1AMP   1CCR   1EFT   1GMF-B 1KBA-A 1OVA-D 1RIS   1YPT-B 2NAC-A 5P21  
REMARK 1AOZ-A 1CDE   1ELD-E 1GMP-B 1LBA   1OVO-D 1RPG   1YTB-A 2PCD-A 6LDH  
REMARK 1APA   1CDG   1ENH   1GYI-B 1LCF   1OYB   1RPL   256B-A 2PEC   7ICD  
REMARK 1APM-E 1CDL-B 1ESL   1HBI-A 1LED   1PAL   1RPO   2AAA   2PFK-C 8ABP  
REMARK 1ARP   1CEL-B 1ETB-2 1HBQ   1LLA   1PAZ   1RVA-B 2ALP   2PGD   8ACN  
REMARK 1ASH   1CEW-I 1EZM   1HCR-A 1LMB-3 1PBP   1SAC-B 2ASR   2POL-A 8ATC-A
REMARK 1ATR   1CFB   1F3G   1HDC-D 1LPB-B 1PGS   1SAS   2BBK-J 2RAN   8ATC-B
REMARK 1AYA-A 1COB-B 1FAS   1HDZ-B 1LPE   1PHD   1SBP   2BLT-B 2RN2   9WGA-B
REMARK 1AYH  
REMARK
REMARK xylose isomerase structures added to Sippl threader database:
REMARK 1AMY   1CYG   1MSS-A 1TPB-2 1XIB   1XLA-A 1XYA-A 2KAU-C 4RUB-A 6TIM-A
REMARK 1DID-A 1XIE   1XIM-A 1XLC-A 1XLH-A 1XYA-A 2GYI-A 3XIN-A 5XIA-A 7XIM-A
REMARK 1DIE-A 1XIF   1XIN-A 1XLD-A 1XLI-A 1XYB-A 2XIM-A 3XIS   5XIM-A 8XIA
REMARK 1DXI-A 1XIG   1XIS   1XLE-A 1XLJ-A 1XYC-A 2XIN-A 4XIA-A 5XIN-A 8XIM-A
REMARK 1XIB   1XIH   1XLA-A 1XLF-A 1XLK-A 1XYL-A 2XIS   4XIM-A 6XIA   9XIA
REMARK 1XIC   1XII   1XLB-A 1XLG-A 1XLL-A 1XYM-A 3XIM-A 4XIS   6XIM-A 9XIM-A
REMARK 1XID   1XIJ
REMARK
REMARK Contents of standard Jones threader database:
REMARK 135L   1BBT-2 1CPT   1GKY   1LTS-A 1PII   1STP   2BOP-A 2PLV-4 3MDS-A
REMARK 1AAJ   1BBT-3 1CSC   1GLA-G 1LTS-C 1PKP   1TAB-I 2BPA-1 2PMG-A 3MON-B
REMARK 1AAK   1BBT-4 1CSE-E 1GLT   1LYA-A 1PLC   1TBP-A 2BPA-2 2POL-A 3PGK  
REMARK 1ABA   1BDS   1CSE-I 1GLU-A 1MAT   1POA   1TEN   2CAS   2REB   3PGM  
REMARK 1ABK   1BGC   1CTF   1GLY   1MDC   1POX-A 1TFI   2CBA   2RHE   3RUB-S
REMARK 1ACO   1BGH   1CY3   1GOF   1MFA   1PPN   1THG   2CDV   2RN2   3SC2-A
REMARK 1ACP   1BHA   1D66-A 1GOX   1MIN-A 1PRC-C 1TML   2CMD   2SIC-I 3SC2-B
REMARK 1ADD   1BIA   1DHR   1GPB   1MIN-B 1PTF   1TNF-A 2CPL   2SN3   4ENL  
REMARK 1ADN   1BLL-E 1DMB   1GPR   1MYP-A 1PYA-A 1TPL-A 2CTC   2SNS   4GCR  
REMARK 1ADS   1BMV-1 1DSB-A 1HCC   1MYP-C 1PYA-B 1TPM   2CTV-A 2STV   4HTC-I
REMARK 1AK3-A 1BMV-2 1ECA   1HLE-A 1NAR   1PYP   1TTA-A 2CYP   2TGI   4SBV-A
REMARK 1ALA   1BRN-L 1EDE   1HMY   1NIP-A 1RAI-A 1TTF   2DNJ-A 2TMD-A 4SGB-I
REMARK 1ALK-A 1BTC   1EGF   1HOE   1NOA   1RAI-B 1ULA   2ER7-E 2TMV-P 5FD1  
REMARK 1AOZ-A 1BW3   1END   1HSB-A 1NSC-A 1RCB   1UTG   2GST-A 2TS1   5P21  
REMARK 1APA   1C5A   1EZM   1HST-A 1OFV   1REC   1VIL   2HHM-A 2TSC-A 5PTI  
REMARK 1APM-E 1CAU-A 1FBA-A 1HUW   1OMA   1RFB-A 1VSG-A 2HPD-A 3B5C   5RUB-A
REMARK 1APS   1CD8   1FC2-D 1HYP   1OVB   1RHD   1WSY-A 2LBP   3BCL   5TIM-A
REMARK 1ARB   1CDB   1FIA-A 1I1B   1PBA   1RIB-A 1WSY-B 2LTN-A 3BLM   6INS-E
REMARK 1ARQ-A 1CDE   1FKB   1IPD   1PDA   1RRO   1XIS   2LTN-B 3CLA   7AAT-A
REMARK 1ATN-A 1CDG   1FNR   1KST   1PDC   1RVE-A 1YCC   2MNR   3DFR   7CAT-A
REMARK 1ATR   1CEW-I 1FUS   1LAB   1PFK-A 1SBP   1ZAA-C 2MSB-A 3EBX   7RSA  
REMARK 1ATX   1CMB-A 1FXD   1LCT   1PGD   1SHA-A 256B-A 2NCK-L 3ECA-A 8ABP  
REMARK 1AYH   1COB-A 1GAL   1LFI   1PGX   1SHG   2AAI-B 2OHX-A 3GAP-A 8FAB-B
REMARK 1BAL   1COL-A 1GAT-A 1LIS   1PHA   1SIM   2BBK-H 2OVO   3GRS   8RXN-A
REMARK 1BBP-A 1COY   1GD1-O 1LLA   1PHH   1SRY-A 2BBK-L 2PIA   3IL8   9WGA-A
REMARK 1BBT-1 1CPC-A 1GDH-A 1LMB-3
REMARK 
REMARK xylose isomerase structures added to Jones threader database:
REMARK 1DID-A 1XIE   1XIM-A 1XLC-A 1XLH-A 1XYA-A 2GYI-A 3XIN-A  5XIA-A 7XIM-A
REMARK 1DIE-A 1XIF   1XIN-A 1XLD-A 1XLI-A 1XYB-A 2XIM-A 3XIS    5XIM-A 8XIA
REMARK 1DXI-A 1XIG   1XIS   1XLE-A 1XLJ-A 1XYC-A 2XIN-A 4XIA-A  5XIN-A 8XIM-A
REMARK 1XIB   1XIH   1XLA-A 1XLF-A 1XLK-A 1XYL-A 2XIS   4XIM-A  6XIA   9XIA
REMARK 1XIC   1XII   1XLB-A 1XLG-A 1XLL-A 1XYM-A 3XIM-A 4XIS    6XIM-A 9XIM-A
REMARK 1XID   1XIJ
REMARK =================================================================
SEQRES T0022 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDT
SEQRES T0022 CIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVY
SEQRES T0022 LAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSL
SEQRES T0022 GGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY
SEQRES T0022 GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQ
SEQRES T0022 GQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGTAQVFA
SEQRES T0022 DVRTYWSPEAIERVTGHKLDGLAEHGIIHLINSGSAALDGSCKQRDSEGNPTMKPHWEIS
SEQRES T0022 QQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWS
SEQRES T0022 VELPKDVHDILNKRTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADF
SEQRES T0022 ITLASMLRIPVCMHNVEETKVYRPSAWAAHGMDIEGQDYRACQNYGPLYKR
REMARK =================================================================
TSCORE T0022 0  1.00    1XIM A 0
TSCORE T0022 0  0.00    119L - 0
TSCORE T0022 0  0.00    135L - 0
TSCORE T0022 0  0.00    154L - 0
TSCORE T0022 0  0.00    1AAJ - 0
TSCORE T0022 0  0.00    1AAK - 0
TSCORE T0022 0  0.00    1AAP A 0
TSCORE T0022 0  0.00    1ABA - 0
TSCORE T0022 0  0.00    1ABK - 0
TSCORE T0022 0  0.00    1ABM A 0
TSCORE T0022 0  0.00    1ABR B 0
TSCORE T0022 0  0.00    1ACF - 0
TSCORE T0022 0  0.00    1ACO - 0
TSCORE T0022 0  0.00    1ACP - 0
TSCORE T0022 0  0.00    1ACX - 0
TSCORE T0022 0  0.00    1ADD - 0
TSCORE T0022 0  0.00    1ADL - 0
TSCORE T0022 0  0.00    1ADN - 0
TSCORE T0022 0  0.00    1ADS - 0
TSCORE T0022 0  0.00    1AIZ B 0
TSCORE T0022 0  0.00    1AK3 A 0
TSCORE T0022 0  0.00    1AKA A 0
TSCORE T0022 0  0.00    1ALA - 0
TSCORE T0022 0  0.00    1ALD - 0
TSCORE T0022 0  0.00    1ALK A 0
TSCORE T0022 0  0.00    1AMG - 0
TSCORE T0022 0  0.00    1AMP - 0
TSCORE T0022 0  0.00    1AMY - 0
TSCORE T0022 0  0.00    1AOZ A 0
TSCORE T0022 0  0.00    1APA - 0
TSCORE T0022 0  0.00    1APM E 0
TSCORE T0022 0  0.00    1APS - 0
TSCORE T0022 0  0.00    1ARB - 0
TSCORE T0022 0  0.00    1ARP - 0
TSCORE T0022 0  0.00    1ARQ A 0
TSCORE T0022 0  0.00    1ASH - 0
TSCORE T0022 0  0.00    1ATN A 0
TSCORE T0022 0  0.00    1ATR - 0
TSCORE T0022 0  0.00    1ATX - 0
TSCORE T0022 0  0.00    1AYA A 0
TSCORE T0022 0  0.00    1AYH - 0
TSCORE T0022 0  0.00    1BAB B 0
TSCORE T0022 0  0.00    1BAL - 0
TSCORE T0022 0  0.00    1BAM - 0
TSCORE T0022 0  0.00    1BBH B 0
TSCORE T0022 0  0.00    1BBK D 0
TSCORE T0022 0  0.00    1BBP A 0
TSCORE T0022 0  0.00    1BBP D 0
TSCORE T0022 0  0.00    1BBT 1 0
TSCORE T0022 0  0.00    1BBT 2 0
TSCORE T0022 0  0.00    1BBT 3 0
TSCORE T0022 0  0.00    1BBT 4 0
TSCORE T0022 0  0.00    1BDM B 0
TSCORE T0022 0  0.00    1BDS - 0
TSCORE T0022 0  0.00    1BET - 0
TSCORE T0022 0  0.00    1BGC - 0
TSCORE T0022 0  0.00    1BGH - 0
TSCORE T0022 0  0.00    1BHA - 0
TSCORE T0022 0  0.00    1BIA - 0
TSCORE T0022 0  0.00    1BLL E 0
TSCORE T0022 0  0.00    1BMV 1 0
TSCORE T0022 0  0.00    1BMV 2 0
TSCORE T0022 0  0.00    1BNH - 0
TSCORE T0022 0  0.00    1BOP - 0
TSCORE T0022 0  0.00    1BOV A 0
TSCORE T0022 0  0.00    1BP2 - 0
TSCORE T0022 0  0.00    1BRN L 0
TSCORE T0022 0  0.00    1BRS F 0
TSCORE T0022 0  0.00    1BTC - 0
TSCORE T0022 0  0.00    1BTL - 0
TSCORE T0022 0  0.00    1BW3 - 0
TSCORE T0022 0  0.00    1C2R B 0
TSCORE T0022 0  0.00    1C5A - 0
TSCORE T0022 0  0.00    1CAD - 0
TSCORE T0022 0  0.00    1CAU A 0
TSCORE T0022 0  0.00    1CC5 - 0
TSCORE T0022 0  0.00    1CCR - 0
TSCORE T0022 0  0.00    1CD8 - 0
TSCORE T0022 0  0.00    1CDB - 0
TSCORE T0022 0  0.00    1CDE - 0
TSCORE T0022 0  0.00    1CDG - 0
TSCORE T0022 0  0.00    1CDL B 0
TSCORE T0022 0  0.00    1CEL B 0
TSCORE T0022 0  0.00    1CEW I 0
TSCORE T0022 0  0.00    1CFB - 0
TSCORE T0022 0  0.00    1CMB A 0
TSCORE T0022 0  0.00    1COB A 0
TSCORE T0022 0  0.00    1COB B 0
TSCORE T0022 0  0.00    1COL A 0
TSCORE T0022 0  0.00    1COM K 0
TSCORE T0022 0  0.00    1COY - 0
TSCORE T0022 0  0.00    1CPC A 0
TSCORE T0022 0  0.00    1CPC B 0
TSCORE T0022 0  0.00    1CPT - 0
TSCORE T0022 0  0.00    1CRL - 0
TSCORE T0022 0  0.00    1CSC - 0
TSCORE T0022 0  0.00    1CSE E 0
TSCORE T0022 0  0.00    1CSE I 0
TSCORE T0022 0  0.00    1CSH - 0
TSCORE T0022 0  0.00    1CTF - 0
TSCORE T0022 0  0.00    1CTM - 0
TSCORE T0022 0  0.00    1CTN - 0
TSCORE T0022 0  0.00    1CUS - 0
TSCORE T0022 0  0.00    1CY3 - 0
TSCORE T0022 0  0.00    1CYG - 0
TSCORE T0022 0  0.00    1CYO - 0
TSCORE T0022 0  0.00    1D66 A 0
TSCORE T0022 0  0.00    1DHR - 0
TSCORE T0022 0  0.00    1DID A 0
TSCORE T0022 0  0.00    1DIE A 0
TSCORE T0022 0  0.00    1DLC - 0
TSCORE T0022 0  0.00    1DMB - 0
TSCORE T0022 0  0.00    1DOC - 0
TSCORE T0022 0  0.00    1DRF - 0
TSCORE T0022 0  0.00    1DSB A 0
TSCORE T0022 0  0.00    1DXI A 0
TSCORE T0022 0  0.00    1DYN B 0
TSCORE T0022 0  0.00    1EAF - 0
TSCORE T0022 0  0.00    1ECA - 0
TSCORE T0022 0  0.00    1ECO - 0
TSCORE T0022 0  0.00    1EDE - 0
TSCORE T0022 0  0.00    1EFT - 0
TSCORE T0022 0  0.00    1EGF - 0
TSCORE T0022 0  0.00    1ELD E 0
TSCORE T0022 0  0.00    1END - 0
TSCORE T0022 0  0.00    1ENH - 0
TSCORE T0022 0  0.00    1ESL - 0
TSCORE T0022 0  0.00    1ETB 2 0
TSCORE T0022 0  0.00    1EZM - 0
TSCORE T0022 0  0.00    1F3G - 0
TSCORE T0022 0  0.00    1FAS - 0
TSCORE T0022 0  0.00    1FB4 H 0
TSCORE T0022 0  0.00    1FBA A 0
TSCORE T0022 0  0.00    1FC2 D 0
TSCORE T0022 0  0.00    1FDD - 0
TSCORE T0022 0  0.00    1FHA - 0
TSCORE T0022 0  0.00    1FIA A 0
TSCORE T0022 0  0.00    1FKB - 0
TSCORE T0022 0  0.00    1FLP - 0
TSCORE T0022 0  0.00    1FNA - 0
TSCORE T0022 0  0.00    1FNR - 0
TSCORE T0022 0  0.00    1FRD - 0
TSCORE T0022 0  0.00    1FRU A 0
TSCORE T0022 0  0.00    1FUS - 0
TSCORE T0022 0  0.00    1FXD - 0
TSCORE T0022 0  0.00    1GAL - 0
TSCORE T0022 0  0.00    1GAT A 0
TSCORE T0022 0  0.00    1GCA - 0
TSCORE T0022 0  0.00    1GD1 O 0
TSCORE T0022 0  0.00    1GD1 R 0
TSCORE T0022 0  0.00    1GDH A 0
TSCORE T0022 0  0.00    1GDH B 0
TSCORE T0022 0  0.00    1GDM - 0
TSCORE T0022 0  0.00    1GHR - 0
TSCORE T0022 0  0.00    1GKY - 0
TSCORE T0022 0  0.00    1GLA G 0
TSCORE T0022 0  0.00    1GLQ B 0
TSCORE T0022 0  0.00    1GLT - 0
TSCORE T0022 0  0.00    1GLU A 0
TSCORE T0022 0  0.00    1GLY - 0
TSCORE T0022 0  0.00    1GMF B 0
TSCORE T0022 0  0.00    1GMP B 0
TSCORE T0022 0  0.00    1GOF - 0
TSCORE T0022 0  0.00    1GOX - 0
TSCORE T0022 0  0.00    1GPB - 0
TSCORE T0022 0  0.00    1GPR - 0
TSCORE T0022 0  0.00    1GYI B 0
TSCORE T0022 0  0.00    1HBI A 0
TSCORE T0022 0  0.00    1HBQ - 0
TSCORE T0022 0  0.00    1HCC - 0
TSCORE T0022 0  0.00    1HCR A 0
TSCORE T0022 0  0.00    1HDC D 0
TSCORE T0022 0  0.00    1HDZ B 0
TSCORE T0022 0  0.00    1HFC - 0
TSCORE T0022 0  0.00    1HJR B 0
TSCORE T0022 0  0.00    1HLB - 0
TSCORE T0022 0  0.00    1HLE A 0
TSCORE T0022 0  0.00    1HMY - 0
TSCORE T0022 0  0.00    1HNF - 0
TSCORE T0022 0  0.00    1HOC A 0
TSCORE T0022 0  0.00    1HOE - 0
TSCORE T0022 0  0.00    1HSB A 0
TSCORE T0022 0  0.00    1HSB B 0
TSCORE T0022 0  0.00    1HSL B 0
TSCORE T0022 0  0.00    1HST A 0
TSCORE T0022 0  0.00    1HTR B 0
TSCORE T0022 0  0.00    1HUC B 0
TSCORE T0022 0  0.00    1HUW - 0
TSCORE T0022 0  0.00    1HYP - 0
TSCORE T0022 0  0.00    1HYT - 0
TSCORE T0022 0  0.00    1I1B - 0
TSCORE T0022 0  0.00    1IAB - 0
TSCORE T0022 0  0.00    1IAG - 0
TSCORE T0022 0  0.00    1IDA A 0
TSCORE T0022 0  0.00    1IGP - 0
TSCORE T0022 0  0.00    1ILR 2 0
TSCORE T0022 0  0.00    1IPD - 0
TSCORE T0022 0  0.00    1ITH A 0
TSCORE T0022 0  0.00    1KBA A 0
TSCORE T0022 0  0.00    1KST - 0
TSCORE T0022 0  0.00    1LAB - 0
TSCORE T0022 0  0.00    1LBA - 0
TSCORE T0022 0  0.00    1LCF - 0
TSCORE T0022 0  0.00    1LCT - 0
TSCORE T0022 0  0.00    1LED - 0
TSCORE T0022 0  0.00    1LFI - 0
TSCORE T0022 0  0.00    1LIS - 0
TSCORE T0022 0  0.00    1LLA - 0
TSCORE T0022 0  0.00    1LMB 3 0
TSCORE T0022 0  0.00    1LPB B 0
TSCORE T0022 0  0.00    1LPE - 0
TSCORE T0022 0  0.00    1LTS A 0
TSCORE T0022 0  0.00    1LTS C 0
TSCORE T0022 0  0.00    1LVL - 0
TSCORE T0022 0  0.00    1LYA A 0
TSCORE T0022 0  0.00    1MAT - 0
TSCORE T0022 0  0.00    1MBA - 0
TSCORE T0022 0  0.00    1MBD - 0
TSCORE T0022 0  0.00    1MDC - 0
TSCORE T0022 0  0.00    1MFA - 0
TSCORE T0022 0  0.00    1MIN A 0
TSCORE T0022 0  0.00    1MIN B 0
TSCORE T0022 0  0.00    1MJC - 0
TSCORE T0022 0  0.00    1MMO C 0
TSCORE T0022 0  0.00    1MMO E 0
TSCORE T0022 0  0.00    1MMO G 0
TSCORE T0022 0  0.00    1MOL A 0
TSCORE T0022 0  0.00    1MRD L 0
TSCORE T0022 0  0.00    1MRK - 0
TSCORE T0022 0  0.00    1MSS A 0
TSCORE T0022 0  0.00    1MYP A 0
TSCORE T0022 0  0.00    1MYP C 0
TSCORE T0022 0  0.00    1NAR - 0
TSCORE T0022 0  0.00    1NBA C 0
TSCORE T0022 0  0.00    1NDC - 0
TSCORE T0022 0  0.00    1NDH - 0
TSCORE T0022 0  0.00    1NHQ - 0
TSCORE T0022 0  0.00    1NIP A 0
TSCORE T0022 0  0.00    1NOA - 0
TSCORE T0022 0  0.00    1NSC A 0
TSCORE T0022 0  0.00    1OFV - 0
TSCORE T0022 0  0.00    1OLB A 0
TSCORE T0022 0  0.00    1OMA - 0
TSCORE T0022 0  0.00    1ONC - 0
TSCORE T0022 0  0.00    1OVA D 0
TSCORE T0022 0  0.00    1OVB - 0
TSCORE T0022 0  0.00    1OVO D 0
TSCORE T0022 0  0.00    1OYB - 0
TSCORE T0022 0  0.00    1PAL - 0
TSCORE T0022 0  0.00    1PAZ - 0
TSCORE T0022 0  0.00    1PBA - 0
TSCORE T0022 0  0.00    1PBP - 0
TSCORE T0022 0  0.00    1PDA - 0
TSCORE T0022 0  0.00    1PDC - 0
TSCORE T0022 0  0.00    1PFK A 0
TSCORE T0022 0  0.00    1PGD - 0
TSCORE T0022 0  0.00    1PGS - 0
TSCORE T0022 0  0.00    1PGX - 0
TSCORE T0022 0  0.00    1PHA - 0
TSCORE T0022 0  0.00    1PHD - 0
TSCORE T0022 0  0.00    1PHH - 0
TSCORE T0022 0  0.00    1PHP - 0
TSCORE T0022 0  0.00    1PI2 - 0
TSCORE T0022 0  0.00    1PII - 0
TSCORE T0022 0  0.00    1PK4 - 0
TSCORE T0022 0  0.00    1PKP - 0
TSCORE T0022 0  0.00    1PLC - 0
TSCORE T0022 0  0.00    1PLF D 0
TSCORE T0022 0  0.00    1PNT - 0
TSCORE T0022 0  0.00    1POA - 0
TSCORE T0022 0  0.00    1POH - 0
TSCORE T0022 0  0.00    1POX A 0
TSCORE T0022 0  0.00    1PPM E 0
TSCORE T0022 0  0.00    1PPN - 0
TSCORE T0022 0  0.00    1PRC C 0
TSCORE T0022 0  0.00    1PSP B 0
TSCORE T0022 0  0.00    1PTF - 0
TSCORE T0022 0  0.00    1PTX - 0
TSCORE T0022 0  0.00    1PYA A 0
TSCORE T0022 0  0.00    1PYA B 0
TSCORE T0022 0  0.00    1PYP - 0
TSCORE T0022 0  0.00    1R69 - 0
TSCORE T0022 0  0.00    1RAI A 0
TSCORE T0022 0  0.00    1RAI B 0
TSCORE T0022 0  0.00    1RBL A 0
TSCORE T0022 0  0.00    1RBL M 0
TSCORE T0022 0  0.00    1RCB - 0
TSCORE T0022 0  0.00    1RCF - 0
TSCORE T0022 0  0.00    1REC - 0
TSCORE T0022 0  0.00    1RFB A 0
TSCORE T0022 0  0.00    1RHD - 0
TSCORE T0022 0  0.00    1RIB A 0
TSCORE T0022 0  0.00    1RIS - 0
TSCORE T0022 0  0.00    1RPG - 0
TSCORE T0022 0  0.00    1RPL - 0
TSCORE T0022 0  0.00    1RPO - 0
TSCORE T0022 0  0.00    1RRO - 0
TSCORE T0022 0  0.00    1RVA B 0
TSCORE T0022 0  0.00    1RVE A 0
TSCORE T0022 0  0.00    1SAC B 0
TSCORE T0022 0  0.00    1SAS - 0
TSCORE T0022 0  0.00    1SBP - 0
TSCORE T0022 0  0.00    1SCS - 0
TSCORE T0022 0  0.00    1SHA A 0
TSCORE T0022 0  0.00    1SHG - 0
TSCORE T0022 0  0.00    1SIM - 0
TSCORE T0022 0  0.00    1SLC A 0
TSCORE T0022 0  0.00    1SRY A 0
TSCORE T0022 0  0.00    1STF I 0
TSCORE T0022 0  0.00    1STG - 0
TSCORE T0022 0  0.00    1STP - 0
TSCORE T0022 0  0.00    1TAB I 0
TSCORE T0022 0  0.00    1TAG - 0
TSCORE T0022 0  0.00    1TBP A 0
TSCORE T0022 0  0.00    1TEN - 0
TSCORE T0022 0  0.00    1TFI - 0
TSCORE T0022 0  0.00    1THG - 0
TSCORE T0022 0  0.00    1THW - 0
TSCORE T0022 0  0.00    1TIB - 0
TSCORE T0022 0  0.00    1TKB A 0
TSCORE T0022 0  0.00    1TML - 0
TSCORE T0022 0  0.00    1TNF A 0
TSCORE T0022 0  0.00    1TPB 1 0
TSCORE T0022 0  0.00    1TPB 2 0
TSCORE T0022 0  0.00    1TPL A 0
TSCORE T0022 0  0.00    1TPM - 0
TSCORE T0022 0  0.00    1TRB - 0
TSCORE T0022 0  0.00    1TSS A 0
TSCORE T0022 0  0.00    1TTA A 0
TSCORE T0022 0  0.00    1TTF - 0
TSCORE T0022 0  0.00    1TYS - 0
TSCORE T0022 0  0.00    1UBQ - 0
TSCORE T0022 0  0.00    1UKZ - 0
TSCORE T0022 0  0.00    1ULA - 0
TSCORE T0022 0  0.00    1UTG - 0
TSCORE T0022 0  0.00    1VIL - 0
TSCORE T0022 0  0.00    1VSG A 0
TSCORE T0022 0  0.00    1WSY A 0
TSCORE T0022 0  0.00    1WSY B 0
TSCORE T0022 0  0.00    1XIB - 0
TSCORE T0022 0  0.00    1XIC - 0
TSCORE T0022 0  0.00    1XID - 0
TSCORE T0022 0  0.00    1XIE - 0
TSCORE T0022 0  0.00    1XIF - 0
TSCORE T0022 0  0.00    1XIG - 0
TSCORE T0022 0  0.00    1XIH - 0
TSCORE T0022 0  0.00    1XII - 0
TSCORE T0022 0  0.00    1XIJ - 0
TSCORE T0022 0  0.00    1XIN A 0
TSCORE T0022 0  0.00    1XIS - 0
TSCORE T0022 0  0.00    1XLA A 0
TSCORE T0022 0  0.00    1XLB A 0
TSCORE T0022 0  0.00    1XLC A 0
TSCORE T0022 0  0.00    1XLD A 0
TSCORE T0022 0  0.00    1XLE A 0
TSCORE T0022 0  0.00    1XLF A 0
TSCORE T0022 0  0.00    1XLG A 0
TSCORE T0022 0  0.00    1XLH A 0
TSCORE T0022 0  0.00    1XLI A 0
TSCORE T0022 0  0.00    1XLJ A 0
TSCORE T0022 0  0.00    1XLK A 0
TSCORE T0022 0  0.00    1XLL A 0
TSCORE T0022 0  0.00    1XYA A 0
TSCORE T0022 0  0.00    1XYB A 0
TSCORE T0022 0  0.00    1XYC A 0
TSCORE T0022 0  0.00    1XYL A 0
TSCORE T0022 0  0.00    1XYM A 0
TSCORE T0022 0  0.00    1YCC - 0
TSCORE T0022 0  0.00    1YDB - 0
TSCORE T0022 0  0.00    1YPT B 0
TSCORE T0022 0  0.00    1YTB A 0
TSCORE T0022 0  0.00    1ZAA C 0
TSCORE T0022 0  0.00    256B A 0
TSCORE T0022 0  0.00    2AAA - 0
TSCORE T0022 0  0.00    2AAI B 0
TSCORE T0022 0  0.00    2ALP - 0
TSCORE T0022 0  0.00    2ASR - 0
TSCORE T0022 0  0.00    2BBK H 0
TSCORE T0022 0  0.00    2BBK J 0
TSCORE T0022 0  0.00    2BBK L 0
TSCORE T0022 0  0.00    2BLT B 0
TSCORE T0022 0  0.00    2BOP A 0
TSCORE T0022 0  0.00    2BPA 1 0
TSCORE T0022 0  0.00    2BPA 2 0
TSCORE T0022 0  0.00    2CAS - 0
TSCORE T0022 0  0.00    2CBA - 0
TSCORE T0022 0  0.00    2CCY A 0
TSCORE T0022 0  0.00    2CDV - 0
TSCORE T0022 0  0.00    2CMD - 0
TSCORE T0022 0  0.00    2CPL - 0
TSCORE T0022 0  0.00    2CTC - 0
TSCORE T0022 0  0.00    2CTV A 0
TSCORE T0022 0  0.00    2CYP - 0
TSCORE T0022 0  0.00    2DNJ A 0
TSCORE T0022 0  0.00    2DRI - 0
TSCORE T0022 0  0.00    2EBN - 0
TSCORE T0022 0  0.00    2END - 0
TSCORE T0022 0  0.00    2ER7 E 0
TSCORE T0022 0  0.00    2EXO - 0
TSCORE T0022 0  0.00    2FX2 - 0
TSCORE T0022 0  0.00    2GCR - 0
TSCORE T0022 0  0.00    2GST A 0
TSCORE T0022 0  0.00    2GST B 0
TSCORE T0022 0  0.00    2GYI A 0
TSCORE T0022 0  0.00    2HAD - 0
TSCORE T0022 0  0.00    2HBG - 0
TSCORE T0022 0  0.00    2HHM A 0
TSCORE T0022 0  0.00    2HHM B 0
TSCORE T0022 0  0.00    2HPD A 0
TSCORE T0022 0  0.00    2HPD B 0
TSCORE T0022 0  0.00    2KAU C 0
TSCORE T0022 0  0.00    2LBP - 0
TSCORE T0022 0  0.00    2LTN A 0
TSCORE T0022 0  0.00    2LTN B 0
TSCORE T0022 0  0.00    2MNR - 0
TSCORE T0022 0  0.00    2MSB A 0
TSCORE T0022 0  0.00    2MTA C 0
TSCORE T0022 0  0.00    2NAC A 0
TSCORE T0022 0  0.00    2NCK L 0
TSCORE T0022 0  0.00    2OHX A 0
TSCORE T0022 0  0.00    2OVO - 0
TSCORE T0022 0  0.00    2PCD A 0
TSCORE T0022 0  0.00    2PEC - 0
TSCORE T0022 0  0.00    2PFK C 0
TSCORE T0022 0  0.00    2PGD - 0
TSCORE T0022 0  0.00    2PIA - 0
TSCORE T0022 0  0.00    2PLV 4 0
TSCORE T0022 0  0.00    2PMG A 0
TSCORE T0022 0  0.00    2POL A 0
TSCORE T0022 0  0.00    2RAN - 0
TSCORE T0022 0  0.00    2REB - 0
TSCORE T0022 0  0.00    2RHE - 0
TSCORE T0022 0  0.00    2RN2 - 0
TSCORE T0022 0  0.00    2RSL C 0
TSCORE T0022 0  0.00    2SIC I 0
TSCORE T0022 0  0.00    2SIM - 0
TSCORE T0022 0  0.00    2SN3 - 0
TSCORE T0022 0  0.00    2SNS - 0
TSCORE T0022 0  0.00    2STV - 0
TSCORE T0022 0  0.00    2TGI - 0
TSCORE T0022 0  0.00    2TMD A 0
TSCORE T0022 0  0.00    2TMV P 0
TSCORE T0022 0  0.00    2TPR A 0
TSCORE T0022 0  0.00    2TRX A 0
TSCORE T0022 0  0.00    2TS1 - 0
TSCORE T0022 0  0.00    2TSC A 0
TSCORE T0022 0  0.00    2XIM A 0
TSCORE T0022 0  0.00    2XIN A 0
TSCORE T0022 0  0.00    2XIS - 0
TSCORE T0022 0  0.00    3AAH C 0
TSCORE T0022 0  0.00    3B5C - 0
TSCORE T0022 0  0.00    3BCL - 0
TSCORE T0022 0  0.00    3BLM - 0
TSCORE T0022 0  0.00    3CD4 - 0
TSCORE T0022 0  0.00    3CHY - 0
TSCORE T0022 0  0.00    3CLA - 0
TSCORE T0022 0  0.00    3DFR - 0
TSCORE T0022 0  0.00    3EBX - 0
TSCORE T0022 0  0.00    3ECA A 0
TSCORE T0022 0  0.00    3GAP A 0
TSCORE T0022 0  0.00    3GAP B 0
TSCORE T0022 0  0.00    3GRS - 0
TSCORE T0022 0  0.00    3IL8 - 0
TSCORE T0022 0  0.00    3MDE A 0
TSCORE T0022 0  0.00    3MDS A 0
TSCORE T0022 0  0.00    3MON B 0
TSCORE T0022 0  0.00    3MT2 - 0
TSCORE T0022 0  0.00    3PGK - 0
TSCORE T0022 0  0.00    3PGM - 0
TSCORE T0022 0  0.00    3RUB S 0
TSCORE T0022 0  0.00    3SC2 A 0
TSCORE T0022 0  0.00    3SC2 B 0
TSCORE T0022 0  0.00    3XIM A 0
TSCORE T0022 0  0.00    3XIN A 0
TSCORE T0022 0  0.00    3XIS - 0
TSCORE T0022 0  0.00    4DFR A 0
TSCORE T0022 0  0.00    4ENL - 0
TSCORE T0022 0  0.00    4FXN - 0
TSCORE T0022 0  0.00    4GCR - 0
TSCORE T0022 0  0.00    4HTC I 0
TSCORE T0022 0  0.00    4I1B - 0
TSCORE T0022 0  0.00    4ICB - 0
TSCORE T0022 0  0.00    4RUB A 0
TSCORE T0022 0  0.00    4SBV A 0
TSCORE T0022 0  0.00    4SGB I 0
TSCORE T0022 0  0.00    4XIA A 0
TSCORE T0022 0  0.00    4XIM A 0
TSCORE T0022 0  0.00    4XIS - 0
TSCORE T0022 0  0.00    5FD1 - 0
TSCORE T0022 0  0.00    5P21 - 0
TSCORE T0022 0  0.00    5PTI - 0
TSCORE T0022 0  0.00    5RUB A 0
TSCORE T0022 0  0.00    5TIM A 0
TSCORE T0022 0  0.00    5XIA A 0
TSCORE T0022 0  0.00    5XIM A 0
TSCORE T0022 0  0.00    5XIN A 0
TSCORE T0022 0  0.00    6INS E 0
TSCORE T0022 0  0.00    6LDH - 0
TSCORE T0022 0  0.00    6TIM A 0
TSCORE T0022 0  0.00    6XIA - 0
TSCORE T0022 0  0.00    6XIM A 0
TSCORE T0022 0  0.00    7AAT A 0
TSCORE T0022 0  0.00    7CAT A 0
TSCORE T0022 0  0.00    7ICD - 0
TSCORE T0022 0  0.00    7RSA - 0
TSCORE T0022 0  0.00    7XIM A 0
TSCORE T0022 0  0.00    8ABP - 0
TSCORE T0022 0  0.00    8ACN - 0
TSCORE T0022 0  0.00    8ATC A 0
TSCORE T0022 0  0.00    8ATC B 0
TSCORE T0022 0  0.00    8FAB B 0
TSCORE T0022 0  0.00    8RXN A 0
TSCORE T0022 0  0.00    8XIA - 0
TSCORE T0022 0  0.00    8XIM A 0
TSCORE T0022 0  0.00    9WGA A 0
TSCORE T0022 0  0.00    9WGA B 0
TSCORE T0022 0  0.00    9XIA - 0
TSCORE T0022 0  0.00    9XIM A 0
REMARK =================================================================
REMARK alignment records (20) for alignment of t0022 with 1xim-a by Profit1.0.
TALIGN T0022 0    2   12        1XIM A 0          3   13        1.0     1
TALIGN T0022 0   16   48        1XIM A 0         14   46        1.0     1
TALIGN T0022 0   51   67        1XIM A 0         47   63        1.0     1
TALIGN T0022 0   68   79        1XIM A 0         68   79        1.0     1
TALIGN T0022 0   80   96        1XIM A 0         82   98        1.0     1
TALIGN T0022 0  103  112        1XIM A 0         99  108        1.0     1
TALIGN T0022 0  113  152        1XIM A 0        111  150        1.0     1
TALIGN T0022 0  153  172        1XIM A 0        152  171        1.0     1
TALIGN T0022 0  181  204        1XIM A 0        172  195        1.0     1
TALIGN T0022 0  207  217        1XIM A 0        196  206        1.0     1
TALIGN T0022 0  222  231        1XIM A 0        207  216        1.0     1
TALIGN T0022 0  234  244        1XIM A 0        217  227        1.0     1
TALIGN T0022 0  252  278        1XIM A 0        228  254        1.0     1
TALIGN T0022 0  279  299        1XIM A 0        256  276        1.0     1
TALIGN T0022 0  308  310        1XIM A 0        277  279        1.0     1
TALIGN T0022 0  314  323        1XIM A 0        280  289        1.0     1
TALIGN T0022 0  330  377        1XIM A 0        290  337        1.0     1
TALIGN T0022 0  388  423        1XIM A 0        338  373        1.0     1
TALIGN T0022 0  425  441        1XIM A 0        374  390        1.0     1
TALIGN T0022 0  452  455        1XIM A 0        391  394        1.0     1
REMARK =================================================================


