
PFRMAT FRV1
REMARK ===================================================================
REMARK Threading results. 
REMARK ===================================================================
REMARK Details about the method used (unpublished):
REMARK 1) Score: 
REMARK It is a modified form of the "Hydrophobic Fitness" proposed by
REMARK E.S. Huang, S. Subbiah and M. Levitt (JMB 252, p709-720, 1995)
REMARK (it is supplemented by ... an "hydrophilic" term).
REMARK 2) Algorithm:
REMARK The optimal alignment is seeked with a Metropolis algorithm,
REMARK the environment of each residue being updated at each step.
REMARK Some Residues in loops were not taken into account
REMARK (those for which structural information is not available).
REMARK 3) Database:
REMARK The set of representative structures compiled by
REMARK C.A. Orengo, T.P. Flores, W.R. Taylor and J.M. Thornton
REMARK (Protein Eng. 6, p485-500, 1993).
REMARK ===================================================================
AUTHOR 9194-9968-8388 Y.-H. Sanejouand
AUTHOR 9194-9968-8388 Laboratoire de Physique Quantique, UMR 5626 of CNRS.
AUTHOR 9194-9968-8388 IRSAMC, Universite Paul Sabatier, Toulouse (France).
REMARK ===================================================================
REMARK arginine repressor protein - Escherichia coli
SEQRES T0026 MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRN
SEQRES T0026 AKMEMVYCLPAELGVPTTS
REMARK ===================================================================
TSCORE T0026 0  0.0     1ACE - 0
TSCORE T0026 0  0.0     1ACX - 0
TSCORE T0026 0  0.0     1ALD - 0
TSCORE T0026 0  0.0     1COL A 0
TSCORE T0026 0  0.0     1CSC - 0
TSCORE T0026 0  0.0     1CSE E 0
TSCORE T0026 0  0.05    1CTF - 0
TSCORE T0026 0  0.0     1ECD - 0
TSCORE T0026 0  0.0     1ETU - 0
TSCORE T0026 0  0.0     1F3G - 0
TSCORE T0026 0  0.0     1FBP A 0
TSCORE T0026 0  0.0     1FCB A 0
TSCORE T0026 0  0.0     1FKF - 0
TSCORE T0026 0  0.0     1GD1 O 0
TSCORE T0026 0  0.0     1GKY - 0
TSCORE T0026 0  0.0     1GMF A 0
TSCORE T0026 0  0.0     1GOX - 0
TSCORE T0026 0  0.0     1GST A 0
TSCORE T0026 0  0.05    1HDD D 0
TSCORE T0026 0  0.0     1HGE A 0
TSCORE T0026 0  0.0     1IPD - 0
TSCORE T0026 0  0.0     1LAP - 0
TSCORE T0026 0  0.0     1LFI - 0
TSCORE T0026 0  0.0     1LZ1 - 0
TSCORE T0026 0  0.0     1MBA - 0
TSCORE T0026 0  0.0     1MBC - 0
TSCORE T0026 0  0.0     1NSB A 0
TSCORE T0026 0  0.0     1OVA A 0
TSCORE T0026 0  0.0     1PAZ - 0
TSCORE T0026 0  0.0     1PHH - 0
TSCORE T0026 0  0.0     1PII - 0
TSCORE T0026 0  0.0     1PYP - 0
TSCORE T0026 0  0.0     1R69 - 0
TSCORE T0026 0  0.0     1RHD - 0
TSCORE T0026 0  0.0     1RNB A 0
TSCORE T0026 0  0.0     1RNH - 0
TSCORE T0026 0  0.0     1RVE A 0
TSCORE T0026 0  0.0     1SGT - 0
TSCORE T0026 0  0.0     1SNC - 0
TSCORE T0026 0  0.0     1TRB - 0
TSCORE T0026 0  0.05    1UBQ - 0
TSCORE T0026 0  0.0     1VSG A 0
TSCORE T0026 0  0.0     1WSY A 0
TSCORE T0026 0  0.0     1WSY B 0
TSCORE T0026 0  0.0     2ALP - 0
TSCORE T0026 0  0.0     2AZA A 0
TSCORE T0026 0  0.0     2CA2 - 0
TSCORE T0026 0  0.0     2CNA - 0
TSCORE T0026 0  0.0     2CPK E 0
TSCORE T0026 0  0.0     2CPP - 0
TSCORE T0026 0  0.0     2CYP - 0
TSCORE T0026 0  0.0     2ER7 E 0
TSCORE T0026 0  0.0     2FB4 H 0
TSCORE T0026 0  0.0     2FCR - 0
TSCORE T0026 0  0.0     2FX2 - 0
TSCORE T0026 0  0.0     2GBP - 0
TSCORE T0026 0  0.0     2GCR - 0
TSCORE T0026 0  0.0     2GLS A 0
TSCORE T0026 0  0.0     2LH3 - 0
TSCORE T0026 0  0.0     2LIV - 0
TSCORE T0026 0  0.0     2PCY - 0
TSCORE T0026 0  0.0     2PSG - 0
TSCORE T0026 0  0.0     2REB - 0
TSCORE T0026 0  0.0     2SCP A 0
TSCORE T0026 0  0.0     2SGA - 0
TSCORE T0026 0  0.0     2TRX A 0
TSCORE T0026 0  0.0     2TS1 - 0
TSCORE T0026 0  0.0     2TSC A 0
TSCORE T0026 0  0.0     2YHX - 0
TSCORE T0026 0  0.0     3ADK - 0
TSCORE T0026 0  0.0     3BCL - 0
TSCORE T0026 0  0.0     3BLM - 0
TSCORE T0026 0  0.0     3CD4 - 0
TSCORE T0026 0  0.0     3CHY - 0
TSCORE T0026 0  0.0     3COX - 0
TSCORE T0026 0  0.0     3DFR - 0
TSCORE T0026 0  0.0     3GAP A 0
TSCORE T0026 0  0.0     3GLY - 0
TSCORE T0026 0  0.0     3GRS - 0
TSCORE T0026 0  0.0     3HLA A 0
TSCORE T0026 0  0.0     3LZM - 0
TSCORE T0026 0  0.0     3PGK - 0
TSCORE T0026 0  0.0     3PGM - 0
TSCORE T0026 0  0.0     3TIM A 0
TSCORE T0026 0  0.0     4CLA - 0
TSCORE T0026 0  0.0     4CPV - 0
TSCORE T0026 0  0.0     4DFR A 0
TSCORE T0026 0  0.0     4ENL - 0
TSCORE T0026 0  0.0     4FGF - 0
TSCORE T0026 0  0.0     4FXN - 0
TSCORE T0026 0  0.15    4ICB - 0
TSCORE T0026 0  0.0     4ICD - 0
TSCORE T0026 0  0.0     4MDH A 0
TSCORE T0026 0  0.0     4PFK - 0
TSCORE T0026 0  0.0     4PTP - 0
TSCORE T0026 0  0.0     5CPA - 0
TSCORE T0026 0  0.0     5P21 - 0
TSCORE T0026 0  0.0     5RUB A 0
TSCORE T0026 0  0.0     6LDH - 0
TSCORE T0026 0  0.0     6TMN E 0
TSCORE T0026 0  0.0     6XIA - 0
TSCORE T0026 0  0.0     7AAT A 0
TSCORE T0026 0  0.0     7API A 0
TSCORE T0026 0  0.0     7RSA - 0
TSCORE T0026 0  0.0     8ABP - 0
TSCORE T0026 0  0.0     8ADH - 0
TSCORE T0026 0  0.0     8ATC A 0
TSCORE T0026 0  0.0     8CAT A 0
TSCORE T0026 0  0.0     8DFR - 0
TSCORE T0026 0  0.0     9PAP - 0
TSCORE T0026 0  0.0     9RNT - 0
TSCORE T0026 0  0.0     9WGA A 0
TSCORE T0026 0  0.0     1BBP A 0
TSCORE T0026 0  0.0     1BMV 1 0
TSCORE T0026 0  0.0     1BMV 2 0
TSCORE T0026 0  0.0     1BOV A 0
TSCORE T0026 0  0.0     1CC5 - 0
TSCORE T0026 0  0.0     1CD8 - 0
TSCORE T0026 0  0.0     1COB A 0
TSCORE T0026 0  0.0     1CRN - 0
TSCORE T0026 0  0.0     1CSE I 0
TSCORE T0026 0  0.0     1FDX - 0
TSCORE T0026 0  0.30    1FIA A 0
TSCORE T0026 0  0.0     1FXD - 0
TSCORE T0026 0  0.0     1FXI A 0
TSCORE T0026 0  0.0     1HGE B 0
TSCORE T0026 0  0.01    1HOE - 0
TSCORE T0026 0  0.0     1HRH A 0
TSCORE T0026 0  0.0     1ITH A 0
TSCORE T0026 0  0.0     1LE2 - 0
TSCORE T0026 0  0.30    1LMB 3 0
TSCORE T0026 0  0.0     1MSB A 0
TSCORE T0026 0  0.0     1PI2 - 0
TSCORE T0026 0  0.0     1PRC C 0
TSCORE T0026 0  0.0     1PRC H 0
TSCORE T0026 0  0.0     1PRC L 0
TSCORE T0026 0  0.0     1PRC M 0
TSCORE T0026 0  0.0     1RBP - 0
TSCORE T0026 0  0.0     1ROP A 0
TSCORE T0026 0  0.0     1TGS I 0
TSCORE T0026 0  0.0     1THB A 0
TSCORE T0026 0  0.0     1TNF A 0
TSCORE T0026 0  0.0     1TPK A 0
TSCORE T0026 0  0.08    1UTG - 0
TSCORE T0026 0  0.0     1YCC - 0
TSCORE T0026 0  0.0     256B A 0
TSCORE T0026 0  0.0     2CCY A 0
TSCORE T0026 0  0.0     2CDV - 0
TSCORE T0026 0  0.0     2CI2 I 0
TSCORE T0026 0  0.0     2CY3 - 0
TSCORE T0026 0  0.0     2FXB - 0
TSCORE T0026 0  0.0     2HIP A 0
TSCORE T0026 0  0.0     2HMZ A 0
TSCORE T0026 0  0.0     2LHB - 0
TSCORE T0026 0  0.0     2LTN A 0
TSCORE T0026 0  0.0     2MEV 1 0
TSCORE T0026 0  0.0     2MEV 2 0
TSCORE T0026 0  0.0     2MEV 3 0
TSCORE T0026 0  0.01    2OVO - 0
TSCORE T0026 0  0.0     2PAB A 0
TSCORE T0026 0  0.0     2PLV 1 0
TSCORE T0026 0  0.0     2PLV 2 0
TSCORE T0026 0  0.0     2PLV 3 0
TSCORE T0026 0  0.0     2POR - 0
TSCORE T0026 0  0.0     2RHE - 0
TSCORE T0026 0  0.0     2RSP A 0
TSCORE T0026 0  0.0     2SAR A 0
TSCORE T0026 0  0.0     2SIC I 0
TSCORE T0026 0  0.0     2SN3 - 0
TSCORE T0026 0  0.0     2SNV - 0
TSCORE T0026 0  0.0     2STV - 0
TSCORE T0026 0  0.0     2TBV A 0
TSCORE T0026 0  0.0     2TMV P 0
TSCORE T0026 0  0.0     2WRP R 0
TSCORE T0026 0  0.0     3B5C - 0
TSCORE T0026 0  0.0     3EBX - 0
TSCORE T0026 0  0.0     3HLA B 0
TSCORE T0026 0  0.0     3SDH A 0
TSCORE T0026 0  0.0     3SDP A 0
TSCORE T0026 0  0.0     3SGB I 0
TSCORE T0026 0  0.0     451C - 0
TSCORE T0026 0  0.0     4BP2 - 0
TSCORE T0026 0  0.0     4SBV A 0
TSCORE T0026 0  0.0     5FD1 - 0
TSCORE T0026 0  0.0     5HVP A 0
TSCORE T0026 0  0.0     5PTI - 0
TSCORE T0026 0  0.0     5RXN - 0
TSCORE T0026 0  0.0     8ATC B 0
REMARK ===================================================================
TALIGN T0026 0       9   24   1FIA A 0      27   42    1.0   1 
TALIGN T0026 0      25   44   1FIA A 0      50   69    1.0   1 
TALIGN T0026 0      46   53   1FIA A 0      74   81    1.0   1 
TALIGN T0026 0      65   74   1FIA A 0      85   94    1.0   1 
REMARK ===================================================================
TALIGN T0026 0       1   11   1UTG - 0       4   14    1.0   1 
TALIGN T0026 0      12   21   1UTG - 0      18   27    1.0   1 
TALIGN T0026 0      25   40   1UTG - 0      32   47    1.0   1 
TALIGN T0026 0      43   58   1UTG - 0      50   65    1.0   1 
REMARK ===================================================================
TALIGN T0026 0       8   20   1HDD D 0      10   22    1.0   1 
TALIGN T0026 0      23   33   1HDD D 0      28   38    1.0   1 
TALIGN T0026 0      43   59   1HDD D 0      42   58    1.0   1 
REMARK ===================================================================
TALIGN T0026 0       5   19   1LMB 3 0       9   23    1.0   1 
TALIGN T0026 0      20   26   1LMB 3 0      33   39    1.0   1 
TALIGN T0026 0      27   34   1LMB 3 0      44   51    1.0   1 
TALIGN T0026 0      45   53   1LMB 3 0      61   69    1.0   1 
TALIGN T0026 0      58   71   1LMB 3 0      79   92    1.0   1 
REMARK ===================================================================
TALIGN T0026 0       3    9   1CTF - 0      54   60    1.0   1 
TALIGN T0026 0      10   23   1CTF - 0      64   77    1.0   1 
TALIGN T0026 0      25   34   1CTF - 0      79   88    1.0   1 
TALIGN T0026 0      35   41   1CTF - 0      92   98    1.0   1 
TALIGN T0026 0      42   56   1CTF - 0      99  113    1.0   1 
TALIGN T0026 0      64   68   1CTF - 0     116  120    1.0   1 
REMARK ===================================================================
TALIGN T0026 0      44   49   2OVO - 0      21   26    1.0   1 
TALIGN T0026 0      51   54   2OVO - 0      29   32    1.0   1 
TALIGN T0026 0      62   73   2OVO - 0      33   44    1.0   1 
TALIGN T0026 0      74   79   2OVO - 0      49   54    1.0   1 
REMARK ===================================================================
TALIGN T0026 0      16   22   1UBQ - 0       1    7    1.0   1 
TALIGN T0026 0      23   30   1UBQ - 0      10   17    1.0   1 
TALIGN T0026 0      35   46   1UBQ - 0      23   34    1.0   1 
TALIGN T0026 0      48   53   1UBQ - 0      40   45    1.0   1 
TALIGN T0026 0      54   56   1UBQ - 0      48   50    1.0   1 
TALIGN T0026 0      63   66   1UBQ - 0      56   59    1.0   1 
TALIGN T0026 0      70   78   1UBQ - 0      64   72    1.0   1 
REMARK ===================================================================
TALIGN T0026 0       7   20   4ICB - 0       2   15    1.0   1 
TALIGN T0026 0      23   23   4ICB - 0      23   23    1.0   1 
TALIGN T0026 0      26   38   4ICB - 0      24   36    1.0   1 
TALIGN T0026 0      39   42   4ICB - 0      37   40    1.0   1 
TALIGN T0026 0      45   54   4ICB - 0      45   54    1.0   1 
TALIGN T0026 0      56   56   4ICB - 0      61   61    1.0   1 
TALIGN T0026 0      58   71   4ICB - 0      62   75    1.0   1 
REMARK ===================================================================
TALIGN T0026 0      17   23   1HOE - 0      11   17    1.0   1 
TALIGN T0026 0      25   32   1HOE - 0      19   26    1.0   1 
TALIGN T0026 0      37   44   1HOE - 0      30   37    1.0   1 
TALIGN T0026 0      48   57   1HOE - 0      40   49    1.0   1 
TALIGN T0026 0      60   66   1HOE - 0      51   57    1.0   1 
TALIGN T0026 0      69   78   1HOE - 0      64   73    1.0   1 
REMARK ===================================================================

