


PFRMAT FRV1
REMARK ========================================================================
REMARK Threading results for the target T22: the results from different
REMARK methods were combined into one prediction. The methods used were:
REMARK
REMARK Thread: threading using three term: fraction surface area, distance 
REMARK         dependent pairwise potential, phi-psi potential. 
REMARK         Frozen approximation, global alignment.
REMARK 
REMARK Sequence: pairwise, weighted by secondary structure prediction, 
REMARK           global sequence alignment
REMARK
REMARK Profile: the sequence was aligned to a database of sequence profiles
REMARK          Local alignment
REMARK
REMARK ========================================================================
AUTHOR 7880-3166-2953 N. Alexandrov, M. Bass, V. Solovyev, R.Luethy
AUTHOR 7880-3166-2953 Amgen, Inc.
REMARK ========================================================================
REMARK >t0030; Domain 1 of protein g3 from filamentous phage fd, 66a.a.
SEQRES T0030 ETVESCLAKPHTENSFTNVWKDDKTLDRYANYEGCLWNATGVVVCTGDET 
SEQRES T0030 QCYGTWVPIGLAIPEN
REMARK ========================================================================
TSCORE T0030 0   0.7  NONE - 0
TSCORE T0030  0  0.3  2ER7 E 0
TSCORE T0030  0  0.0  1GHR - 0
TSCORE T0030  0  0.0  1NTR - 0
TSCORE T0030  0  0.0  131L - 0
TSCORE T0030  0  0.0  153L - 0
TSCORE T0030  0  0.0  193L - 0
TSCORE T0030  0  0.0  1AAB - 0
TSCORE T0030  0  0.0  1AAC - 0
TSCORE T0030  0  0.0  1AAF - 0
TSCORE T0030  0  0.0  1AAK - 0
TSCORE T0030  0  0.0  1ABA - 0
TSCORE T0030  0  0.0  1ABO A 0
TSCORE T0030  0  0.0  1ABR A 0
TSCORE T0030  0  0.0  1ABR B 0
TSCORE T0030  0  0.0  1ACK - 0
TSCORE T0030  0  0.0  1ACP - 0
TSCORE T0030  0  0.0  1ADE A 0
TSCORE T0030  0  0.0  1ADM A 0
TSCORE T0030  0  0.0  1ADR - 0
TSCORE T0030  0  0.0  1ADT - 0
TSCORE T0030  0  0.0  1AEP - 0
TSCORE T0030  0  0.0  1AER A 0
TSCORE T0030  0  0.0  1AFB 1 0
TSCORE T0030  0  0.0  1AFP - 0
TSCORE T0030  0  0.0  1ALL A 0
TSCORE T0030  0  0.0  1AMG - 0
TSCORE T0030  0  0.0  1AML - 0
TSCORE T0030  0  0.0  1AMP - 0
TSCORE T0030  0  0.0  1AMY - 0
TSCORE T0030  0  0.0  1ANG - 0
TSCORE T0030  0  0.0  1ANT I 0
TSCORE T0030  0  0.0  1AOR A 0
TSCORE T0030  0  0.0  1AOZ A 0
TSCORE T0030  0  0.0  1APA - 0
TSCORE T0030  0  0.0  1APF - 0
TSCORE T0030  0  0.0  1APS - 0
TSCORE T0030  0  0.0  1ARB - 0
TSCORE T0030  0  0.0  1ARS - 0
TSCORE T0030  0  0.0  1ARV - 0
TSCORE T0030  0  0.0  1ASH - 0
TSCORE T0030  0  0.0  1ASZ A 0
TSCORE T0030  0  0.0  1ATE - 0
TSCORE T0030  0  0.0  1ATL A 0
TSCORE T0030  0  0.0  1ATP E 0
TSCORE T0030  0  0.0  1ATY - 0
TSCORE T0030  0  0.0  1AVD A 0
TSCORE T0030  0  0.0  1AYA A 0
TSCORE T0030  0  0.0  1BAM - 0
TSCORE T0030  0  0.0  1BBH A 0
TSCORE T0030  0  0.0  1BBL - 0
TSCORE T0030  0  0.0  1BBO - 0
TSCORE T0030  0  0.0  1BBP A 0
TSCORE T0030  0  0.0  1BBR H 0
TSCORE T0030  0  0.0  1BBT 1 0
TSCORE T0030  0  0.0  1BBT 2 0
TSCORE T0030  0  0.0  1BBT 3 0
TSCORE T0030  0  0.0  1BCF A 0
TSCORE T0030  0  0.0  1BCO - 0
TSCORE T0030  0  0.0  1BDM B 0
TSCORE T0030  0  0.0  1BEC - 0
TSCORE T0030  0  0.0  1BER A 0
TSCORE T0030  0  0.0  1BFM A 0
TSCORE T0030  0  0.0  1BGC - 0
TSCORE T0030  0  0.0  1BGH - 0
TSCORE T0030  0  0.0  1BGL A 0
TSCORE T0030  0  0.0  1BGW - 0
TSCORE T0030  0  0.0  1BIA - 0
TSCORE T0030  0  0.0  1BIP - 0
TSCORE T0030  0  0.0  1BMT A 0
TSCORE T0030  0  0.0  1BN2 1 0
TSCORE T0030  0  0.0  1BNB - 0
TSCORE T0030  0  0.0  1BNC B 0
TSCORE T0030  0  0.0  1BND A 0
TSCORE T0030  0  0.0  1BNH - 0
TSCORE T0030  0  0.0  1BOV A 0
TSCORE T0030  0  0.0  1BP2 - 0
TSCORE T0030  0  0.0  1BPB - 0
TSCORE T0030  0  0.0  1BRI C 0
TSCORE T0030  0  0.0  1BRL A 0
TSCORE T0030  0  0.0  1BRL B 0
TSCORE T0030  0  0.0  1BRS D 0
TSCORE T0030  0  0.0  1BTL - 0
TSCORE T0030  0  0.0  1BTN - 0
TSCORE T0030  0  0.0  1BUC A 0
TSCORE T0030  0  0.0  1BUN B 0
TSCORE T0030  0  0.0  1BVP 1 0
TSCORE T0030  0  0.0  1BW4 - 0
TSCORE T0030  0  0.0  1BYB - 0
TSCORE T0030  0  0.0  1C53 - 0
TSCORE T0030  0  0.0  1CAU A 0
TSCORE T0030  0  0.0  1CAU B 0
TSCORE T0030  0  0.0  1CBG - 0
TSCORE T0030  0  0.0  1CBN - 0
TSCORE T0030  0  0.0  1CBP - 0
TSCORE T0030  0  0.0  1CC5 - 0
TSCORE T0030  0  0.0  1CCR - 0
TSCORE T0030  0  0.0  1CD8 - 0
TSCORE T0030  0  0.0  1CDO A 0
TSCORE T0030  0  0.0  1CEA A 0
TSCORE T0030  0  0.0  1CEL A 0
TSCORE T0030  0  0.0  1CEO - 0
TSCORE T0030  0  0.0  1CEW I 0
TSCORE T0030  0  0.0  1CFB - 0
TSCORE T0030  0  0.0  1CGO - 0
TSCORE T0030  0  0.0  1CHC - 0
TSCORE T0030  0  0.0  1CHD - 0
TSCORE T0030  0  0.0  1CHK A 0
TSCORE T0030  0  0.0  1CHL - 0
TSCORE T0030  0  0.0  1CHM A 0
TSCORE T0030  0  0.0  1CID - 0
TSCORE T0030  0  0.0  1CIS - 0
TSCORE T0030  0  0.0  1CKA A 0
TSCORE T0030  0  0.0  1CKI A 0
TSCORE T0030  0  0.0  1CKS B 0
TSCORE T0030  0  0.0  1CLC - 0
TSCORE T0030  0  0.0  1CLH - 0
TSCORE T0030  0  0.0  1CLX A 0
TSCORE T0030  0  0.0  1CMB A 0
TSCORE T0030  0  0.0  1CNS A 0
TSCORE T0030  0  0.0  1COL A 0
TSCORE T0030  0  0.0  1COO - 0
TSCORE T0030  0  0.0  1COP D 0
TSCORE T0030  0  0.0  1CPC A 0
TSCORE T0030  0  0.0  1CPC B 0
TSCORE T0030  0  0.0  1CPT - 0
TSCORE T0030  0  0.0  1CPY - 0
TSCORE T0030  0  0.0  1CRB - 0
TSCORE T0030  0  0.0  1CRL - 0
TSCORE T0030  0  0.0  1CSE E 0
TSCORE T0030  0  0.0  1CSE I 0
TSCORE T0030  0  0.0  1CSH - 0
TSCORE T0030  0  0.0  1CSM A 0
TSCORE T0030  0  0.0  1CTF - 0
TSCORE T0030  0  0.0  1CTJ - 0
TSCORE T0030  0  0.0  1CTL - 0
TSCORE T0030  0  0.0  1CTM - 0
TSCORE T0030  0  0.0  1CTN - 0
TSCORE T0030  0  0.0  1CTT - 0
TSCORE T0030  0  0.0  1CUS - 0
TSCORE T0030  0  0.0  1CXC - 0
TSCORE T0030  0  0.0  1CYG - 0
TSCORE T0030  0  0.0  1CYU - 0
TSCORE T0030  0  0.0  1CYX - 0
TSCORE T0030  0  0.0  1D66 A 0
TSCORE T0030  0  0.0  1DAA A 0
TSCORE T0030  0  0.0  1DAR - 0
TSCORE T0030  0  0.0  1DCH A 0
TSCORE T0030  0  0.0  1DCT A 0
TSCORE T0030  0  0.0  1DDT - 0
TSCORE T0030  0  0.0  1DEA A 0
TSCORE T0030  0  0.0  1DEC - 0
TSCORE T0030  0  0.0  1DHR - 0
TSCORE T0030  0  0.0  1DHX - 0
TSCORE T0030  0  0.0  1DIH - 0
TSCORE T0030  0  0.0  1DIK - 0
TSCORE T0030  0  0.0  1DLC - 0
TSCORE T0030  0  0.0  1DLH A 0
TSCORE T0030  0  0.0  1DLH B 0
TSCORE T0030  0  0.0  1DMD - 0
TSCORE T0030  0  0.0  1DPB - 0
TSCORE T0030  0  0.0  1DPG A 0
TSCORE T0030  0  0.0  1DPP A 0
TSCORE T0030  0  0.0  1DSB A 0
TSCORE T0030  0  0.0  1DTR - 0
TSCORE T0030  0  0.0  1DTS - 0
TSCORE T0030  0  0.0  1DTX - 0
TSCORE T0030  0  0.0  1DUP A 0
TSCORE T0030  0  0.0  1DVR A 0
TSCORE T0030  0  0.0  1DYN A 0
TSCORE T0030  0  0.0  1DYR - 0
TSCORE T0030  0  0.0  1EBD C 0
TSCORE T0030  0  0.0  1ECA - 0
TSCORE T0030  0  0.0  1ECI B 0
TSCORE T0030  0  0.0  1ECL - 0
TSCORE T0030  0  0.0  1ECM A 0
TSCORE T0030  0  0.0  1ECP A 0
TSCORE T0030  0  0.0  1EDE - 0
TSCORE T0030  0  0.0  1EDT - 0
TSCORE T0030  0  0.0  1EFT - 0
TSCORE T0030  0  0.0  1EGR - 0
TSCORE T0030  0  0.0  1EHS - 0
TSCORE T0030  0  0.0  1EIT - 0
TSCORE T0030  0  0.0  1ENG - 0
TSCORE T0030  0  0.0  1ENY - 0
TSCORE T0030  0  0.0  1EPA B 0
TSCORE T0030  0  0.0  1EPS - 0
TSCORE T0030  0  0.0  1ERH - 0
TSCORE T0030  0  0.0  1ERI A 0
TSCORE T0030  0  0.0  1ERP - 0
TSCORE T0030  0  0.0  1ESC - 0
TSCORE T0030  0  0.0  1ESF B 0
TSCORE T0030  0  0.0  1ESL - 0
TSCORE T0030  0  0.0  1ETC - 0
TSCORE T0030  0  0.0  1EXH - 0
TSCORE T0030  0  0.0  1EZM - 0
TSCORE T0030  0  0.0  1FBA A 0
TSCORE T0030  0  0.0  1FBR - 0
TSCORE T0030  0  0.0  1FC2 C 0
TSCORE T0030  0  0.0  1FC2 D 0
TSCORE T0030  0  0.0  1FCD A 0
TSCORE T0030  0  0.0  1FCD C 0
TSCORE T0030  0  0.0  1FCT - 0
TSCORE T0030  0  0.0  1FIM - 0
TSCORE T0030  0  0.0  1FIP A 0
TSCORE T0030  0  0.0  1FIV A 0
TSCORE T0030  0  0.0  1FJL A 0
TSCORE T0030  0  0.0  1FJM A 0
TSCORE T0030  0  0.0  1FKJ - 0
TSCORE T0030  0  0.0  1FLP - 0
TSCORE T0030  0  0.0  1FNC - 0
TSCORE T0030  0  0.0  1FNF - 0
TSCORE T0030  0  0.0  1FOS E 0
TSCORE T0030  0  0.0  1FPS - 0
TSCORE T0030  0  0.0  1FRD - 0
TSCORE T0030  0  0.0  1FRP A 0
TSCORE T0030  0  0.0  1FRU A 0
TSCORE T0030  0  0.0  1FSC - 0
TSCORE T0030  0  0.0  1FTT - 0
TSCORE T0030  0  0.0  1FTZ - 0
TSCORE T0030  0  0.0  1FUJ A 0
TSCORE T0030  0  0.0  1FVL - 0
TSCORE T0030  0  0.0  1FWP - 0
TSCORE T0030  0  0.0  1GAD O 0
TSCORE T0030  0  0.0  1GAL - 0
TSCORE T0030  0  0.0  1GAR A 0
TSCORE T0030  0  0.0  1GAT A 0
TSCORE T0030  0  0.0  1GCA - 0
TSCORE T0030  0  0.0  1GCB - 0
TSCORE T0030  0  0.0  1GDH A 0
TSCORE T0030  0  0.0  1GFD - 0
TSCORE T0030  0  0.0  1GGT A 0
TSCORE T0030  0  0.0  1GKY - 0
TSCORE T0030  0  0.0  1GLC G 0
TSCORE T0030  0  0.0  1GLN - 0
TSCORE T0030  0  0.0  1GLQ A 0
TSCORE T0030  0  0.0  1GMF A 0
TSCORE T0030  0  0.0  1GMP A 0
TSCORE T0030  0  0.0  1GOF - 0
TSCORE T0030  0  0.0  1GP1 A 0
TSCORE T0030  0  0.0  1GPB - 0
TSCORE T0030  0  0.0  1GPC - 0
TSCORE T0030  0  0.0  1GPH 1 0
TSCORE T0030  0  0.0  1GPM A 0
TSCORE T0030  0  0.0  1GPR - 0
TSCORE T0030  0  0.0  1GRJ - 0
TSCORE T0030  0  0.0  1GSA - 0
TSCORE T0030  0  0.0  1GSE A 0
TSCORE T0030  0  0.0  1GTQ A 0
TSCORE T0030  0  0.0  1GTR A 0
TSCORE T0030  0  0.0  1HAE - 0
TSCORE T0030  0  0.0  1HAN - 0
TSCORE T0030  0  0.0  1HAR - 0
TSCORE T0030  0  0.0  1HBQ - 0
TSCORE T0030  0  0.0  1HC4 - 0
TSCORE T0030  0  0.0  1HCE - 0
TSCORE T0030  0  0.0  1HCG A 0
TSCORE T0030  0  0.0  1HCG B 0
TSCORE T0030  0  0.0  1HCN A 0
TSCORE T0030  0  0.0  1HCN B 0
TSCORE T0030  0  0.0  1HCR A 0
TSCORE T0030  0  0.0  1HDC A 0
TSCORE T0030  0  0.0  1HFH - 0
TSCORE T0030  0  0.0  1HGE A 0
TSCORE T0030  0  0.0  1HIP - 0
TSCORE T0030  0  0.0  1HJR A 0
TSCORE T0030  0  0.0  1HLB - 0
TSCORE T0030  0  0.0  1HLP A 0
TSCORE T0030  0  0.0  1HMC B 0
TSCORE T0030  0  0.0  1HMP A 0
TSCORE T0030  0  0.0  1HMT - 0
TSCORE T0030  0  0.0  1HMY - 0
TSCORE T0030  0  0.0  1HNG A 0
TSCORE T0030  0  0.0  1HNR - 0
TSCORE T0030  0  0.0  1HOE - 0
TSCORE T0030  0  0.0  1HPH - 0
TSCORE T0030  0  0.0  1HPM - 0
TSCORE T0030  0  0.0  1HPT - 0
TSCORE T0030  0  0.0  1HQA A 0
TSCORE T0030  0  0.0  1HRH A 0
TSCORE T0030  0  0.0  1HRM - 0
TSCORE T0030  0  0.0  1HRZ A 0
TSCORE T0030  0  0.0  1HSL A 0
TSCORE T0030  0  0.0  1HST A 0
TSCORE T0030  0  0.0  1HTM D 0
TSCORE T0030  0  0.0  1HTP - 0
TSCORE T0030  0  0.0  1HUC B 0
TSCORE T0030  0  0.0  1HUE A 0
TSCORE T0030  0  0.0  1HUL A 0
TSCORE T0030  0  0.0  1HUW - 0
TSCORE T0030  0  0.0  1HVD - 0
TSCORE T0030  0  0.0  1HVK A 0
TSCORE T0030  0  0.0  1HXN - 0
TSCORE T0030  0  0.0  1HYH A 0
TSCORE T0030  0  0.0  1HYL A 0
TSCORE T0030  0  0.0  1HYP - 0
TSCORE T0030  0  0.0  1I1B - 0
TSCORE T0030  0  0.0  1IAE - 0
TSCORE T0030  0  0.0  1ICA - 0
TSCORE T0030  0  0.0  1ICE A 0
TSCORE T0030  0  0.0  1ICE B 0
TSCORE T0030  0  0.0  1IFA - 0
TSCORE T0030  0  0.0  1IFC - 0
TSCORE T0030  0  0.0  1IGD - 0
TSCORE T0030  0  0.0  1IGS - 0
TSCORE T0030  0  0.0  1IHW A 0
TSCORE T0030  0  0.0  1IKM - 0
TSCORE T0030  0  0.0  1ILK - 0
TSCORE T0030  0  0.0  1ILR 1 0
TSCORE T0030  0  0.0  1INP - 0
TSCORE T0030  0  0.0  1IRK - 0
TSCORE T0030  0  0.0  1IRL - 0
TSCORE T0030  0  0.0  1ISC A 0
TSCORE T0030  0  0.0  1ISU A 0
TSCORE T0030  0  0.0  1ITG - 0
TSCORE T0030  0  0.0  1ITH A 0
TSCORE T0030  0  0.0  1JAP A 0
TSCORE T0030  0  0.0  1JCV - 0
TSCORE T0030  0  0.0  1JEL P 0
TSCORE T0030  0  0.0  1KAN A 0
TSCORE T0030  0  0.0  1KIF A 0
TSCORE T0030  0  0.0  1KLN A 0
TSCORE T0030  0  0.0  1KNB - 0
TSCORE T0030  0  0.0  1KPB A 0
TSCORE T0030  0  0.0  1KPT A 0
TSCORE T0030  0  0.0  1LAC - 0
TSCORE T0030  0  0.0  1LAT A 0
TSCORE T0030  0  0.0  1LAU E 0
TSCORE T0030  0  0.0  1LBA - 0
TSCORE T0030  0  0.0  1LCP A 0
TSCORE T0030  0  0.0  1LCT - 0
TSCORE T0030  0  0.0  1LDL - 0
TSCORE T0030  0  0.0  1LEB - 0
TSCORE T0030  0  0.0  1LEN A 0
TSCORE T0030  0  0.0  1LEN B 0
TSCORE T0030  0  0.0  1LFA A 0
TSCORE T0030  0  0.0  1LFB - 0
TSCORE T0030  0  0.0  1LGR - 0
TSCORE T0030  0  0.0  1LIS - 0
TSCORE T0030  0  0.0  1LKI - 0
TSCORE T0030  0  0.0  1LKK A 0
TSCORE T0030  0  0.0  1LLO - 0
TSCORE T0030  0  0.0  1LMB 3 0
TSCORE T0030  0  0.0  1LMW B 0
TSCORE T0030  0  0.0  1LPB B 0
TSCORE T0030  0  0.0  1LPE - 0
TSCORE T0030  0  0.0  1LPT - 0
TSCORE T0030  0  0.0  1LTD A 0
TSCORE T0030  0  0.0  1LTS A 0
TSCORE T0030  0  0.0  1LTS C 0
TSCORE T0030  0  0.0  1LTS D 0
TSCORE T0030  0  0.0  1LXA - 0
TSCORE T0030  0  0.0  1LYB A 0
TSCORE T0030  0  0.0  1LYB B 0
TSCORE T0030  0  0.0  1LYL A 0
TSCORE T0030  0  0.0  1MAL - 0
TSCORE T0030  0  0.0  1MAT - 0
TSCORE T0030  0  0.0  1MDA H 0
TSCORE T0030  0  0.0  1MDC - 0
TSCORE T0030  0  0.0  1MDY A 0
TSCORE T0030  0  0.0  1MHC A 0
TSCORE T0030  0  0.0  1MHC B 0
TSCORE T0030  0  0.0  1MHL A 0
TSCORE T0030  0  0.0  1MHL C 0
TSCORE T0030  0  0.0  1MIN A 0
TSCORE T0030  0  0.0  1MIN B 0
TSCORE T0030  0  0.0  1MJC - 0
TSCORE T0030  0  0.0  1MKA A 0
TSCORE T0030  0  0.0  1MLA - 0
TSCORE T0030  0  0.0  1MLD A 0
TSCORE T0030  0  0.0  1MLI - 0
TSCORE T0030  0  0.0  1MML - 0
TSCORE T0030  0  0.0  1MMO B 0
TSCORE T0030  0  0.0  1MMO D 0
TSCORE T0030  0  0.0  1MMO G 0
TSCORE T0030  0  0.0  1MOL A 0
TSCORE T0030  0  0.0  1MPP - 0
TSCORE T0030  0  0.0  1MRJ - 0
TSCORE T0030  0  0.0  1MSA A 0
TSCORE T0030  0  0.0  1MSC - 0
TSCORE T0030  0  0.0  1MSE C 0
TSCORE T0030  0  0.0  1MTX - 0
TSCORE T0030  0  0.0  1MUC A 0
TSCORE T0030  0  0.0  1MUP - 0
TSCORE T0030  0  0.0  1MUT - 0
TSCORE T0030  0  0.0  1MXA - 0
TSCORE T0030  0  0.0  1MYL B 0
TSCORE T0030  0  0.0  1MYS A 0
TSCORE T0030  0  0.0  1MYS B 0
TSCORE T0030  0  0.0  1NAL 1 0
TSCORE T0030  0  0.0  1NAR - 0
TSCORE T0030  0  0.0  1NBA A 0
TSCORE T0030  0  0.0  1NCF A 0
TSCORE T0030  0  0.0  1NCH A 0
TSCORE T0030  0  0.0  1NDH - 0
TSCORE T0030  0  0.0  1NER - 0
TSCORE T0030  0  0.0  1NFP - 0
TSCORE T0030  0  0.0  1NHK L 0
TSCORE T0030  0  0.0  1NHN - 0
TSCORE T0030  0  0.0  1NHP - 0
TSCORE T0030  0  0.0  1NIF - 0
TSCORE T0030  0  0.0  1NIP A 0
TSCORE T0030  0  0.0  1NNC - 0
TSCORE T0030  0  0.0  1NRC A 0
TSCORE T0030  0  0.0  1NSC A 0
TSCORE T0030  0  0.0  1OAC A 0
TSCORE T0030  0  0.0  1OAV - 0
TSCORE T0030  0  0.0  1OCT C 0
TSCORE T0030  0  0.0  1OEL A 0
TSCORE T0030  0  0.0  1OMP - 0
TSCORE T0030  0  0.0  1ONC - 0
TSCORE T0030  0  0.0  1ORD A 0
TSCORE T0030  0  0.0  1ORO B 0
TSCORE T0030  0  0.0  1OTF A 0
TSCORE T0030  0  0.0  1OTG A 0
TSCORE T0030  0  0.0  1OVA A 0
TSCORE T0030  0  0.0  1OXA - 0
TSCORE T0030  0  0.0  1OXY - 0
TSCORE T0030  0  0.0  1OYC - 0
TSCORE T0030  0  0.0  1PAZ - 0
TSCORE T0030  0  0.0  1PBA - 0
TSCORE T0030  0  0.0  1PBE - 0
TSCORE T0030  0  0.0  1PBG A 0
TSCORE T0030  0  0.0  1PBN - 0
TSCORE T0030  0  0.0  1PBX A 0
TSCORE T0030  0  0.0  1PBX B 0
TSCORE T0030  0  0.0  1PCL - 0
TSCORE T0030  0  0.0  1PCO - 0
TSCORE T0030  0  0.0  1PCR H 0
TSCORE T0030  0  0.0  1PDA - 0
TSCORE T0030  0  0.0  1PDC - 0
TSCORE T0030  0  0.0  1PDG A 0
TSCORE T0030  0  0.0  1PDN C 0
TSCORE T0030  0  0.0  1PEA - 0
TSCORE T0030  0  0.0  1PFK A 0
TSCORE T0030  0  0.0  1PGS - 0
TSCORE T0030  0  0.0  1PHG - 0
TSCORE T0030  0  0.0  1PHR - 0
TSCORE T0030  0  0.0  1PHT - 0
TSCORE T0030  0  0.0  1PI2 - 0
TSCORE T0030  0  0.0  1PII - 0
TSCORE T0030  0  0.0  1PKM - 0
TSCORE T0030  0  0.0  1PKP - 0
TSCORE T0030  0  0.0  1PLF B 0
TSCORE T0030  0  0.0  1PLQ - 0
TSCORE T0030  0  0.0  1PLS - 0
TSCORE T0030  0  0.0  1PMA 1 0
TSCORE T0030  0  0.0  1PMA A 0
TSCORE T0030  0  0.0  1PML A 0
TSCORE T0030  0  0.0  1PNE - 0
TSCORE T0030  0  0.0  1PNH - 0
TSCORE T0030  0  0.0  1PNK A 0
TSCORE T0030  0  0.0  1PNK B 0
TSCORE T0030  0  0.0  1PNR A 0
TSCORE T0030  0  0.0  1POC - 0
TSCORE T0030  0  0.0  1POX A 0
TSCORE T0030  0  0.0  1POY 1 0
TSCORE T0030  0  0.0  1PRC C 0
TSCORE T0030  0  0.0  1PRC L 0
TSCORE T0030  0  0.0  1PRC M 0
TSCORE T0030  0  0.0  1PRN - 0
TSCORE T0030  0  0.0  1PRR - 0
TSCORE T0030  0  0.0  1PRT A 0
TSCORE T0030  0  0.0  1PRT B 0
TSCORE T0030  0  0.0  1PRT D 0
TSCORE T0030  0  0.0  1PRT F 0
TSCORE T0030  0  0.0  1PSD A 0
TSCORE T0030  0  0.0  1PSF - 0
TSCORE T0030  0  0.0  1PTA - 0
TSCORE T0030  0  0.0  1PTD - 0
TSCORE T0030  0  0.0  1PTF - 0
TSCORE T0030  0  0.0  1PTH - 0
TSCORE T0030  0  0.0  1PTQ - 0
TSCORE T0030  0  0.0  1PTX - 0
TSCORE T0030  0  0.0  1PUT - 0
TSCORE T0030  0  0.0  1PVC 1 0
TSCORE T0030  0  0.0  1PVC 2 0
TSCORE T0030  0  0.0  1PVC 4 0
TSCORE T0030  0  0.0  1PVD A 0
TSCORE T0030  0  0.0  1PVU A 0
TSCORE T0030  0  0.0  1PXT B 0
TSCORE T0030  0  0.0  1PYA A 0
TSCORE T0030  0  0.0  1PYA B 0
TSCORE T0030  0  0.0  1PYI A 0
TSCORE T0030  0  0.0  1PYP - 0
TSCORE T0030  0  0.0  1QOR A 0
TSCORE T0030  0  0.0  1QPG - 0
TSCORE T0030  0  0.0  1QUK - 0
TSCORE T0030  0  0.0  1R69 - 0
TSCORE T0030  0  0.0  1RCB - 0
TSCORE T0030  0  0.0  1RCF - 0
TSCORE T0030  0  0.0  1RCI - 0
TSCORE T0030  0  0.0  1RCP A 0
TSCORE T0030  0  0.0  1REC - 0
TSCORE T0030  0  0.0  1REG X 0
TSCORE T0030  0  0.0  1RET - 0
TSCORE T0030  0  0.0  1RFA - 0
TSCORE T0030  0  0.0  1RFB A 0
TSCORE T0030  0  0.0  1RIB A 0
TSCORE T0030  0  0.0  1RIP - 0
TSCORE T0030  0  0.0  1RIS - 0
TSCORE T0030  0  0.0  1RPA - 0
TSCORE T0030  0  0.0  1RPO - 0
TSCORE T0030  0  0.0  1RRG A 0
TSCORE T0030  0  0.0  1RSY - 0
TSCORE T0030  0  0.0  1RTG - 0
TSCORE T0030  0  0.0  1RTN A 0
TSCORE T0030  0  0.0  1RTP 1 0
TSCORE T0030  0  0.0  1RVA A 0
TSCORE T0030  0  0.0  1SAC A 0
TSCORE T0030  0  0.0  1SAP - 0
TSCORE T0030  0  0.0  1SAT - 0
TSCORE T0030  0  0.0  1SBP - 0
TSCORE T0030  0  0.0  1SCH A 0
TSCORE T0030  0  0.0  1SCU A 0
TSCORE T0030  0  0.0  1SCU B 0
TSCORE T0030  0  0.0  1SE2 - 0
TSCORE T0030  0  0.0  1SES A 0
TSCORE T0030  0  0.0  1SLT B 0
TSCORE T0030  0  0.0  1SLU A 0
TSCORE T0030  0  0.0  1SMD - 0
TSCORE T0030  0  0.0  1SMN A 0
TSCORE T0030  0  0.0  1SMP I 0
TSCORE T0030  0  0.0  1SNC - 0
TSCORE T0030  0  0.0  1SPB P 0
TSCORE T0030  0  0.0  1SPF - 0
TSCORE T0030  0  0.0  1SRA - 0
TSCORE T0030  0  0.0  1SRI B 0
TSCORE T0030  0  0.0  1STD - 0
TSCORE T0030  0  0.0  1STU - 0
TSCORE T0030  0  0.0  1SVA 1 0
TSCORE T0030  0  0.0  1SVB - 0
TSCORE T0030  0  0.0  1SVC P 0
TSCORE T0030  0  0.0  1SVR - 0
TSCORE T0030  0  0.0  1SXL - 0
TSCORE T0030  0  0.0  1TAG - 0
TSCORE T0030  0  0.0  1TAH A 0
TSCORE T0030  0  0.0  1TAM - 0
TSCORE T0030  0  0.0  1TCA - 0
TSCORE T0030  0  0.0  1TCP - 0
TSCORE T0030  0  0.0  1TEN - 0
TSCORE T0030  0  0.0  1TFI - 0
TSCORE T0030  0  0.0  1TFS - 0
TSCORE T0030  0  0.0  1TGX A 0
TSCORE T0030  0  0.0  1THT A 0
TSCORE T0030  0  0.0  1THV - 0
TSCORE T0030  0  0.0  1THX - 0
TSCORE T0030  0  0.0  1TIB - 0
TSCORE T0030  0  0.0  1TIF - 0
TSCORE T0030  0  0.0  1TIG - 0
TSCORE T0030  0  0.0  1TIN - 0
TSCORE T0030  0  0.0  1TIU - 0
TSCORE T0030  0  0.0  1TIV - 0
TSCORE T0030  0  0.0  1TLF A 0
TSCORE T0030  0  0.0  1TLK - 0
TSCORE T0030  0  0.0  1TML - 0
TSCORE T0030  0  0.0  1TNF A 0
TSCORE T0030  0  0.0  1TNM - 0
TSCORE T0030  0  0.0  1TNR A 0
TSCORE T0030  0  0.0  1TNS - 0
TSCORE T0030  0  0.0  1TON - 0
TSCORE T0030  0  0.0  1TOP - 0
TSCORE T0030  0  0.0  1TPG - 0
TSCORE T0030  0  0.0  1TPL A 0
TSCORE T0030  0  0.0  1TPT - 0
TSCORE T0030  0  0.0  1TRB - 0
TSCORE T0030  0  0.0  1TRK A 0
TSCORE T0030  0  0.0  1TRR A 0
TSCORE T0030  0  0.0  1TRY - 0
TSCORE T0030  0  0.0  1TSP - 0
TSCORE T0030  0  0.0  1TSS A 0
TSCORE T0030  0  0.0  1TTB A 0
TSCORE T0030  0  0.0  1TUP B 0
TSCORE T0030  0  0.0  1TVT - 0
TSCORE T0030  0  0.0  1TYS - 0
TSCORE T0030  0  0.0  1UBI - 0
TSCORE T0030  0  0.0  1UBS A 0
TSCORE T0030  0  0.0  1UBS B 0
TSCORE T0030  0  0.0  1UDI I 0
TSCORE T0030  0  0.0  1UDP A 0
TSCORE T0030  0  0.0  1UKZ - 0
TSCORE T0030  0  0.0  1UTG - 0
TSCORE T0030  0  0.0  1VCA A 0
TSCORE T0030  0  0.0  1VCC - 0
TSCORE T0030  0  0.0  1VHH - 0
TSCORE T0030  0  0.0  1VHR A 0
TSCORE T0030  0  0.0  1VID - 0
TSCORE T0030  0  0.0  1VIH - 0
TSCORE T0030  0  0.0  1VIL - 0
TSCORE T0030  0  0.0  1VMO A 0
TSCORE T0030  0  0.0  1VSD - 0
TSCORE T0030  0  0.0  1VSG A 0
TSCORE T0030  0  0.0  1WAP A 0
TSCORE T0030  0  0.0  1WAS - 0
TSCORE T0030  0  0.0  1WBC - 0
TSCORE T0030  0  0.0  1WDC C 0
TSCORE T0030  0  0.0  1WHT A 0
TSCORE T0030  0  0.0  1WHT B 0
TSCORE T0030  0  0.0  1XAA - 0
TSCORE T0030  0  0.0  1XNB - 0
TSCORE T0030  0  0.0  1XXA A 0
TSCORE T0030  0  0.0  1XYZ A 0
TSCORE T0030  0  0.0  1YPT B 0
TSCORE T0030  0  0.0  1YRN A 0
TSCORE T0030  0  0.0  1YRN B 0
TSCORE T0030  0  0.0  1YSA D 0
TSCORE T0030  0  0.0  1YTB A 0
TSCORE T0030  0  0.0  1YTF B 0
TSCORE T0030  0  0.0  1YTF C 0
TSCORE T0030  0  0.0  1YTF D 0
TSCORE T0030  0  0.0  1YUA - 0
TSCORE T0030  0  0.0  1ZAA C 0
TSCORE T0030  0  0.0  1ZAQ - 0
TSCORE T0030  0  0.0  256B A 0
TSCORE T0030  0  0.0  2ABD - 0
TSCORE T0030  0  0.0  2ABK - 0
TSCORE T0030  0  0.0  2ACG - 0
TSCORE T0030  0  0.0  2ACH A 0
TSCORE T0030  0  0.0  2ACQ - 0
TSCORE T0030  0  0.0  2ALP - 0
TSCORE T0030  0  0.0  2AT2 A 0
TSCORE T0030  0  0.0  2AYH - 0
TSCORE T0030  0  0.0  2AZA A 0
TSCORE T0030  0  0.0  2BBK H 0
TSCORE T0030  0  0.0  2BBV C 0
TSCORE T0030  0  0.0  2BGU - 0
TSCORE T0030  0  0.0  2BLT A 0
TSCORE T0030  0  0.0  2BOP A 0
TSCORE T0030  0  0.0  2BPA 1 0
TSCORE T0030  0  0.0  2BPA 2 0
TSCORE T0030  0  0.0  2BRD - 0
TSCORE T0030  0  0.0  2BTF A 0
TSCORE T0030  0  0.0  2CAS - 0
TSCORE T0030  0  0.0  2CBA - 0
TSCORE T0030  0  0.0  2CBH - 0
TSCORE T0030  0  0.0  2CCY A 0
TSCORE T0030  0  0.0  2CDV - 0
TSCORE T0030  0  0.0  2CHS A 0
TSCORE T0030  0  0.0  2CPL - 0
TSCORE T0030  0  0.0  2CTC - 0
TSCORE T0030  0  0.0  2CTX - 0
TSCORE T0030  0  0.0  2CWG A 0
TSCORE T0030  0  0.0  2CY3 - 0
TSCORE T0030  0  0.0  2CYP - 0
TSCORE T0030  0  0.0  2DKB - 0
TSCORE T0030  0  0.0  2DLD A 0
TSCORE T0030  0  0.0  2DLN - 0
TSCORE T0030  0  0.0  2DNJ A 0
TSCORE T0030  0  0.0  2DRI - 0
TSCORE T0030  0  0.0  2DRP A 0
TSCORE T0030  0  0.0  2EBN - 0
TSCORE T0030  0  0.0  2END - 0
TSCORE T0030  0  0.0  2FAL - 0
TSCORE T0030  0  0.0  2FD2 - 0
TSCORE T0030  0  0.0  2FX2 - 0
TSCORE T0030  0  0.0  2FXB - 0
TSCORE T0030  0  0.0  2GDM - 0
TSCORE T0030  0  0.0  2GSQ - 0
TSCORE T0030  0  0.0  2GST A 0
TSCORE T0030  0  0.0  2HBG - 0
TSCORE T0030  0  0.0  2HFT - 0
TSCORE T0030  0  0.0  2HHM A 0
TSCORE T0030  0  0.0  2HIP A 0
TSCORE T0030  0  0.0  2HMZ A 0
TSCORE T0030  0  0.0  2HPD A 0
TSCORE T0030  0  0.0  2HPQ P 0
TSCORE T0030  0  0.0  2HSP - 0
TSCORE T0030  0  0.0  2HTS - 0
TSCORE T0030  0  0.0  2IFO - 0
TSCORE T0030  0  0.0  2ILA - 0
TSCORE T0030  0  0.0  2KAU A 0
TSCORE T0030  0  0.0  2KAU B 0
TSCORE T0030  0  0.0  2KAU C 0
TSCORE T0030  0  0.0  2LHB - 0
TSCORE T0030  0  0.0  2LIV - 0
TSCORE T0030  0  0.0  2MAD L 0
TSCORE T0030  0  0.0  2MCM - 0
TSCORE T0030  0  0.0  2MEV 1 0
TSCORE T0030  0  0.0  2MEV 2 0
TSCORE T0030  0  0.0  2MEV 3 0
TSCORE T0030  0  0.0  2MEV 4 0
TSCORE T0030  0  0.0  2MNR - 0
TSCORE T0030  0  0.0  2MTA C 0
TSCORE T0030  0  0.0  2NAC A 0
TSCORE T0030  0  0.0  2OLB A 0
TSCORE T0030  0  0.0  2OMF - 0
TSCORE T0030  0  0.0  2PCD A 0
TSCORE T0030  0  0.0  2PCD M 0
TSCORE T0030  0  0.0  2PEC - 0
TSCORE T0030  0  0.0  2PGD - 0
TSCORE T0030  0  0.0  2PHY - 0
TSCORE T0030  0  0.0  2PIA - 0
TSCORE T0030  0  0.0  2PII - 0
TSCORE T0030  0  0.0  2PLE A 0
TSCORE T0030  0  0.0  2PLH - 0
TSCORE T0030  0  0.0  2PNA - 0
TSCORE T0030  0  0.0  2POL A 0
TSCORE T0030  0  0.0  2POR - 0
TSCORE T0030  0  0.0  2PRD - 0
TSCORE T0030  0  0.0  2PRK - 0
TSCORE T0030  0  0.0  2PSP A 0
TSCORE T0030  0  0.0  2PTL - 0
TSCORE T0030  0  0.0  2REB - 0
TSCORE T0030  0  0.0  2RN2 - 0
TSCORE T0030  0  0.0  2RSL B 0
TSCORE T0030  0  0.0  2RSP A 0
TSCORE T0030  0  0.0  2SAS - 0
TSCORE T0030  0  0.0  2SBL B 0
TSCORE T0030  0  0.0  2SCP A 0
TSCORE T0030  0  0.0  2SGA - 0
TSCORE T0030  0  0.0  2SH1 - 0
TSCORE T0030  0  0.0  2SIL - 0
TSCORE T0030  0  0.0  2SN3 - 0
TSCORE T0030  0  0.0  2SNV - 0
TSCORE T0030  0  0.0  2SPC A 0
TSCORE T0030  0  0.0  2STV - 0
TSCORE T0030  0  0.0  2TBV A 0
TSCORE T0030  0  0.0  2TCT - 0
TSCORE T0030  0  0.0  2TGI - 0
TSCORE T0030  0  0.0  2TMD A 0
TSCORE T0030  0  0.0  2TMV P 0
TSCORE T0030  0  0.0  3AAH A 0
TSCORE T0030  0  0.0  3AAH B 0
TSCORE T0030  0  0.0  3B5C - 0
TSCORE T0030  0  0.0  3BCL - 0
TSCORE T0030  0  0.0  3BLM - 0
TSCORE T0030  0  0.0  3CBH - 0
TSCORE T0030  0  0.0  3CD4 - 0
TSCORE T0030  0  0.0  3CHY - 0
TSCORE T0030  0  0.0  3CLA - 0
TSCORE T0030  0  0.0  3COX - 0
TSCORE T0030  0  0.0  3DFR - 0
TSCORE T0030  0  0.0  3DPA - 0
TSCORE T0030  0  0.0  3EGF - 0
TSCORE T0030  0  0.0  3EST - 0
TSCORE T0030  0  0.0  3GLY - 0
TSCORE T0030  0  0.0  3GRS - 0
TSCORE T0030  0  0.0  3HHR C 0
TSCORE T0030  0  0.0  3LAD A 0
TSCORE T0030  0  0.0  3PGA 1 0
TSCORE T0030  0  0.0  3PGM - 0
TSCORE T0030  0  0.0  3PMG A 0
TSCORE T0030  0  0.0  3PTE - 0
TSCORE T0030  0  0.0  3RUB L 0
TSCORE T0030  0  0.0  3SDH A 0
TSCORE T0030  0  0.0  3SGB I 0
TSCORE T0030  0  0.0  3SIC I 0
TSCORE T0030  0  0.0  3TGL - 0
TSCORE T0030  0  0.0  451C - 0
TSCORE T0030  0  0.0  4CPA I 0
TSCORE T0030  0  0.0  4DFR A 0
TSCORE T0030  0  0.0  4ENL - 0
TSCORE T0030  0  0.0  4FGF - 0
TSCORE T0030  0  0.0  4FXN - 0
TSCORE T0030  0  0.0  4GCR - 0
TSCORE T0030  0  0.0  4HTC I 0
TSCORE T0030  0  0.0  4HTC L 0
TSCORE T0030  0  0.0  4ICB - 0
TSCORE T0030  0  0.0  4MT2 - 0
TSCORE T0030  0  0.0  4RHV 3 0
TSCORE T0030  0  0.0  4SBV A 0
TSCORE T0030  0  0.0  4SGB I 0
TSCORE T0030  0  0.0  4TS1 A 0
TSCORE T0030  0  0.0  4XIA A 0
TSCORE T0030  0  0.0  5P21 - 0
TSCORE T0030  0  0.0  5RUB A 0
TSCORE T0030  0  0.0  5RXN - 0
TSCORE T0030  0  0.0  5TIM A 0
TSCORE T0030  0  0.0  6FAB L 0
TSCORE T0030  0  0.0  6INS E 0
TSCORE T0030  0  0.0  6TAA - 0
TSCORE T0030  0  0.0  7ICD - 0
TSCORE T0030  0  0.0  7PCY - 0
TSCORE T0030  0  0.0  7PTI - 0
TSCORE T0030  0  0.0  7RSA - 0
TSCORE T0030  0  0.0  8ABP - 0
TSCORE T0030  0  0.0  8ACN - 0
TSCORE T0030  0  0.0  8ATC A 0
TSCORE T0030  0  0.0  8ATC B 0
TSCORE T0030  0  0.0  8CAT A 0
TSCORE T0030  0  0.0  8FAB B 0
TSCORE T0030  0  0.0  8TLN E 0
TSCORE T0030  0  0.0  9LDT A 0
TSCORE T0030  0  0.0  9PAP - 0
TSCORE T0030  0  0.0  9RNT - 0
REMARK =======================================================================
REMARK   PROFILESEARCH Bioccelerator $Revision: 4.11 $ $Date: 1996/08/22
REMARK   Profile : t0030.prf
REMARK   Database file   1 : ../knownstruct.seq
REMARK   Gap opening penalty   :   1.70
REMARK   Gap extension penalty :   0.20
REMARK           Name               ZScore Score Length   Documentation ..
REMARK PEP3_RABIT          +   6.37   6.30  387. ! P27822 rabbit pepsinogen iii precursor 
REMARK PEP2_MACFU          +   6.35   6.29  388. ! P27677 japanese macaque pepsinogen a-2
REMARK PEP1_MACFU          +   6.18   6.20  388. ! P03954 japanese macaque pepsinogen a-1
REMARK PEPA_MACMU          +   6.18   6.20  388. ! P11489 rhesus macaque pepsinogen a precursor 
REMARK PEPA_HUMAN          +   6.15   6.18  388. ! P00790 human pepsinogen a precursor 
REMARK GP:RNU35774_1       +   6.02   6.11  411. ! U35774 Rat cytosolic branch chain aminotransferase mRNA 
REMARK PEP4_MACFU          +   6.00   6.10  388. ! P27678 japanese macaque pepsinogen a-4 precursor
REMARK
REMARK                                            1234567890123456789012345 678901234567890123456789012 345  67890
REMARK t0030.pep      1                           ETVESCLAKPHTENSFTNVWKDDKT.LDRYANYEGCLWNATGVVVCTGDETQC.YGT..WVPIGLAIPEN
REMARK pep3_rabit   183                           GLAYPSISSSDATPVFDNMWNEGLVSEDLFSVYLSSDDESGSVVMFGGIDSSYYTGSLNWVPVS......
REMARK pep3_rabit   157 DTNQIFGLSESEPGSFLYYAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSEDLFSVYLSSDDESGSVVMFGGIDSSYYTGSLNWVPVSY.EGYWQITL
REMARK 2er7e.seq    101 VTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQK.TFFDNAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTS
REMARK                  678901234567890123456789012345678901234 56 7890123456789012345678901234567890145678901234567890
REMARK 
TALIGN   T0030  0    1   16   2ER7 E  0    122   136   1.0   1
TALIGN   T0030  0   18   25   2ER7 E  0    137   144   1.0   1
TALIGN   T0030  0   26   52   2ER7 E  0    146   174   1.0   1
TALIGN   T0030  0   53   55   2ER7 E  0    176   178   1.0   1
TALIGN   T0030  0   56   61   2ER7 E  0    181   185   1.0   1



