


PFRMAT FRV1
REMARK ========================================================================
AUTHOR Willie Taylor and Robin Munro,
AUTHOR Division of Mathematical Biology,
AUTHOR National Institute for Medical Research,
AUTHOR The Ridgeway, Mill Hill, London NW7 1AA, U.K.
AUTHOR w_taylor@nimr.mrc.ac.uk 
AUTHOR r-munro@nimr.mrc.ac.uk 
AUTHOR Tel. +44-181-959-3666 (ext.2298), FAX +44-181-913-8545
REMARK ========================================================================
REMARK Threading results for the target T0037, compared against a
REMARK Database containing 319 Structures (extended UCLA benchmark set).
REMARK 
REMARK ========================================================================
REMARK T0037 Calponin homology domain of beta-spectrin 
REMARK T0037 from human, 109a.a. 
REMARK T0037 Threading target T0037
SEQRES T0037 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDF
SEQRES T0037 DKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVT
SEQRES T0037 YYHYFSKMK
REMARK ========================================================================
REMARK
REMARK  
REMARK 
REMARK
REMARK       ......p- USER>>P1;AAC1_HUMAN:176
REMARK       ....p-b- USER>>P1;AACT_DICDI:169
REMARK       ..p-b--- USER>>t0037
REMARK       p-b----- USER>>P1;S32565:153
REMARK       b-p----- USER>>P1;DMD_HUMAN:166
REMARK       ..b----- USER>>P1;GELA_DICDI:156
REMARK  450
REMARK       -------- USER>>P1;HUMFLNG6PD:195
REMARK  
REMARK  
REMARK  block 0 = 7 seqs
REMARK  *USER>>P1;AAC1_HUMAN:176 :      ALPHA-ACTININ 1, CYTOSKELETAL ISOFORM (F-ACTIN CROSS LINKING PROTEIN). - HOMO SAPIENS (HUMAN).
REMARK  *USER>>P1;AACT_DICDI:169 :      ALPHA-ACTININ 3, NON MUSCULAR (F-ACTIN CROSS LINKING PROTEIN). - DICTYOSTELIUM DISCOIDEUM (SLIME MOLD).
REMARK  *USER>>t0037 :  Calponin homology domain of beta-spectrin from human, 109a.a.
REMARK  *USER>>P1;S32565:153 :  actin-binding protein - slime mold (Physarum polycephalum)
REMARK  *USER>>P1;DMD_HUMAN:166 :       DYSTROPHIN. - HOMO SAPIENS (HUMAN).
REMARK  *USER>>P1;GELA_DICDI:156 :      GELATION FACTOR (ACTIN BINDING PROTEIN 120) (ABP-120). - DICTYOSTELIUM DISCOIDEUM (SLIME MOLD).
REMARK  *USER>>P1;HUMFLNG6PD:195 :      HUMFLNG6PD NID: g1203968 - human.
REMARK  
REMARK   veetsakeglllwcqrktapyknvniqnfhiswkdGLGFCALIHRHRPELIDYGKLRKD DPLTNLNTAFDVAEKYLDI
REMARK   ieelsakealllwcqrktegydrvkvgnfhtsfqdGLAFCALIHKHRPDLINFDSLNKD DKAGNLQLAFDIAEKELDI
REMARK      KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKS NAHYNLQNAFNLAEQHLGL
REMARK   egdksseeglllwcknttagydgvdiksfktgfrdGHAFLALAHKYDPAQFNYDELNKL SPDQRLEKAFEIAEKTINI
REMARK  lqqtnseki llswvrqstrnypqvnvinfttswsdGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGI
REMARK  sesdnspkaallewvrkqvapy kvvvnnftdswcdGRVLSALTDSLKPGVREMSTLTGD  AVQDIDRSMDIALEEYEI
REMARK  eakkqtpkqrllgwiqnk   lpqlpitnfsrdwqsGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGI
REMARK  
REMARK  PKMLDAEDIVGTARPDEKAIMTYvssfyhafsgaqkae
REMARK  PKMLDVSDMLDVVRPDERSVMTYvaqyyhhfsasrkae
REMARK  TKLLDPEDI SVDHPDEKSIITYVVTYYHYFSKMK   
REMARK  PKLLDVNEVMKGT ADERALILYtslffhafsaqaqar
REMARK  EKLLDPEDV DTTYPDKKSILMYitslfqvlpqqvsie
REMARK  PKIMDANDM NS LPDELSVITYvsyfrdyalnkekrd
REMARK  PQVITPEEIVDPN VDEHSVMTYlsqfpkaklkpgapl
REMARK  
REMARK  
REMARK  
REMARK  structure             sequence
REMARK  
REMARK     1     F E  *  16.9    H     s e   1
REMARK     2     A       16.5    H vi leea   2
REMARK     3     K       15.6    H ee qsgk   3
REMARK     4     P H  *  17.4    H ee qddk   4
REMARK     5     E H  *  18.3    H tlKtnkq   5
REMARK     6     D H     19.1 =  H ssSnsst   6
REMARK     7     A H  *  18.0    H aaAspsp   7
REMARK     8     V H  *  16.5 =  H kkKekek   8
REMARK     9     K H     31.0    H eeDkaeq   9
REMARK    10 **1 Y H  * 108.2    H gaAiagr  10
REMARK    11 **1 R H  * 106.4 ** H llLllll  11
REMARK    12 **1 Q H  *  90.0 ** H llLllll  12
REMARK    13  *1 S H     92.2 *  H llLselg  13
REMARK    14 **1 A H  *  94.3 ** H wwWwwww  14
REMARK    15 **1 L H **  67.2 *  H ccCvvci  15
REMARK    16 **1 T H     46.1    H qqQrrkq  16
REMARK    17 **1 L H     42.8      rrMqknn  17
REMARK    18 **1 M H  *   0.0      kkKsqtk  18
REMARK    19 **1 A H  *  40.9      ttTtvt   19
REMARK    20  *1 S H     59.7      aeAraa   20
REMARK    21 **1 H H  *  71.3      pgGnpg   21
REMARK    22 **1 F H **  77.2 **   yyYyyyl  22
REMARK    23 **1 G H  *  23.6      kdPpkdp  23
REMARK         :
REMARK    34  *1 P       12.3      nrNqvgq  24
REMARK    35  *1 Y E **  16.4 **   vvVvvvl  25
REMARK    36  *1 D       38.2      nkNn dp  26
REMARK    37  *1 A    *  43.7 ** E ivIvvii  27
REMARK    38  *1 A H     60.7    E qgHinkt  28
REMARK    39 **1 Q H     80.2 =    nnNnnsn  29
REMARK    40 **1 I H **  74.6 **   ffFffff  30
REMARK    41 **1 K H  *  36.6      hhTttks  31
REMARK    42  *1 A H     78.1      itTtdtr  32
REMARK    43 **1 N H  *  97.4 =    ssSssgd  33
REMARK    44 **1 V H ** 102.7 **   wfWwwfw  34
REMARK    45 **1 E H  *  66.5      kqRscrq  35
REMARK    46 **1 V H     75.0 =    ddDddds  36
REMARK         :
REMARK    48 **1 K H **  56.8 *=   GGGGGGG  37
REMARK    49 **1 T H     96.8 *  H LLMLRHR  38
REMARK    50 **1 L H  * 112.5 *  H GAAAVAA  39
REMARK    51 **1 T H ** 107.8 ** H FFFLLFL  40
REMARK    52 **1 A H  *  85.9    H CCNNSLG  41
REMARK    53 **1 L H  *  97.5 ** H AAAAAAA  42
REMARK    54 **1 P H  *  83.5 ** H LLLLLLL  43
REMARK    55 **1 W H  *  59.0 ** H IIIITAV  44
REMARK    56 **1 A H     43.4 =  H HHHHDHD  45
REMARK    57 **1 A    *  13.2    H RKKSSKS  46
REMARK         :
REMARK    62  *1 T    *   0.0    H HHHHLYC  47
REMARK    63  *1 E E  *   0.0      RRRRKDA  48
REMARK    64  *1 G    *   2.6 ==   PPPPPPP  49
REMARK    65  *1 G    *  30.3      EDDDGAG  50
REMARK    66 **1 D       43.2 ** H LLLLVQL  51
REMARK    67 **1 A   **  44.9 *  H IIIFRFC  52
REMARK    68 **1 R    *   5.0    H DNDDENP  53
REMARK    69  *1 P    *  22.6    H YFFWMYD  54
REMARK    70 **1 E H     62.6    H GDDNSDW  55
REMARK    71 **1 I H  *  59.3    H KSKSTED  56
REMARK    72 **1 W H  *  67.1 ** H LLLVLLS  57
REMARK    73 **1 S H     44.4    H RNKVTNW  58
REMARK    74  *1 D H     38.1      KKKCGKD  59
REMARK    75  *1 A H  *   0.0      DDSQDLA  60
REMARK    76  *1 A H     39.4      DDNQ SS  61
REMARK    77 **1 S H     48.6    H PKAS PK  62
REMARK    78 **1 F H  *  44.0    H LAHAADP  63
REMARK    79 **1 K H  *  48.2    H TGYTV V  64
REMARK    80 **1 Q H     83.5    H NNNQQQT  65
REMARK    81 **1 K H  *  88.9    H    RDRN  66
REMARK    82 **1 Q H **  94.4 ** H LLLLILA  67
REMARK    83 **1 Q H     84.3    H NQQEDER  68
REMARK    84 **1 A H  * 106.3    H TLNHRKE  69
REMARK    85 **1 F H ** 102.3 ** H AAAASAA  70
REMARK    86 **1 Q H  *  83.1 ** H FFFFMFM  71
REMARK    87 **1 D H    101.4    H DDNNDEQ  72
REMARK    88 **1 N H  * 104.7 ** H VILIIIQ  73
REMARK    89 **1 I H **  69.5 ** H AAAAAAA  74
REMARK                 :
REMARK    90 **1 V H  *  63.9 ** H LLLLYIL  78
REMARK    91 **1 K H  *  77.2    H DDGGENG  79
REMARK    92 **1 L H **  73.6 ** H IILIIII  80
REMARK    93 **1 S H  *  45.3 =  H PPTEPPP  81
REMARK    94 **1 A H     92.7 =  H KKKKKKQ  82
REMARK    95 **1 A H  *  95.6 ** H MMLLILV  83
REMARK    96 **1 A H **  74.9 ** H LLLLMLI  84
REMARK    97 **1 D H  *  45.3 =  H DDDDDDT  85
REMARK    98  *1 A       33.4 *  H AVPPAVP  86
REMARK    99  *1 G    *  27.9    H ESEENNE  87
REMARK   100  *1 D       33.6 =  H DDDDDEE  88
REMARK   101  *1 L    *  33.5 *  H IMI MVI  89
REMARK   102  *1 D H     47.9    H VL VNMV  90
REMARK   103 **1 K H  *  58.0    H GDSDSKD  91
REMARK   104 **1 L H **  48.4 *  H TVVTLGP  92
REMARK   105 **1 R H  *  39.3    H AVDT TN  93
REMARK   106 **1 A H     44.7    H RRHY     94
REMARK   107 **1 A H  *  38.3 =  H PPPPPAV  95
REMARK                 :
REMARK   108 **1 F H **   0.0 =  H EEEKEEE  97
REMARK   109 **1 G H  *  61.0    H KRKKLRH  98
REMARK   110 **1 D H  *  94.1 =  H ASSSSAS  99
REMARK   111 **1 V H ** 101.6 ** H IVIIVLV 100
REMARK   112 **1 G H  *  91.5 ** H MMILIIM 101
REMARK   113 **1 A H    110.7 *  H TTTMTLT 102
REMARK   114 **1 S H  * 114.7 ** H YYYYYYY 103
REMARK   115 **1 C H **  88.1 ** H vvVivtl 104
REMARK   116 **1 K H     80.5    H saVtsss 105
REMARK   117 **1 A H  *  88.8    H sqTsylq 106
REMARK   118 **1 C H  *  79.4 ** H fyYlfff 107
REMARK   119 **1 H H  *  57.2    H yyYfrfp 108
REMARK   120  *1 D H     66.8    H hhHqdhk 109
REMARK   121 **1 A H     83.8 *  H ahYvyaa 110
REMARK   122 **1 Y H **  74.1 *  H ffFlafk 111
REMARK   123 **1 R    *  30.8    H ssSplsl 112
REMARK   124     K E  *  18.0    H gaKqnak 113
REMARK  
REMARK  pcthit =    inf   Drawing structure in dom1.pdb
REMARK   score = 6324.191895
REMARK 
REMARK 
REMARK          5        10        15        20        25        30        35        40
REMARK  K S A K D A L L L W C Q M K T A G Y P N V N I H N F T T S W R D G M A F N A L I 
REMARK  6----------------------------------2435----------------------4749--------------
REMARK
REMARK         45        50        55        60        65        70        75        80
REMARK  H K H R P D L I D F D K L K K S N A H Y N L Q N A F N L A E Q H L G L T K L L D 
REMARK  -5863----------------------------------8183------------90      91--------------
REMARK
REMARK         85        90        95       100       105     109 
REMARK  P E D I S V D H P D E K S I I T Y V V T Y Y H Y F S K M K
REMARK  -----0204------08  09------------------------------25
REMARK
REMARK
REMARK ========================================================================
TSCORE T0037 0  1.0     1CGO - 0
REMARK ========================================================================
TALIGN T0037 0    1   19        1CGO - 0          6   24        1.0     1
TALIGN T0037 0   20   32        1CGO - 0         35   47        1.0     1
TALIGN T0037 0   33   42        1CGO - 0         49   58        1.0     1
TALIGN T0037 0   43   61        1CGO - 0         63   81        1.0     1
TALIGN T0037 0   62   69        1CGO - 0         83   90        1.0     1
TALIGN T0037 0   73   84        1CGO - 0         91  102        1.0     1
TALIGN T0037 0   85   89        1CGO - 0        104  108        1.0     1
TALIGN T0037 0   91  107        1CGO - 0        109  125        1.0     1
REMARK ========================================================================


