


PFRMAT FRV1
AUTHOR 6776-3217-5205 M J E Sternberg
AUTHOR 6776-3217-5205 Imperial Cancer Research Fund
AUTHOR 6776-3217-5205 m.sternberg@icrf.icnet.uk
AUTHOR 6776-3217-5205 Details of all workers see below
REMARK ======================================================================
REMARK Threading results from FOLDFIT:
REMARK 
REMARK Work by Michael J E Sternberg (1), Paul A Bates (1), Andrew Lyall (2)
REMARK Robert B Russell (1), Mansoor A S Saqi (2) and Roger Sayle (2)
REMARK (1) Biomolecular Modelling Laboratory
REMARK Imperial Cancer Research Fund
REMARK Lincoln Inn Fields, London, WC2A 3PX, UK
REMARK Tel +44 - 171 - 269- 3565
REMARK Fax +44 - 171 - 269 - 3479
REMARK URL http://bonsai.lif.icnet.uk
REMARK E-mail m.sternberg@icrf.icnet.uk
REMARK E-mail p.bates@icrf.icnet.uk 
REMARK E-mail r.russell@icrf.icnet.uk
REMARK (2) Bioinformatics Group
REMARK Glaxo Medicines Research Centre
REMARK Gunnels Wood Road
REMARK Stevenage, Herts, SG1 2NY, UK
REMARK Tel +44 -1438 - 745745
REMARK Tel +44 -1438 - 763082
REMARK E-mail al28044@ggr.co.uk
REMARK E-mail mass15599@ggr.co.uk
REMARK E-mail ras32425@ggr.co.uk
REMARK ===========================================================================
REMARK 
REMARK                             FOLDFIT
REMARK                             =======
REMARK The program was jointly and equally developed by the above two groups.
REMARK The program matches the (1) sequence, (2) predicted secondary structure
REMARK and (3) predicted burial of the unknown sequence against a database of 
REMARK known structures detailing (1) sequence, (2) actual and predicted secondary 
REMARK structure and (3) actual and predicted burial.  The matches are scored by 
REMARK matrices empirically derived from comparison of analogous and distantly 
REMARK homologous protein folds.  Searching is by a type I dynamic programming 
REMARK algorithm with afine secondary-structure dependant gap penalties.
REMARK 
REMARK ===========================================================================
REMARK ======================================================================
REMARK T0038 study
REMARK ======================================================================
REMARK
REMARK (1) A consensus secondary structure assignment from multiply
REMARK aligned homologous sequences was made using results of DSC (King
REMARK & Sternberg, T0038 CASP Submission) PHD (Rost & Sander), SOPMA
REMARK (Geourjon & Deleage), NNPREDICT (Kneller, Harris & Cohen), 
REMARK SSPRED (Mehta, Heringa & Argos) together with visual inspection.
REMARK A consensus prediction of secondary structure, together with
REMARK accessibilities from PHD was used as input to FOLDFIT.
REMARK
REMARK (2) T0038 was scanned by FOLDFIT and the rank order of the PDB codes 
REMARK matched by FOLDFIT are listed below in decreasing order of probability.
REMARK 
REMARK (3) The top scoring folds identified by FOLDFIT contained several
REMARK candidate all beta folds, with the top ranked scoring fold being
REMARK a beta trefoil.  However, the predominance of greek-key beta 
REMARK sandwich/Immunoglobulin type folds in the top eleven scoring proteins, 
REMARK the fact that several known cellulose binding proteins adopt Ig-type 
REMARK folds and the presence, at rank eleven, of a cellulose binding Ig-type
REMARK fold lead us to modify the  FOLDFIT assigned order.  The eleventh
REMARK ranked structure (cellulose binding domain of EXO-1,4-BETA-D-GLYCANASE, 
REMARK PDB code 1EXG) has an Ig-type fold in keeping with the majority of the 
REMARK other top ten ranked structures, has a similar function and has a similar 
REMARK disulphide bond (approximately between the N- and C- termini).  These 
REMARK similarities lead us to assign the highest probability to 1EXG.  Apart 
REMARK from this change, the assigned probabilities reflect the order returned 
REMARK by FOLDFIT and our confidence in the assigned fold.
REMARK 
REMARK (4) For each matched fold, two alignments were submitted, the 
REMARK optimal and the first sub-optimal using the algorithm of Saqi &
REMARK Sternberg (J.Mol.Biol. 219, 727-732, 1991).  The probabilities   
REMARK for the alignments were chosen subjectively.  
REMARK 
REMARK =======================================================================
REMARK =======================================================================
REMARK
REMARK The sequence was not split into domains
REMARK However, only residues 32 - 141 were considered, since these are
REMARK assigned as the cellulose binding domain in SWISSPROT.
REMARK 
SEQRES T0038 ASPIGEGTFDDGPEGWVAYGTDGPLDTSTGALCVAVPAGSAQYGVGVVLN
SEQRES T0038 GVAIEEGTTYTLRYTATASTDVTVRALVGQNGAPYGTVLDTSPALTSEPR
SEQRES T0038 QVTETFTASATYPATPAADDPEGQIAFQLGGFSADAWTLCLDDVALDSEV
SEQRES T0038 EL
REMARK
REMARK =======================================================================
TSCORE T0038 0 0.20 1I1B - 0 
TSCORE T0038 0 0.18 1CD8 - 0 
TSCORE T0038 0 0.16 1TLK - 0 
TSCORE T0038 0 0.14 1TNF A 0 
TSCORE T0038 0 0.12 1COB A 0 
TSCORE T0038 0 0.08 1SLT B 0 
TSCORE T0038 0 0.06 1FKB - 0 
TSCORE T0038 0 0.04 2MCM - 0 
TSCORE T0038 0 0.02 1MSA A 0 
TSCORE T0038 0 0.00 1TTB A 0 
TSCORE T0038 0 0.22 1EXG - 0
TSCORE T0038 0 0.00 1TIE - 0
TSCORE T0038 0 0.00 1FNA - 0
TSCORE T0038 0 0.00 2AZA A 0
TSCORE T0038 0 0.00 1HSB B 0
TSCORE T0038 0 0.00 1PAZ - 0
TSCORE T0038 0 0.00 1NCF A 0
TSCORE T0038 0 0.00 1GPR - 0
TSCORE T0038 0 0.00 1KNB - 0
TSCORE T0038 0 0.00 1PND - 0
TSCORE T0038 0 0.00 1ILR 1 0
TSCORE T0038 0 0.00 4GCR - 0
TSCORE T0038 0 0.00 2RSP A 0
TSCORE T0038 0 0.00 1KJC - 0
TSCORE T0038 0 0.00 1BFG - 0
TSCORE T0038 0 0.00 2MSB A 0
TSCORE T0038 0 0.00 2SNV - 0
TSCORE T0038 0 0.00 1RSY - 0
TSCORE T0038 0 0.00 1TNM - 0
TSCORE T0038 0 0.00 1BCX - 0
TSCORE T0038 0 0.00 1CID - 0
TSCORE T0038 0 0.00 1TEN - 0
TSCORE T0038 0 0.00 2CPL - 0
TSCORE T0038 0 0.00 1HCN B 0
TSCORE T0038 0 0.00 1DIF A 0
TSCORE T0038 0 0.00 1VIL - 0
TSCORE T0038 0 0.00 1BBP A 0
TSCORE T0038 0 0.00 1HIV A 0
TSCORE T0038 0 0.00 3CD4 - 0
TSCORE T0038 0 0.00 5P21 - 0
TSCORE T0038 0 0.00 1RND - 0
TSCORE T0038 0 0.00 3RUB S 0
TSCORE T0038 0 0.00 1ESL - 0
TSCORE T0038 0 0.00 1CAU B 0
TSCORE T0038 0 0.00 1PRR - 0
TSCORE T0038 0 0.00 1BMV 1 0
TSCORE T0038 0 0.00 1DUP A 0
TSCORE T0038 0 0.00 3HHR B 0
TSCORE T0038 0 0.00 1BET - 0
TSCORE T0038 0 0.00 1AYA A 0
TSCORE T0038 0 0.00 1PNE - 0
TSCORE T0038 0 0.00 1VMO A 0
TSCORE T0038 0 0.00 4FXN - 0
TSCORE T0038 0 0.00 1BSR A 0
TSCORE T0038 0 0.00 1CFB - 0
TSCORE T0038 0 0.00 1CDA A 0
TSCORE T0038 0 0.00 1LKK A 0
TSCORE T0038 0 0.00 1FIV A 0
TSCORE T0038 0 0.00 2APD - 0
TSCORE T0038 0 0.00 2PNA - 0
TSCORE T0038 0 0.00 2KAU B 0
TSCORE T0038 0 0.00 3SIC I 0
TSCORE T0038 0 0.00 1PTS A 0
TSCORE T0038 0 0.00 1GFF 2 0
TSCORE T0038 0 0.00 2PLD A 0
TSCORE T0038 0 0.00 1CYN A 0
TSCORE T0038 0 0.00 1CYX - 0
TSCORE T0038 0 0.00 1NCG - 0
TSCORE T0038 0 0.00 1FRD - 0
TSCORE T0038 0 0.00 2RN2 - 0
TSCORE T0038 0 0.00 2HFT - 0
TSCORE T0038 0 0.00 2PF2 - 0
TSCORE T0038 0 0.00 1TPG - 0
TSCORE T0038 0 0.00 1MUP - 0
TSCORE T0038 0 0.00 2BBK L 0
TSCORE T0038 0 0.00 1SGT - 0
TSCORE T0038 0 0.00 1DIS - 0
TSCORE T0038 0 0.00 1AAK - 0
TSCORE T0038 0 0.00 1ONC - 0
TSCORE T0038 0 0.00 1STF I 0
TSCORE T0038 0 0.00 1AGI - 0
TSCORE T0038 0 0.00 1RBP - 0
TSCORE T0038 0 0.00 1TSR A 0
TSCORE T0038 0 0.00 1ICE A 0
TSCORE T0038 0 0.00 2PRD - 0
TSCORE T0038 0 0.00 1FBR - 0
TSCORE T0038 0 0.00 1ALS - 0
TSCORE T0038 0 0.00 9RNT - 0
TSCORE T0038 0 0.00 1LTS D 0
TSCORE T0038 0 0.00 1SAC A 0
TSCORE T0038 0 0.00 8DFR - 0
TSCORE T0038 0 0.00 1MFA - 0
TSCORE T0038 0 0.00 1PDG A 0
TSCORE T0038 0 0.00 1REG X 0
TSCORE T0038 0 0.00 1PRT D 0
TSCORE T0038 0 0.00 2PCD A 0
TSCORE T0038 0 0.00 1AYH - 0
TSCORE T0038 0 0.00 1HUR A 0
TSCORE T0038 0 0.00 2STV - 0
TSCORE T0038 0 0.00 1OFV - 0
TSCORE T0038 0 0.00 1PSP A 0
TSCORE T0038 0 0.00 1MSC - 0
TSCORE T0038 0 0.00 4FX2 - 0
TSCORE T0038 0 0.00 3CHY - 0
TSCORE T0038 0 0.00 1YCC - 0
TSCORE T0038 0 0.00 1SCS - 0
TSCORE T0038 0 0.00 1GP1 A 0
TSCORE T0038 0 0.00 1ACF - 0
TSCORE T0038 0 0.00 2CHS A 0
TSCORE T0038 0 0.00 1GAR B 0
TSCORE T0038 0 0.00 1CHD - 0
TSCORE T0038 0 0.00 1GTQ A 0
TSCORE T0038 0 0.00 1VHH - 0
TSCORE T0038 0 0.00 1VCA A 0
TSCORE T0038 0 0.00 1LBA - 0
TSCORE T0038 0 0.00 2CDV - 0
TSCORE T0038 0 0.00 1PKP - 0
TSCORE T0038 0 0.00 1BBT 1 0
TSCORE T0038 0 0.00 1BPK - 0
TSCORE T0038 0 0.00 1RIS - 0
TSCORE T0038 0 0.00 1AFA 1 0
TSCORE T0038 0 0.00 1BBT 2 0
TSCORE T0038 0 0.00 1HCD - 0
TSCORE T0038 0 0.00 4SBV A 0
TSCORE T0038 0 0.00 1SNC - 0
TSCORE T0038 0 0.00 1FDD - 0
TSCORE T0038 0 0.00 1TBP A 0
TSCORE T0038 0 0.00 1BRN L 0
TSCORE T0038 0 0.00 1PK4 - 0
TSCORE T0038 0 0.00 1PRT F 0
TSCORE T0038 0 0.00 3CLA - 0
TSCORE T0038 0 0.00 1ASU - 0
TSCORE T0038 0 0.00 1SE2 - 0
TSCORE T0038 0 0.00 3TRX - 0
TSCORE T0038 0 0.00 1ILL G 0
TSCORE T0038 0 0.00 2IHL - 0
TSCORE T0038 0 0.00 1THV - 0
TSCORE T0038 0 0.00 1LFA A 0
TSCORE T0038 0 0.00 1CMB A 0
TSCORE T0038 0 0.00 1LEC - 0
TSCORE T0038 0 0.00 1PIL - 0
TSCORE T0038 0 0.00 1APK - 0
TSCORE T0038 0 0.00 1HMP A 0
TSCORE T0038 0 0.00 1PRT B 0
TSCORE T0038 0 0.00 1GMP A 0
TSCORE T0038 0 0.00 1SMP I 0
TSCORE T0038 0 0.00 1UDI I 0
TSCORE T0038 0 0.00 2TRX A 0
TSCORE T0038 0 0.00 5PAL - 0
TSCORE T0038 0 0.00 9WGA A 0
TSCORE T0038 0 0.00 1GMF A 0
TSCORE T0038 0 0.00 1KPT A 0
TSCORE T0038 0 0.00 1DYN A 0
TSCORE T0038 0 0.00 1PYI A 0
TSCORE T0038 0 0.00 1POA - 0
TSCORE T0038 0 0.00 2PHY - 0
TSCORE T0038 0 0.00 1PUC - 0
TSCORE T0038 0 0.00 1CAJ - 0
TSCORE T0038 0 0.00 1PVC 3 0
TSCORE T0038 0 0.00 8ATC B 0
TSCORE T0038 0 0.00 1CDC B 0
TSCORE T0038 0 0.00 1ICE B 0
TSCORE T0038 0 0.00 1IAA - 0
TSCORE T0038 0 0.00 2PCD M 0
TSCORE T0038 0 0.00 1ITG - 0
TSCORE T0038 0 0.00 1BGH - 0
TSCORE T0038 0 0.00 1POC - 0
TSCORE T0038 0 0.00 1GRJ - 0
TSCORE T0038 0 0.00 1LAB - 0
TSCORE T0038 0 0.00 1TSS A 0
TSCORE T0038 0 0.00 1UBI - 0
TSCORE T0038 0 0.00 1TFG - 0
TSCORE T0038 0 0.00 2AAI B 0
TSCORE T0038 0 0.00 1PPN - 0
TSCORE T0038 0 0.00 1CEW I 0
TSCORE T0038 0 0.00 1MHL A 0
TSCORE T0038 0 0.00 1CXC - 0
TSCORE T0038 0 0.00 1TIG - 0
TSCORE T0038 0 0.00 2FXB - 0
TSCORE T0038 0 0.00 1PHR - 0
TSCORE T0038 0 0.00 1ABA - 0
TSCORE T0038 0 0.00 1BTN - 0
TSCORE T0038 0 0.00 3EBX - 0
TSCORE T0038 0 0.00 1WHT B 0
TSCORE T0038 0 0.00 1ZAA C 0
TSCORE T0038 0 0.00 1CND - 0
TSCORE T0038 0 0.00 1HOE - 0
TSCORE T0038 0 0.00 4CPV - 0
TSCORE T0038 0 0.00 2DNJ A 0
TSCORE T0038 0 0.00 2BOP A 0
TSCORE T0038 0 0.00 1PHT - 0
TSCORE T0038 0 0.00 1ILL R 0
TSCORE T0038 0 0.00 3GAP A 0
TSCORE T0038 0 0.00 1HRE - 0
TSCORE T0038 0 0.00 1MJC - 0
TSCORE T0038 0 0.00 1POH - 0
TSCORE T0038 0 0.00 1PBA - 0
TSCORE T0038 0 0.00 1VCC - 0
TSCORE T0038 0 0.00 1HDR - 0
TSCORE T0038 0 0.00 1WAP A 0
TSCORE T0038 0 0.00 1HJR A 0
TSCORE T0038 0 0.00 1HSQ - 0
TSCORE T0038 0 0.00 1PDN C 0
TSCORE T0038 0 0.00 1CWP A 0
TSCORE T0038 0 0.00 1IAG - 0
TSCORE T0038 0 0.00 1ATA - 0
TSCORE T0038 0 0.00 1GPC - 0
TSCORE T0038 0 0.00 1LTS A 0
TSCORE T0038 0 0.00 2MHR - 0
TSCORE T0038 0 0.00 2SN3 - 0
TSCORE T0038 0 0.00 1MOL A 0
TSCORE T0038 0 0.00 1CTM - 0
TSCORE T0038 0 0.00 1OPR - 0
TSCORE T0038 0 0.00 1HCN A 0
TSCORE T0038 0 0.00 1ILM B 0
TSCORE T0038 0 0.00 1HUL A 0
TSCORE T0038 0 0.00 1DBS - 0
TSCORE T0038 0 0.00 2KAU A 0
TSCORE T0038 0 0.00 2MEV 1 0
TSCORE T0038 0 0.00 1DSB A 0
TSCORE T0038 0 0.00 3B5C - 0
TSCORE T0038 0 0.00 1RVE A 0
TSCORE T0038 0 0.00 1DMA A 0
TSCORE T0038 0 0.00 1HIP - 0
TSCORE T0038 0 0.00 1CUS - 0
TSCORE T0038 0 0.00 1DCH A 0
TSCORE T0038 0 0.00 1EDT - 0
TSCORE T0038 0 0.00 2TMV P 0
TSCORE T0038 0 0.00 2MTA C 0
TSCORE T0038 0 0.00 1L92 - 0
TSCORE T0038 0 0.00 1OTG A 0
TSCORE T0038 0 0.00 1TIF - 0
TSCORE T0038 0 0.00 1PLQ - 0
TSCORE T0038 0 0.00 1HSB A 0
TSCORE T0038 0 0.00 1RCB - 0
TSCORE T0038 0 0.00 1RFB A 0
TSCORE T0038 0 0.00 3PGM - 0
TSCORE T0038 0 0.00 1HUM A 0
TSCORE T0038 0 0.00 1AHC - 0
TSCORE T0038 0 0.00 1PVC 1 0
TSCORE T0038 0 0.00 1HTM D 0
TSCORE T0038 0 0.00 1TGX A 0
TSCORE T0038 0 0.00 2LAO - 0
TSCORE T0038 0 0.00 1ERG - 0
TSCORE T0038 0 0.00 1ARB - 0
TSCORE T0038 0 0.00 1AK3 A 0
TSCORE T0038 0 0.00 1CHC - 0
TSCORE T0038 0 0.00 1PRT A 0
TSCORE T0038 0 0.00 1HPI - 0
TSCORE T0038 0 0.00 2END - 0
TSCORE T0038 0 0.00 1SRA - 0
TSCORE T0038 0 0.00 2CCY A 0
TSCORE T0038 0 0.00 1LPB A 0
TSCORE T0038 0 0.00 1UDG - 0
TSCORE T0038 0 0.00 1PRC H 0
TSCORE T0038 0 0.00 1TNS - 0
TSCORE T0038 0 0.00 1CGO - 0
TSCORE T0038 0 0.00 451C - 0
TSCORE T0038 0 0.00 1HST A 0
TSCORE T0038 0 0.00 1HCC - 0
TSCORE T0038 0 0.00 1PTX - 0
TSCORE T0038 0 0.00 1MAT - 0
TSCORE T0038 0 0.00 1TPF A 0
TSCORE T0038 0 0.00 1MML - 0
TSCORE T0038 0 0.00 1FNB - 0
TSCORE T0038 0 0.00 1CSE E 0
TSCORE T0038 0 0.00 1YPC I 0
TSCORE T0038 0 0.00 1BPB - 0
TSCORE T0038 0 0.00 1FIA B 0
TSCORE T0038 0 0.00 1NFP - 0
TSCORE T0038 0 0.00 1PYA B 0
TSCORE T0038 0 0.00 1WHT A 0
TSCORE T0038 0 0.00 1PYA A 0
TSCORE T0038 0 0.00 1PVU A 0
TSCORE T0038 0 0.00 1BBH A 0
TSCORE T0038 0 0.00 1CYI - 0
TSCORE T0038 0 0.00 1BOV A 0
TSCORE T0038 0 0.00 1HAN - 0
TSCORE T0038 0 0.00 1ASH - 0
TSCORE T0038 0 0.00 1PYP - 0
TSCORE T0038 0 0.00 1CNS A 0
TSCORE T0038 0 0.00 1XXB A 0
TSCORE T0038 0 0.00 1SAP - 0
TSCORE T0038 0 0.00 4MBA - 0
TSCORE T0038 0 0.00 2HIP A 0
TSCORE T0038 0 0.00 1SPB P 0
TSCORE T0038 0 0.00 1NEQ - 0
TSCORE T0038 0 0.00 1MCA A 0
TSCORE T0038 0 0.00 1HSA A 0
TSCORE T0038 0 0.00 1BAB A 0
TSCORE T0038 0 0.00 1ECM A 0
TSCORE T0038 0 0.00 2HNP - 0
TSCORE T0038 0 0.00 1DTR - 0
TSCORE T0038 0 0.00 1DEA A 0
TSCORE T0038 0 0.00 1PVC 4 0
TSCORE T0038 0 0.00 1LLI A 0
TSCORE T0038 0 0.00 1HDC A 0
TSCORE T0038 0 0.00 3ITR - 0
TSCORE T0038 0 0.00 1CSE I 0
TSCORE T0038 0 0.00 1PVC 2 0
TSCORE T0038 0 0.00 3IL8 - 0
TSCORE T0038 0 0.00 1UBS A 0
TSCORE T0038 0 0.00 1COO - 0
TSCORE T0038 0 0.00 1EAF - 0
TSCORE T0038 0 0.00 1LIS - 0
TSCORE T0038 0 0.00 1LEA - 0
TSCORE T0038 0 0.00 2GF1 - 0
TSCORE T0038 0 0.00 1AAL A 0
TSCORE T0038 0 0.00 1BAM - 0
TSCORE T0038 0 0.00 1CC5 - 0
TSCORE T0038 0 0.00 1DRI - 0
TSCORE T0038 0 0.00 1FXR A 0
TSCORE T0038 0 0.00 1LXA - 0
TSCORE T0038 0 0.00 1TML - 0
TSCORE T0038 0 0.00 3AAH B 0
TSCORE T0038 0 0.00 1ABO A 0
TSCORE T0038 0 0.00 1FCS - 0
TSCORE T0038 0 0.00 1EGF - 0
TSCORE T0038 0 0.00 1HLB - 0
TSCORE T0038 0 0.00 2DRP A 0
TSCORE T0038 0 0.00 2SCP A 0
TSCORE T0038 0 0.00 1TFI - 0
TSCORE T0038 0 0.00 1SHG - 0
TSCORE T0038 0 0.00 1NAR - 0
TSCORE T0038 0 0.00 1NBA A 0
TSCORE T0038 0 0.00 1HRY A 0
TSCORE T0038 0 0.00 1FXD - 0
TSCORE T0038 0 0.00 1ORA - 0
TSCORE T0038 0 0.00 1TYS - 0
TSCORE T0038 0 0.00 2PIA - 0
TSCORE T0038 0 0.00 3MDS A 0
TSCORE T0038 0 0.00 1HCG B 0
TSCORE T0038 0 0.00 4BLM A 0
TSCORE T0038 0 0.00 1SCU A 0
TSCORE T0038 0 0.00 1CTF - 0
TSCORE T0038 0 0.00 1STD - 0
TSCORE T0038 0 0.00 1MMO G 0
TSCORE T0038 0 0.00 1MDY A 0
TSCORE T0038 0 0.00 4SGB I 0
TSCORE T0038 0 0.00 1FLP - 0
TSCORE T0038 0 0.00 2WRP R 0
TSCORE T0038 0 0.00 1CPC L 0
TSCORE T0038 0 0.00 2SPC A 0
TSCORE T0038 0 0.00 1GAT A 0
TSCORE T0038 0 0.00 1ISU A 0
TSCORE T0038 0 0.00 1DAA A 0
TSCORE T0038 0 0.00 1CNV - 0
TSCORE T0038 0 0.00 1PBN - 0
TSCORE T0038 0 0.00 1FCD C 0
TSCORE T0038 0 0.00 1DIH - 0
TSCORE T0038 0 0.00 1GDI - 0
TSCORE T0038 0 0.00 1HBG - 0
TSCORE T0038 0 0.00 1HYP - 0
TSCORE T0038 0 0.00 256B A 0
TSCORE T0038 0 0.00 1LKI - 0
TSCORE T0038 0 0.00 1HUW - 0
TSCORE T0038 0 0.00 1HPT - 0
TSCORE T0038 0 0.00 1YPT A 0
TSCORE T0038 0 0.00 153L - 0
TSCORE T0038 0 0.00 1SSR - 0
TSCORE T0038 0 0.00 1ECO - 0
TSCORE T0038 0 0.00 1ERI A 0
TSCORE T0038 0 0.00 1CPC A 0
TSCORE T0038 0 0.00 1ILK - 0
TSCORE T0038 0 0.00 1PGS - 0
TSCORE T0038 0 0.00 1PDA - 0
TSCORE T0038 0 0.00 1GLQ A 0
TSCORE T0038 0 0.00 1REC - 0
TSCORE T0038 0 0.00 1GLT - 0
TSCORE T0038 0 0.00 1LE4 - 0
TSCORE T0038 0 0.00 1GHR - 0
TSCORE T0038 0 0.00 1AAP A 0
TSCORE T0038 0 0.00 1BGC - 0
TSCORE T0038 0 0.00 1CSN - 0
TSCORE T0038 0 0.00 1ITH A 0
TSCORE T0038 0 0.00 1R69 - 0
TSCORE T0038 0 0.00 1UTG - 0
TSCORE T0038 0 0.00 1LFB - 0
TSCORE T0038 0 0.00 2LIG A 0
TSCORE T0038 0 0.00 1NIP B 0
TSCORE T0038 0 0.00 1PPK E 0
TSCORE T0038 0 0.00 8RXN A 0
TSCORE T0038 0 0.00 3TGL - 0
TSCORE T0038 0 0.00 1APT - 0
TSCORE T0038 0 0.00 1ENY - 0
TSCORE T0038 0 0.00 1PRN - 0
TSCORE T0038 0 0.00 3SDH A 0
TSCORE T0038 0 0.00 1BCO - 0
TSCORE T0038 0 0.00 1FLX - 0
TSCORE T0038 0 0.00 1APL C 0
TSCORE T0038 0 0.00 1OTF A 0
TSCORE T0038 0 0.00 1RCI - 0
TSCORE T0038 0 0.00 1OVI - 0
TSCORE T0038 0 0.00 1CGJ I 0
TSCORE T0038 0 0.00 1IXA - 0
TSCORE T0038 0 0.00 1HYM A 0
TSCORE T0038 0 0.00 1AEP - 0
TSCORE T0038 0 0.00 1CTC - 0
TSCORE T0038 0 0.00 1NIF - 0
TSCORE T0038 0 0.00 1CLG A 0
TSCORE T0038 0 0.00 1HNR - 0
TSCORE T0038 0 0.00 1THT A 0
TSCORE T0038 0 0.00 1ENH - 0
TSCORE T0038 0 0.00 2BBV A 0
TSCORE T0038 0 0.00 1FRP A 0
TSCORE T0038 0 0.00 1PNK A 0
TSCORE T0038 0 0.00 1EMD - 0
TSCORE T0038 0 0.00 1ADS - 0
TSCORE T0038 0 0.00 1ABK - 0
TSCORE T0038 0 0.00 1LCC A 0
TSCORE T0038 0 0.00 1PDC - 0
TSCORE T0038 0 0.00 3SGB I 0
TSCORE T0038 0 0.00 1GD1 O 0
TSCORE T0038 0 0.00 1HLH A 0
TSCORE T0038 0 0.00 1AMP - 0
TSCORE T0038 0 0.00 8ABP - 0
TSCORE T0038 0 0.00 1EZM - 0
TSCORE T0038 0 0.00 1ESC - 0
TSCORE T0038 0 0.00 2CLG A 0
TSCORE T0038 0 0.00 1IRK - 0
TSCORE T0038 0 0.00 7API B 0
TSCORE T0038 0 0.00 2MEV 4 0
TSCORE T0038 0 0.00 2DLN - 0
TSCORE T0038 0 0.00 1HGE A 0
TSCORE T0038 0 0.00 2HAD - 0
TSCORE T0038 0 0.00 1HMY - 0
TSCORE T0038 0 0.00 2BPA 3 0
TSCORE T0038 0 0.00 1QOR A 0
TSCORE T0038 0 0.00 1NAL 1 0
TSCORE T0038 0 0.00 2TCT - 0
TSCORE T0038 0 0.00 3ECA A 0
TSCORE T0038 0 0.00 1SCM A 0
TSCORE T0038 0 0.00 2ACH B 0
TSCORE T0038 0 0.00 1TLF A 0
TSCORE T0038 0 0.00 2BBK H 0
TSCORE T0038 0 0.00 1TAH B 0
TSCORE T0038 0 0.00 2REB - 0
TSCORE T0038 0 0.00 1SBP - 0
TSCORE T0038 0 0.00 1INA - 0
TSCORE T0038 0 0.00 1BTD A 0
TSCORE T0038 0 0.00 1XYZ A 0
TSCORE T0038 0 0.00 1PFK A 0
TSCORE T0038 0 0.00 1CAG B 0
TSCORE T0038 0 0.00 1PTQ - 0
TSCORE T0038 0 0.00 1BIA - 0
TSCORE T0038 0 0.00 1TAB I 0
TSCORE T0038 0 0.00 1BI6 H 0
TSCORE T0038 0 0.00 1FOS E 0
TSCORE T0038 0 0.00 1FOS F 0
TSCORE T0038 0 0.00 1HLE B 0
TSCORE T0038 0 0.00 1CSM A 0
TSCORE T0038 0 0.00 2CRD - 0
TSCORE T0038 0 0.00 1MLP A 0
TSCORE T0038 0 0.00 1HCR A 0
TSCORE T0038 0 0.00 1YRN A 0
TSCORE T0038 0 0.00 2LIV - 0
TSCORE T0038 0 0.00 1TCA - 0
TSCORE T0038 0 0.00 1APM E 0
TSCORE T0038 0 0.00 1BMT A 0
TSCORE T0038 0 0.00 1BBL - 0
TSCORE T0038 0 0.00 1HTR P 0
TSCORE T0038 0 0.00 1COL A 0
TSCORE T0038 0 0.00 1DFN A 0
TSCORE T0038 0 0.00 1CBN - 0
TSCORE T0038 0 0.00 1MYK A 0
TSCORE T0038 0 0.00 1BHP - 0
TSCORE T0038 0 0.00 1MLA - 0
TSCORE T0038 0 0.00 1OMF - 0
TSCORE T0038 0 0.00 1FC2 C 0
TSCORE T0038 0 0.00 2CYP - 0
TSCORE T0038 0 0.00 1PAI B 0
TSCORE T0038 0 0.00 1DME - 0
TSCORE T0038 0 0.00 2SAS - 0
TSCORE T0038 0 0.00 6LDH - 0
TSCORE T0038 0 0.00 1DMC - 0
TSCORE T0038 0 0.00 1CTT - 0
TSCORE T0038 0 0.00 1HLE A 0
TSCORE T0038 0 0.00 1PPT - 0
TSCORE T0038 0 0.00 1GIA - 0
TSCORE T0038 0 0.00 1MEA - 0
TSCORE T0038 0 0.00 1EHS - 0
TSCORE T0038 0 0.00 2OHX A 0
TSCORE T0038 0 0.00 9LDT A 0
TSCORE T0038 0 0.00 2SIL - 0
TSCORE T0038 0 0.00 1BBA - 0
TSCORE T0038 0 0.00 1BDM A 0
TSCORE T0038 0 0.00 1BBT 4 0
TSCORE T0038 0 0.00 1CCO - 0
TSCORE T0038 0 0.00 2POL A 0
TSCORE T0038 0 0.00 1APH B 0
TSCORE T0038 0 0.00 4TS1 A 0
TSCORE T0038 0 0.00 1ADD - 0
TSCORE T0038 0 0.00 3BCL - 0
TSCORE T0038 0 0.00 2BLT A 0
TSCORE T0038 0 0.00 1ARP - 0
TSCORE T0038 0 0.00 1FBA A 0
TSCORE T0038 0 0.00 1AHT L 0
TSCORE T0038 0 0.00 2NAC A 0
TSCORE T0038 0 0.00 1PPE I 0
TSCORE T0038 0 0.00 1LTS C 0
TSCORE T0038 0 0.00 1NSC A 0
TSCORE T0038 0 0.00 1PEA - 0
TSCORE T0038 0 0.00 1BAC - 0
TSCORE T0038 0 0.00 1ERL - 0
TSCORE T0038 0 0.00 3PTE - 0
TSCORE T0038 0 0.00 1IFI - 0
TSCORE T0038 0 0.00 1HPM - 0
TSCORE T0038 0 0.00 1BVP 1 0
TSCORE T0038 0 0.00 1PRC C 0
TSCORE T0038 0 0.00 1WFB A 0
TSCORE T0038 0 0.00 1GCN - 0
TSCORE T0038 0 0.00 1CEO - 0
TSCORE T0038 0 0.00 1PTA - 0
TSCORE T0038 0 0.00 2MNR - 0
TSCORE T0038 0 0.00 1CHR A 0
TSCORE T0038 0 0.00 1BOM B 0
TSCORE T0038 0 0.00 1COS A 0
TSCORE T0038 0 0.00 1LYP - 0
TSCORE T0038 0 0.00 1EFT - 0
TSCORE T0038 0 0.00 2ZTA A 0
TSCORE T0038 0 0.00 1XRA - 0
TSCORE T0038 0 0.00 1APH A 0
TSCORE T0038 0 0.00 1OYB - 0
TSCORE T0038 0 0.00 1RLX A 0
TSCORE T0038 0 0.00 2PTE E 0
TSCORE T0038 0 0.00 2MLT A 0
TSCORE T0038 0 0.00 1DOB - 0
TSCORE T0038 0 0.00 1RLX B 0
TSCORE T0038 0 0.00 1BOM A 0
TSCORE T0038 0 0.00 1RPB - 0
TSCORE T0038 0 0.00 1SCU B 0
TSCORE T0038 0 0.00 1APM I 0
TSCORE T0038 0 0.00 6RLX A 0
TSCORE T0038 0 0.00 1EDN - 0
TSCORE T0038 0 0.00 6RLX B 0
TSCORE T0038 0 0.00 1MMH 3 0
TSCORE T0038 0 0.00 1OMP - 0
TSCORE T0038 0 0.00 1MMH 5 0
TSCORE T0038 0 0.00 1FCD A 0
TSCORE T0038 0 0.00 1PHP - 0
TSCORE T0038 0 0.00 1MMH 6 0
TSCORE T0038 0 0.00 1MMH 7 0
TSCORE T0038 0 0.00 1SOL - 0
TSCORE T0038 0 0.00 4ICD - 0
TSCORE T0038 0 0.00 1CDL G 0
TSCORE T0038 0 0.00 1CHM A 0
TSCORE T0038 0 0.00 1BTS - 0
TSCORE T0038 0 0.00 1UBS B 0
TSCORE T0038 0 0.00 2IFO - 0
TSCORE T0038 0 0.00 1AXN - 0
TSCORE T0038 0 0.00 1BTQ - 0
TSCORE T0038 0 0.00 1AMG - 0
TSCORE T0038 0 0.00 1INP - 0
TSCORE T0038 0 0.00 1IFM - 0
TSCORE T0038 0 0.00 1PRC M 0
TSCORE T0038 0 0.00 1CEL A 0
TSCORE T0038 0 0.00 1MMH 4 0
TSCORE T0038 0 0.00 1GFF 1 0
TSCORE T0038 0 0.00 7AAT A 0
TSCORE T0038 0 0.00 1MMH 2 0
TSCORE T0038 0 0.00 1AMB - 0
TSCORE T0038 0 0.00 1XIC - 0
TSCORE T0038 0 0.00 1MMH 1 0
TSCORE T0038 0 0.00 1ADE A 0
TSCORE T0038 0 0.00 1ADM A 0
TSCORE T0038 0 0.00 1MRR A 0
TSCORE T0038 0 0.00 2DKB - 0
TSCORE T0038 0 0.00 1BNC A 0
TSCORE T0038 0 0.00 3MDD A 0
TSCORE T0038 0 0.00 1ALK A 0
TSCORE T0038 0 0.00 1PKY A 0
TSCORE T0038 0 0.00 1FPS - 0
TSCORE T0038 0 0.00 1PHB - 0
TSCORE T0038 0 0.00 1LGR - 0
TSCORE T0038 0 0.00 1PII - 0
TSCORE T0038 0 0.00 1NHP - 0
TSCORE T0038 0 0.00 1VSG A 0
TSCORE T0038 0 0.00 1TPL A 0
TSCORE T0038 0 0.00 3GRS - 0
TSCORE T0038 0 0.00 4ENL - 0
TSCORE T0038 0 0.00 1GPH 1 0
TSCORE T0038 0 0.00 1GLK - 0
TSCORE T0038 0 0.00 1AKL - 0
TSCORE T0038 0 0.00 1GCB - 0
TSCORE T0038 0 0.00 1DPG A 0
TSCORE T0038 0 0.00 1LAM - 0
TSCORE T0038 0 0.00 1MMO B 0
TSCORE T0038 0 0.00 1HNY - 0
TSCORE T0038 0 0.00 1MIN A 0
TSCORE T0038 0 0.00 1GLN - 0
TSCORE T0038 0 0.00 1MYP C 0
TSCORE T0038 0 0.00 5RUB B 0
TSCORE T0038 0 0.00 1BTC - 0
TSCORE T0038 0 0.00 1CBG - 0
TSCORE T0038 0 0.00 1MHL C 0
TSCORE T0038 0 0.00 3COX - 0
TSCORE T0038 0 0.00 1BNH - 0
TSCORE T0038 0 0.00 1HKG - 0
TSCORE T0038 0 0.00 1GLA G 0
TSCORE T0038 0 0.00 1DPP A 0
TSCORE T0038 0 0.00 2CTS - 0
TSCORE T0038 0 0.00 1GPM A 0
TSCORE T0038 0 0.00 1LYL A 0
TSCORE T0038 0 0.00 1LYL B 0
TSCORE T0038 0 0.00 3GLY - 0
TSCORE T0038 0 0.00 2HPD A 0
TSCORE T0038 0 0.00 8CAT A 0
TSCORE T0038 0 0.00 1OLB A 0
TSCORE T0038 0 0.00 1CTN - 0
TSCORE T0038 0 0.00 1DDT - 0
TSCORE T0038 0 0.00 1ASO A 0
TSCORE T0038 0 0.00 1PYD A 0
TSCORE T0038 0 0.00 3DPV A 0
TSCORE T0038 0 0.00 1THG - 0
TSCORE T0038 0 0.00 1SCC - 0
TSCORE T0038 0 0.00 1CLC - 0
TSCORE T0038 0 0.00 1TSP - 0
TSCORE T0038 0 0.00 1OEL A 0
TSCORE T0038 0 0.00 3AAH A 0
TSCORE T0038 0 0.00 1PNK B 0
TSCORE T0038 0 0.00 1ECL - 0
TSCORE T0038 0 0.00 3PMG A 0
TSCORE T0038 0 0.00 2KAU C 0
TSCORE T0038 0 0.00 1POX A 0
TSCORE T0038 0 0.00 1PTH - 0
TSCORE T0038 0 0.00 1MMO D 0
TSCORE T0038 0 0.00 1DLC - 0
TSCORE T0038 0 0.00 1GAL - 0
TSCORE T0038 0 0.00 1AOR A 0
TSCORE T0038 0 0.00 1LLA - 0
TSCORE T0038 0 0.00 1GOF - 0
TSCORE T0038 0 0.00 1LCF - 0
TSCORE T0038 0 0.00 1TRK A 0
TSCORE T0038 0 0.00 1CDG - 0
TSCORE T0038 0 0.00 1OAC A 0
TSCORE T0038 0 0.00 1ORD A 0
TSCORE T0038 0 0.00 8ACN - 0
TSCORE T0038 0 0.00 1GPB - 0
TSCORE T0038 0 0.00 1DIK - 0
TSCORE T0038 0 0.00 1DHX - 0
TSCORE T0038 0 0.00 1RAE - 0
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 114
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  114  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  114 Check: 100  Weight: 1.00
REMARK Name:          1cd8-0 Len:  114 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ..LCVAVPAG SAQYGVGVVL NGVAI.EEGT TYTLRYTATA STDVTVRALV 
REMARK      1cd8-0  SQFRVSPLDR TWNLGETVEL KCQVLLSNPT SGCSWLFQPR GAAASPTFLL 
REMARK              51                                                 100
REMARK      T0038   GQNGAPYGTV LDTSPALTSE PRQVTETFTA SATYPATPAA DDPEGQIAFQ 
REMARK      1cd8-0  YLSQNKPKAA EGLDTQRFSG KRLGDTFVLT LSDFRRENEG YYFCSALSNS 
REMARK              101            114
REMARK      T0038   LGGFSADAWT LCL.
REMARK      1cd8-0  IMYFSHFVPV FLPA
TALIGN T0038 0   32   54 1CD8 - 0       3      25     0.60   1 
TALIGN T0038 0   55  141 1CD8 - 0      27     113     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 115
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  115  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  115 Check: 100  Weight: 1.00
REMARK Name:          1cd8-0 Len:  115 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   LCVAVPAGSA QYGVGVVLNG VAIEEGTT.Y T.LRYTATAS TDVTVRALVG 
REMARK      1cd8-0  SQFRVSPLDR TWNLGETVEL KCQVLLSNPT SGCSWLFQPR GAAASPTFLL 
REMARK              51                                                 100
REMARK      T0038   QNGAPYGTVL DTSPALTSEP RQVTETFTAS ATYPATPAAD DPEGQIAFQL 
REMARK      1cd8-0  YLSQNKPKAA EGLDTQRFSG KRLGDTFVLT LS.DFRRENE GYYFCSALSN 
REMARK              101             115
REMARK      T0038   G.GFSADAWT LCL..
REMARK      1cd8-0  SIMYFSHFVP VFLPA
TALIGN T0038 0   32   59 1CD8 - 0       1      28     0.40   2 
TALIGN T0038 0   60   61 1CD8 - 0      30      31     0.40   2 
TALIGN T0038 0   62  111 1CD8 - 0      33      82     0.40   2 
TALIGN T0038 0  113  130 1CD8 - 0      83     100     0.40   2 
TALIGN T0038 0  131  141 1CD8 - 0     102     112     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 153
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  153  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  153 Check: 100  Weight: 1.00
REMARK Name:          1cobA0 Len:  153 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   LCVAVPAGSA QYGVGVVLNG VAIEEGTTYT LRYTATASTD .VTVRALVG. 
REMARK      1cobA0  ATKAVCVLKG DGPVQ..GTI HFEAKGDTVV VTGSITGLTE GDHGFHVHQF 
REMARK              51                                                 100
REMARK      T0038   .QNGAPY... .GTVLDTSPA L..TSEPRQ. .V.TETFTAS ATY..PATPA 
REMARK      1cobA0  GDNTQGCTSA GPHFNPLSKK HGGPKDEERH VGDLGNVTAD KNGVAIVDIV 
REMARK              101                                                150
REMARK      T0038   AD....D.PE G....QIAFQ LGG....FSA D......... ...AWTLCL. 
REMARK      1cobA0  DPLISLSGEY SIIGRTMVVH EKPDDLGRGG NEESTKTGNA GSRLACGVIG 
REMARK              151 153
REMARK      T0038   ...
REMARK      1cobA0  IAK
TALIGN T0038 0   32   46 1COB A 0       1      15     0.60   1 
TALIGN T0038 0   49   71 1COB A 0      16      38     0.60   1 
TALIGN T0038 0   72   79 1COB A 0      40      47     0.60   1 
TALIGN T0038 0   80   85 1COB A 0      50      55     0.60   1 
TALIGN T0038 0   86   95 1COB A 0      60      69     0.60   1 
TALIGN T0038 0   96  101 1COB A 0      72      77     0.60   1 
TALIGN T0038 0  102  102 1COB A 0      80      80     0.60   1 
TALIGN T0038 0  103  112 1COB A 0      82      91     0.60   1 
TALIGN T0038 0  113  119 1COB A 0      94     100     0.60   1 
TALIGN T0038 0  120  120 1COB A 0     105     105     0.60   1 
TALIGN T0038 0  121  123 1COB A 0     107     109     0.60   1 
TALIGN T0038 0  124  131 1COB A 0     114     121     0.60   1 
TALIGN T0038 0  132  135 1COB A 0     126     129     0.60   1 
TALIGN T0038 0  136  141 1COB A 0     142     147     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 151
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  151  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  151 Check: 100  Weight: 1.00
REMARK Name:          1cobA0 Len:  151 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ...LCVAVPA GSA.QYGVGV VLNG..VAIE EGTTY....T LRYTATA.ST 
REMARK      1cobA0  ATKAVCVLKG DGPVQGTIHF EAKGDTVVVT GSITGLTEGD HGFHVHQFGD 
REMARK              51                                                 100
REMARK      T0038   DVTVR....A LVGQNGAPYG TVLDTSPALT ........SE PRQVTETFTA 
REMARK      1cobA0  NTQGCTSAGP HFNPLSKKHG GPKDEERHVG DLGNVTADKN GVAIVDIVDP 
REMARK              101                                                150
REMARK      T0038   SA..TYPA.. ...TPAADDP EGQIAFQLG. ....GFSA.. .DAWTLCL.. 
REMARK      1cobA0  LISLSGEYSI IGRTMVVHEK PDDLGRGGNE ESTKTGNAGS RLACGVIGIA 
REMARK              151151
REMARK      T0038   .
REMARK      1cobA0  K
TALIGN T0038 0   32   41 1COB A 0       4      13     0.40   2 
TALIGN T0038 0   42   51 1COB A 0      15      24     0.40   2 
TALIGN T0038 0   52   60 1COB A 0      27      35     0.40   2 
TALIGN T0038 0   61   68 1COB A 0      40      47     0.40   2 
TALIGN T0038 0   69   75 1COB A 0      49      55     0.40   2 
TALIGN T0038 0   76   96 1COB A 0      60      80     0.40   2 
TALIGN T0038 0   97  110 1COB A 0      89     102     0.40   2 
TALIGN T0038 0  111  114 1COB A 0     105     108     0.40   2 
TALIGN T0038 0  115  130 1COB A 0     114     129     0.40   2 
TALIGN T0038 0  131  134 1COB A 0     135     138     0.40   2 
TALIGN T0038 0  135  141 1COB A 0     142     148     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 119
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  119  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  119 Check: 100  Weight: 1.00
REMARK Name:          1exg-0 Len:  119 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   L......CVA VP.AGSAQYG VGVVLNGVAI EEGTTYTLRY TATASTDVTV 
REMARK      1exg-0  ASSGPAGCQV LWGVNQWNTG FTANVTVKNT SSAPVDGWTL TFSFPSGQQV 
REMARK              51                                                 100
REMARK      T0038   RALVG..QNG APYGTVLDTS PALTSEPRQV TETFTASATY PATPAADDPE 
REMARK      1exg-0  TQAWSSTVTQ SGSAVTVRNA PWNGSIPAGG TAQFGFNGSH TGTNA..APT 
REMARK              101                 119
REMARK      T0038   GQIAFQLGGF SADAWTLCL
REMARK      1exg-0  ...AFSLNG. ...TPCTVG
TALIGN T0038 0   32   32 1EXG - 0       1       1     0.60   1 
TALIGN T0038 0   33   37 1EXG - 0       8      12     0.60   1 
TALIGN T0038 0   38   79 1EXG - 0      14      55     0.60   1 
TALIGN T0038 0   80  117 1EXG - 0      58      95     0.60   1 
TALIGN T0038 0  120  122 1EXG - 0      96      98     0.60   1 
TALIGN T0038 0  126  131 1EXG - 0      99     104     0.60   1 
TALIGN T0038 0  136  141 1EXG - 0     105     110     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 119
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  119  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  119 Check: 100  Weight: 1.00
REMARK Name:          1exg-0 Len:  119 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   LCVAVPAGSA QYGVGVVLNG VAIEEGTTYT LRYTATASTD .VTVRALVGQ 
REMARK      1exg-0  .....ASSGP AG..CQVLWG V.NQWNTGFT ANVTVKNTSS APVDGWTLTF 
REMARK              51                                                 100
REMARK      T0038   NGAPYGTVLD TSPALTSEPR QVTETFTASA TYPATPAADD PEGQIAFQLG 
REMARK      1exg-0  SFPSGQQVTQ AWSSTVTQSG S.AVTVRNAP WNGSIPAGGT AQFGFNGSHT 
REMARK              101                 119
REMARK      T0038   .GFSADA.WT LC.L.....
REMARK      1exg-0  GTNAAPTAFS LNGTPCTVG
TALIGN T0038 0   37   43 1EXG - 0       1       7     0.40   2 
TALIGN T0038 0   46   52 1EXG - 0       8      14     0.40   2 
TALIGN T0038 0   54   71 1EXG - 0      15      32     0.40   2 
TALIGN T0038 0   72  101 1EXG - 0      34      63     0.40   2 
TALIGN T0038 0  103  130 1EXG - 0      64      91     0.40   2 
TALIGN T0038 0  131  136 1EXG - 0      93      98     0.40   2 
TALIGN T0038 0  137  140 1EXG - 0     100     103     0.40   2 
TALIGN T0038 0  141  141 1EXG - 0     105     105     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 118
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  118  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  118 Check: 100  Weight: 1.00
REMARK Name:          1fkb-0 Len:  118 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ....LCVAVP AGSA..QYGV GVVLNGVAIE EGTTYTLRYT ATASTDVTVR 
REMARK      1fkb-0  GVQVETISPG DGRTFPKRGQ TCVVHYTGML EDGK...KFD SSRDRNKPFK 
REMARK              51                                                 100
REMARK      T0038   ALVGQNGAPY GTVLDTSPAL TSEPRQVTET FTASATYPAT ..PAADDPEG 
REMARK      1fkb-0  FMLGKQ.EVI RGWEEGVAQM SV.GQRAKLT ISPDYAYGAT GHPGIIPPHA 
REMARK              101                118
REMARK      T0038   QIAFQLGGFS ADAWTLCL
REMARK      1fkb-0  TLVFDVELLK LE......
TALIGN T0038 0   32   41 1FKB - 0       5      14     0.60   1 
TALIGN T0038 0   42   59 1FKB - 0      17      34     0.60   1 
TALIGN T0038 0   63   81 1FKB - 0      35      53     0.60   1 
TALIGN T0038 0   83   97 1FKB - 0      54      68     0.60   1 
TALIGN T0038 0   99  115 1FKB - 0      69      85     0.60   1 
TALIGN T0038 0  116  135 1FKB - 0      88     107     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 112
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  112  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  112 Check: 100  Weight: 1.00
REMARK Name:          1fkb-0 Len:  112 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ..LCVAVPAG SAQYGVGVVL NGVAIEEGTT YTLRYTATAS TDVTVRALVG 
REMARK      1fkb-0  GVQVETISPG DGRT.FPKRG QTCVVHYTGM LEDGKKFDSS RDRNKPFKFM 
REMARK              51                                                 100
REMARK      T0038   QNGAPYGTVL DTSPALTSEP RQVTETFTAS ATYPATPAAD DPEGQIAFQL 
REMARK      1fkb-0  LGKQEV..IR GWEEGVAQMS VGQRAKLTIS PDYAYGATGH PGIIPPHATL 
REMARK              101          112
REMARK      T0038   GGFSADAWTL CL
REMARK      1fkb-0  .VFDVELLKL E.
TALIGN T0038 0   32   43 1FKB - 0       3      14     0.40   2 
TALIGN T0038 0   45   85 1FKB - 0      15      55     0.40   2 
TALIGN T0038 0   88  129 1FKB - 0      56      97     0.40   2 
TALIGN T0038 0  131  140 1FKB - 0      98     107     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 151
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  151  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  151 Check: 100  Weight: 1.00
REMARK Name:          1i1b-0 Len:  151 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   .....LCVAV PAGSA..... QYGVGVVL.N G........V AIEEG..... 
REMARK      1i1b-0  VRSLNCTLRD SQQKSLVMSG PYELKALHLQ GQDMEQQVVF SMSFVQGEES 
REMARK              51                                                 100
REMARK      T0038   TTYTLRYTAT ASTDVTVRAL VGQNG.APYG TVLDTSPALT SE.P.RQVTE 
REMARK      1i1b-0  NDKIPVALGL KEKNLYLSCV LKDDKPTLQL ESVDPKNYPK KKMEKRFVFN 
REMARK              101                                                150
REMARK      T0038   TFTASA.... ...TYPA.TP AADDPEGQIA FQLGGFSADA ....WTLCL. 
REMARK      1i1b-0  KIEINNKLEF ESAQFPNWYI STSQAENMPV FLGGTKGGQD ITDFTMQFVS 
REMARK              151151
REMARK      T0038   .
REMARK      1i1b-0  S
TALIGN T0038 0   32   41 1I1B - 0       8      17     0.60   1 
TALIGN T0038 0   42   49 1I1B - 0      23      30     0.60   1 
TALIGN T0038 0   50   51 1I1B - 0      32      33     0.60   1 
TALIGN T0038 0   52   57 1I1B - 0      42      47     0.60   1 
TALIGN T0038 0   58   82 1I1B - 0      53      77     0.60   1 
TALIGN T0038 0   83   98 1I1B - 0      79      94     0.60   1 
TALIGN T0038 0   99   99 1I1B - 0      96      96     0.60   1 
TALIGN T0038 0  100  110 1I1B - 0      98     108     0.60   1 
TALIGN T0038 0  111  114 1I1B - 0     116     119     0.60   1 
TALIGN T0038 0  115  136 1I1B - 0     121     142     0.60   1 
TALIGN T0038 0  137  141 1I1B - 0     147     151     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 151
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  151  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  151 Check: 100  Weight: 1.00
REMARK Name:          1i1b-0 Len:  151 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ....LCVAVP AGS....... AQYGVGVV.L N......... GVAIEE..GT 
REMARK      1i1b-0  VRSLNCTLRD SQQKSLVMSG PYELKALHLQ GQDMEQQVVF SMSFVQGEES 
REMARK              51                                                 100
REMARK      T0038   TYTLRYTATA STDVTVRALV GQNGAPYGTV LDTSPALTSE PRQV...... 
REMARK      1i1b-0  NDKIPVALGL KEKNLYLSCV LKDDKPTLQL ESVDPKNYPK KKMEKRFVFN 
REMARK              101                                                150
REMARK      T0038   ......TETF TASATYP.AT PAADDPEGQI AFQLGGFSAD ....AWTLC. 
REMARK      1i1b-0  KIEINNKLEF ESAQFPNWYI STSQAENMPV FLGGTKGGQD ITDFTMQFVS 
REMARK              151151
REMARK      T0038   L
REMARK      1i1b-0  S
TALIGN T0038 0   32   40 1I1B - 0       7      15     0.40   2 
TALIGN T0038 0   41   48 1I1B - 0      23      30     0.40   2 
TALIGN T0038 0   49   50 1I1B - 0      32      33     0.40   2 
TALIGN T0038 0   51   56 1I1B - 0      43      48     0.40   2 
TALIGN T0038 0   57  102 1I1B - 0      51      96     0.40   2 
TALIGN T0038 0  103  113 1I1B - 0     109     119     0.40   2 
TALIGN T0038 0  114  135 1I1B - 0     121     142     0.40   2 
TALIGN T0038 0  136  140 1I1B - 0     147     151     0.40   2 
TALIGN T0038 0  141  141 1I1B - 0     153     153     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 111
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  111  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  111 Check: 100  Weight: 1.00
REMARK Name:          1msaA0 Len:  111 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   LCVAVPAGSA QYGVGVVLNG VAIEEGTTYT LRYTATASTD VTVRALVGQN 
REMARK      1msaA0  DNILYSGETL STGEFLNYGS FVFIMQED.C NLVLYDVDKP IWATNTGGLS 
REMARK              51                                                 100
REMARK      T0038   GAPYGTVLDT S.PALTSEPR QVTETFTASA TYPATPAADD PEGQIAFQLG 
REMARK      1msaA0  RSCFLSMQTD GNLVVYNPSN KPIWASNTGG QNGNYVCILQ KDRNVVIYGT 
REMARK              101         111
REMARK      T0038   GFSADAWTLC L
REMARK      1msaA0  DRWATG.THT G
TALIGN T0038 0   32   59 1MSA A 0       1      28     0.60   1 
TALIGN T0038 0   61   92 1MSA A 0      29      60     0.60   1 
TALIGN T0038 0   93  136 1MSA A 0      62     105     0.60   1 
TALIGN T0038 0  138  141 1MSA A 0     106     109     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 120
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  120  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  120 Check: 100  Weight: 1.00
REMARK Name:          1msaA0 Len:  120 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   L.CVAVPAGS AQYGVGVVLN GVAIEEGTTY TLRYTATAST DVTVRALVGQ 
REMARK      1msaA0  DNILYSGETL STGEFLNYGS FVFIMQEDCN LVLYDV.... D...KPIWAT 
REMARK              51                                                 100
REMARK      T0038   NGAPYGTVLD TSPALTSEPR QVTETFTASA TYPATPAADD PEGQIAFQLG 
REMARK      1msaA0  NTGGLS..RS CFLSMQTDGN .L.VVYNPSN KPIWASNTGG QNGNYVCILQ 
REMARK              101                  120
REMARK      T0038   GFSADAWTLC .........L 
REMARK      1msaA0  KDRNVVIYGT DRWATGTHTG 
TALIGN T0038 0   32   32 1MSA A 0       1       1     0.40   2 
TALIGN T0038 0   33   66 1MSA A 0       3      36     0.40   2 
TALIGN T0038 0   71   71 1MSA A 0      37      37     0.40   2 
TALIGN T0038 0   75   86 1MSA A 0      38      49     0.40   2 
TALIGN T0038 0   89  100 1MSA A 0      50      61     0.40   2 
TALIGN T0038 0  102  102 1MSA A 0      62      62     0.40   2 
TALIGN T0038 0  104  140 1MSA A 0      63      99     0.40   2 
TALIGN T0038 0  141  141 1MSA A 0     109     109     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 132
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  132  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  132 Check: 100  Weight: 1.00
REMARK Name:          1sltB0 Len:  132 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ..LCVAVPAG SAQ.YGVGVV LNG....VAI EEGTTY.TLR YTATASTDVT 
REMARK      1sltB0  GLVASNLNLK PGECLRVRGE VAADAKSFLL NLGKDDNNLC LHFNPRFNAH 
REMARK              51                                                 100
REMARK      T0038   ..VRALVGQN GAPYGTVLD. TSPALTSEPR Q.VTETFTAS ATYPATPAAD 
REMARK      1sltB0  GDVNTIVCNS KDAGAWGAEQ RESAFPFQPG SVVEVCISFN QTDLTIKLPD 
REMARK              101                              132
REMARK      T0038   DPEGQIAFQL G..GF..... ...SADAWTL CL
REMARK      1sltB0  GYEFKFPNRL NLEAINYLSA GGDFKIKCVA FE
TALIGN T0038 0   32   42 1SLT B 0       5      15     0.60   1 
TALIGN T0038 0   43   51 1SLT B 0      17      25     0.60   1 
TALIGN T0038 0   52   60 1SLT B 0      30      38     0.60   1 
TALIGN T0038 0   61   73 1SLT B 0      40      52     0.60   1 
TALIGN T0038 0   74   90 1SLT B 0      55      71     0.60   1 
TALIGN T0038 0   91  101 1SLT B 0      73      83     0.60   1 
TALIGN T0038 0  102  130 1SLT B 0      85     113     0.60   1 
TALIGN T0038 0  131  132 1SLT B 0     116     117     0.60   1 
TALIGN T0038 0  133  141 1SLT B 0     126     134     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 133
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  133  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  133 Check: 100  Weight: 1.00
REMARK Name:          1sltB0 Len:  133 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ....LCVAVP AGS.AQYGVG VV.....LNG VAIEEGTTYT LRYTATASTD 
REMARK      1sltB0  GLVASNLNLK PGECLRVRGE VAADAKSFLL NLGKDDNNLC LHFNPRFNAH 
REMARK              51                                                 100
REMARK      T0038   ..VTVRALVG QNGAPYGTV. LDTSPALTSE P.RQVTETFT ...ASATYPA 
REMARK      1sltB0  GDVNTIVCNS KDAGAWGAEQ RESAFPFQPG SVVEVCISFN QTDLTIKLPD 
REMARK              101                               133
REMARK      T0038   TP......AA DDPEGQIAFQ LGGFSADAWT LCL
REMARK      1sltB0  GYEFKFPNRL NLEAINYLSA GGDFKIKCVA FE.
TALIGN T0038 0   32   40 1SLT B 0       7      15     0.40   2 
TALIGN T0038 0   41   48 1SLT B 0      17      24     0.40   2 
TALIGN T0038 0   49   71 1SLT B 0      30      52     0.40   2 
TALIGN T0038 0   72   88 1SLT B 0      55      71     0.40   2 
TALIGN T0038 0   89   99 1SLT B 0      73      83     0.40   2 
TALIGN T0038 0  100  107 1SLT B 0      85      92     0.40   2 
TALIGN T0038 0  108  116 1SLT B 0      96     104     0.40   2 
TALIGN T0038 0  117  140 1SLT B 0     111     134     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 111
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  111  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  111 Check: 100  Weight: 1.00
REMARK Name:          1tlk-0 Len:  111 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   LCVAVPAGSA .QYGVGVVLN GVAIEEGTTY TLRYTATAST DVTVRALVGQ 
REMARK      1tlk-0  V...AEEKPH VKPYFTKTIL DMDVVEGSAA RFDCKVEGYP DPEVMWFKDD 
REMARK              51                                                 100
REMARK      T0038   NGAPYGTVLD TSPALTSEPR QVTETFTASA TYPATPAADD PEGQIAFQLG 
REMARK      1tlk-0  NPVKES..RH FQIDYDEEGN .CSLTIS.EV C.GDDDAKYT CKAVNSLGEA 
REMARK              101         111
REMARK      T0038   GFSADAWTLC L
REMARK      1tlk-0  TCTAELLVET M
TALIGN T0038 0   32   32 1TLK - 0      33      33     0.60   1 
TALIGN T0038 0   36   41 1TLK - 0      34      39     0.60   1 
TALIGN T0038 0   42   86 1TLK - 0      41      85     0.60   1 
TALIGN T0038 0   89  100 1TLK - 0      86      97     0.60   1 
TALIGN T0038 0  102  107 1TLK - 0      98     103     0.60   1 
TALIGN T0038 0  109  111 1TLK - 0     104     106     0.60   1 
TALIGN T0038 0  113  141 1TLK - 0     107     135     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 111
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  111  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  111 Check: 100  Weight: 1.00
REMARK Name:          1tlk-0 Len:  111 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   LCVAVPAGSA QYGVGVVLNG VAIEEGTTYT LRYTATASTD VTVRALVGQN 
REMARK      1tlk-0  ....VAEEKP HVKPYFTKTI LDMDVVEGSA ARFDCKVEGY PDPEVMWFKD 
REMARK              51                                                 100
REMARK      T0038   GAPYGTVLDT SPALTSEPRQ VTETFTASAT YPATPAADDP EGQIAFQLGG 
REMARK      1tlk-0  DNPVK...ES RHFQIDYDEE GNCSLTIS.E VCGDDDAKYT CKAVNSLGEA 
REMARK              101         111
REMARK      T0038   FSADAWTLCL .
REMARK      1tlk-0  TCTAELLVET M
TALIGN T0038 0   36   86 1TLK - 0      33      83     0.40   2 
TALIGN T0038 0   90  109 1TLK - 0      84     103     0.40   2 
TALIGN T0038 0  111  141 1TLK - 0     104     134     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 153
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  153  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  153 Check: 100  Weight: 1.00
REMARK Name:          1tnfA0 Len:  153 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ........LC VAVPAGSA.. .......... ....QYGVG. ..VVLNGVAI 
REMARK      1tnfA0  RTPSDKPVAH VVANPQAEGQ LQWLNRRANA LLANGVELRD NQLVVPSEGL 
REMARK              51                                                 100
REMARK      T0038   EEGTTYTLRY TATASTD.VT VRALVGQNG. ..APYGTVLD T...SPALTS 
REMARK      1tnfA0  YLIYSQVLFK GQGCPSTHVL LTHTISRIAV SYQTKVNLLS AIKSPCQRET 
REMARK              101                                                150
REMARK      T0038   EPRQVTETFT ASATYPATPA ADDPEGQIAF QLGG...... FSAD...AWT 
REMARK      1tnfA0  PEGAEAKPWY EPIYLGGVFQ LEKGD.RLSA EINRPDYLLF AESGQVYFGI 
REMARK              151 153
REMARK      T0038   LCL
REMARK      1tnfA0  IAL
TALIGN T0038 0   32   41 1TNF A 0      14      23     0.60   1 
TALIGN T0038 0   42   46 1TNF A 0      40      44     0.60   1 
TALIGN T0038 0   47   71 1TNF A 0      48      72     0.60   1 
TALIGN T0038 0   72   82 1TNF A 0      74      84     0.60   1 
TALIGN T0038 0   83   91 1TNF A 0      88      96     0.60   1 
TALIGN T0038 0   92  122 1TNF A 0     100     130     0.60   1 
TALIGN T0038 0  124  131 1TNF A 0     131     138     0.60   1 
TALIGN T0038 0  132  135 1TNF A 0     145     148     0.60   1 
TALIGN T0038 0  136  141 1TNF A 0     152     157     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 152
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  152  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  152 Check: 100  Weight: 1.00
REMARK Name:          1tnfA0 Len:  152 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   .......LCV AVPAGSAQ.. .......... ...YGVGVVL NGVAI....E 
REMARK      1tnfA0  RTPSDKPVAH VVANPQAEGQ LQWLNRRANA LLANGVELRD NQLVVPSEGL 
REMARK              51                                                 100
REMARK      T0038   EGTTYTLRYT ATASTDV... TVRALVGQN. ..GAPYGTVL D...TSPALT 
REMARK      1tnfA0  YLIYSQVLFK GQGCPSTHVL LTHTISRIAV SYQTKVNLLS AIKSPCQRET 
REMARK              101                                                150
REMARK      T0038   SEPRQVTETF TASATYPATP AADDPEGQIA FQL......G GFS.ADAWTL 
REMARK      1tnfA0  PEGAEAKPWY EPIYLGGVFQ LEKGDRLSAE INRPDYLLFA ESGQVYFGII 
REMARK              151152
REMARK      T0038   CL
REMARK      1tnfA0  AL
TALIGN T0038 0   32   42 1TNF A 0      13      23     0.40   2 
TALIGN T0038 0   43   54 1TNF A 0      39      50     0.40   2 
TALIGN T0038 0   55   72 1TNF A 0      55      72     0.40   2 
TALIGN T0038 0   73   81 1TNF A 0      76      84     0.40   2 
TALIGN T0038 0   82   90 1TNF A 0      88      96     0.40   2 
TALIGN T0038 0   91  129 1TNF A 0     100     138     0.40   2 
TALIGN T0038 0  130  133 1TNF A 0     145     148     0.40   2 
TALIGN T0038 0  134  141 1TNF A 0     150     157     0.40   2 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 114
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  114  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  114 Check: 100  Weight: 1.00
REMARK Name:          2mcm-0 Len:  114 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   L..CVAVPAG SAQYGVGVVL NGVAIEEGTT YTLRYTATAS TDVTVRALVG 
REMARK      2mcm-0  APGVTVTPAT GLSNGQTVTV SATGLTPGTV YHVGQCAVVE PG..VIGCDA 
REMARK              51                                                 100
REMARK      T0038   QNGAPYGTVL DTSPALTSEP R.QVTETFTA SATYPATPAA DDPEGQIAFQ 
REMARK      2mcm-0  TTSTDVTADA AGKITAQLKV HSSFQAVVGA DGTPWGTVNC KVVSCSAGLG 
REMARK              101            114
REMARK      T0038   LGGFS.ADAW TLCL
REMARK      2mcm-0  SDSGEGAAQA ITFA
TALIGN T0038 0   32   32 2MCM - 0       1       1     0.60   1 
TALIGN T0038 0   33   71 2MCM - 0       4      42     0.60   1 
TALIGN T0038 0   74  100 2MCM - 0      43      69     0.60   1 
TALIGN T0038 0  101  133 2MCM - 0      71     103     0.60   1 
TALIGN T0038 0  134  141 2MCM - 0     105     112     0.60   1 
REMARK BLC2MSF.  R.B. Russell 1995
REMARK Alignment read in,    4 sequences, length is 118
REMARK MSF of bloc file read from standard input 
REMARK bloc2.msf MSF:  118  Type: P today Check: 100 ..
REMARK Name:          T0038  Len:  118 Check: 100  Weight: 1.00
REMARK Name:          2mcm-0 Len:  118 Check: 100  Weight: 1.00
REMARK //
REMARK              1                                                   50
REMARK      T0038   ...LCVAVPA G.SAQYGVGV VLNGVAIEEG TTYTLRYTAT ASTDVTVRAL 
REMARK      2mcm-0  APGVTVTPAT GLSNGQTVTV SATGL...TP GTVYHVGQCA VVEPG..VIG 
REMARK              51                                                 100
REMARK      T0038   VGQNGAPYGT VLDTSPALTS EPRQV.TETF TASATYPATP AADDPEG.QI 
REMARK      2mcm-0  CDATTSTDVT A.DAAGKITA QLKVHSSFQA VVGADGTPWG TVNCKVVSCS 
REMARK              101                118
REMARK      T0038   AFQLGGFSA. DAWTLCL.
REMARK      2mcm-0  AGLGSDSGEG AAQAITFA
TALIGN T0038 0   32   39 2MCM - 0       4      11     0.40   2 
TALIGN T0038 0   40   52 2MCM - 0      13      25     0.40   2 
TALIGN T0038 0   56   72 2MCM - 0      26      42     0.40   2 
TALIGN T0038 0   75   88 2MCM - 0      43      56     0.40   2 
TALIGN T0038 0   90  102 2MCM - 0      57      69     0.40   2 
TALIGN T0038 0  103  123 2MCM - 0      71      91     0.40   2 
TALIGN T0038 0  124  134 2MCM - 0      93     103     0.40   2 
TALIGN T0038 0  135  141 2MCM - 0     105     111     0.40   2 



