
PFRMAT AL
TARGET T0086
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 2cam_B
R 12 R 2
Y 13 E 3
C 14 C 4
K 15 S 5
E 16 L 6
I 17 T 7
P 18 G 8
A 19 E 9
L 20 W 10
D 21 T 11
P 22 N 12
Q 23 D 13
L 24 L 14
E 31 G 15
D 32 S 16
S 33 N 17
M 34 M 18
T 35 T 19
K 36 I 20
R 37 G 21
F 38 A 22
E 39 V 23
Q 40 N 24
Q 41 S 25
G 42 D 26
K 43 G 27
T 44 E 28
V 45 F 29
S 46 T 30
V 47 G 31
T 48 T 32
M 49 Y 33
I 50 I 34
R 51 T 35
E 52 A 36
G 53 V 37
F 54 T 38
V 55 A 39
E 56 T 40
Q 57 S 41
N 58 N 42
E 59 E 43
I 60 I 44
E 62 K 45
E 63 E 46
L 64 S 47
P 65 P 48
L 66 L 49
L 67 H 50
P 68 G 51
K 69 T 52
E 70 E 53
S 71 N 54
R 72 T 55
Y 73 I 56
W 74 N 57
L 75 K 58
R 76 R 59
E 77 T 60
I 78 Q 61
L 79 P 62
L 80 T 63
C 81 F 64
A 82 G 65
D 83 F 66
G 84 T 67
E 85 V 68
P 86 N 69
W 87 W 70
L 88 K 71
A 89 F 72
G 90 S 73
R 91 E 74
T 92 T 77
V 93 V 78
V 94 F 79
P 95 T 80
V 96 F 84
S 97 I 85
T 98 D 86
L 99 R 87
S 100 N 88
G 101 G 89
P 102 K 90
E 103 E 91
L 104 V 92
A 105 L 93
L 106 L 98
Q 107 L 99
K 108 R 100
L 109 S 101
G 110 S 102
K 111 V 103
T 112 N 104
P 113 D 105
L 114 I 106
G 115 G 107
R 116 A 112
Y 117 T 113
L 118 R 114
F 119 V 115
T 120 G 116
S 121 I 117
S 122 N 118
T 123 I 119
L 124 F 120
T 125 T 121
R 126 R 122
TER
END

