
PFRMAT AL
TARGET T0088
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  3
PARENT 1A12_C
REMARK DATE	1999-02-16
REMARK SCORE	 3.0	25.4	16/46 (34%)
L 62 L 344
P 63 P 345
V 64 A 346
V 65 V 347
G 66 S 348
S 67 S 349
L 68 V 350
D 69 A 351
G 70 G 353
Q 71 A 354
S 72 S 355
I 73 V 356
Y 74 Y 358
G 75 A 359
L 76 V 360
T 77 T 361
E 78 K 362
E 79 D 363
V 80 G 364
G 81 R 365
L 82 V 366
L 83 F 367
I 84 A 368
W 85 W 369
M 86 G 370
G 87 M 371
D 88 G 372
T 89 T 373
N 90 N 374
Y 91 Y 375
S 92 Q 376
R 93 L 377
G 94 G 378
T 95 T 379
A 96 G 380
M 97 Q 381
S 98 D 382
G 99 E 383
N 100 D 384
S 101 A 385
W 102 W 386
E 103 S 387
N 104 P 388
V 105 V 389
TER
END

