
PFRMAT AL
TARGET T0088
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 1ENF_A
REMARK DATE	2000-04-19
REMARK SCORE	?
A 1 A 13
V 2 L 14
S 3 A 15
F 4 N 16
I 5 A 17
G 6 Y 18
S 7 G 19
T 8 Q 20
E 9 Y 21
N 10 N 22
D 11 H 23
V 12 P 24
G 13 F 25
P 14 I 26
S 15 K 27
Q 16 E 28
G 17 N 29
S 18 I 30
Y 19 K 31
S 20 S 32
S 21 D 33
T 22 E 34
H 23 I 35
A 24 E 38
M 25 K 39
D 26 D 40
N 27 L 41
L 28 I 42
P 29 F 43
F 30 R 44
V 31 N 45
Y 32 Q 46
N 33 G 47
T 34 D 48
G 35 S 49
Y 36 G 50
N 37 N 51
I 38 D 52
G 39 L 53
Y 40 R 54
Q 41 V 55
N 42 K 56
A 43 F 57
N 44 A 58
V 45 T 59
W 46 A 60
R 47 D 61
I 48 L 62
S 49 A 63
G 50 Q 64
G 51 K 65
F 52 F 66
C 53 N 68
V 54 K 69
G 55 N 70
L 56 V 71
D 57 D 72
G 58 I 73
K 59 Y 74
V 60 G 75
D 61 A 76
L 62 S 77
P 63 F 78
V 64 Y 79
V 65 Y 80
G 66 K 81
S 67 C 82
L 68 E 83
D 69 K 84
G 70 I 85
Q 71 S 86
S 72 E 87
I 73 N 88
Y 74 I 89
G 75 S 90
L 76 E 91
T 77 C 92
E 78 L 93
E 79 Y 94
V 80 G 95
G 81 G 96
L 82 T 97
L 83 T 98
I 84 L 99
W 85 N 100
M 86 S 101
G 87 E 102
D 88 K 103
T 89 L 104
N 90 A 105
Y 91 Q 106
S 92 E 107
R 93 R 108
G 94 V 109
T 95 I 110
A 96 G 111
M 97 A 112
S 98 N 113
N 100 W 115
S 101 V 116
W 102 D 117
E 103 G 118
N 104 E 124
V 105 L 125
F 106 I 126
S 107 R 127
G 108 T 128
W 109 N 129
C 110 K 130
V 111 K 131
G 112 N 132
N 113 V 133
Y 114 T 134
V 115 L 135
S 116 Q 136
T 117 E 137
Q 118 L 138
G 119 D 139
L 120 I 140
S 121 K 141
V 122 I 142
H 123 K 155
V 124 D 156
R 125 S 157
P 126 E 158
V 127 I 159
I 128 S 160
L 129 K 161
K 130 G 162
R 131 L 163
N 132 I 164
S 133 E 165
S 134 F 166
A 135 D 167
Q 136 M 168
Y 137 K 169
S 138 T 170
V 139 P 171
Q 140 R 172
K 141 D 173
TER
END

