
PFRMAT AL
TARGET T0089
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.46 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1bu6o1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1bu6_O
T   7     K     3 
V   8     K     4 
F   9     Y     5 
Y  10     I     6 
T  11     V     7 
S  12     A     8 
I  13     L     9 
D  14     D    10 
I  15     Q    11 
G  16     G    12 
S  17     T    13 
R  18     T    14 
Y  19     S    15 
I  20     S    16 
K  21     R    17 
G  22     A    18 
L  23     V    19 
V  24     V    20 
L  25     M    21 
A  36     A    25 
F  37     N    26 
S  38     I    27 
S  39     I    28 
V  40     S    29 
K  41     V    30 
S  42     S    31 
R  43     Y    39 
G  44     P    40 
L  45     K    41 
D  46     P    42 
E  47     G    43 
G  48     W    44 
E  49     V    45 
I  50     E    46 
K  51     H    47 
D  52     D    48 
A  53     P    49 
I  54     M    50 
A  55     E    51 
F  56     I    52 
K  57     W    53 
E  58     A    54 
S  59     T    55 
V  60     Q    56 
N  61     S    57 
T  62     S    58 
L  63     T    59 
L  64     L    60 
K  65     V    61 
E  66     E    62 
L  67     V    63 
E  68     L    64 
E  69     T    65 
Q  70     K    66 
L  71     A    67 
Q  72     D    68 
K  73     I    69 
S  74     S    70 
K 103     S    71 
R 104     D    72 
S 105     Q    73 
I 106     I    74 
T 107     A    75 
L 108     A    76 
D 109     I    77 
I 110     G    78 
L 111     I    79 
S 112     T    80 
E 113     N    81 
M 114     Q    82 
Q 115     R    83 
S 116     E    84 
T 161     T    85 
S 162     T    86 
I 163     I    87 
V 164     V    88 
V 165     W    89 
P 166     E    90 
L 167     K    91 
K 168     E    92 
V 169     T    93 
M 238     G    94 
K 239     K    95 
H 240     P    96 
V 241     I    97 
I 242     Y    98 
K 243     N    99 
D 244     A   100 
V 245     I   101 
S 246     V   102 
A 247     W   103 
V 248     Q   104 
L 249     C   105 
D 250     R   106 
T 251     R   107 
S 252     T   108 
F 253     A   109 
E 254     E   110 
E 255     I   111 
S 256     C   112 
E 257     E   113 
R 258     H   114 
L 259     L   115 
I 260     K   116 
I 261     R   117 
T 262     D   118 
H 263     G   119 
G 264     L   120 
N 265     E   121 
A 266     D   122 
V 267     Y   123 
Y 268     I   124 
N 269     R   125 
D 270     S   126 
L 271     N   127 
K 272     T   128 
E 273     G   129 
E 274     L   130 
E 275     V   131 
I 276     I   132 
Q 277     D   133 
Y 278     P   134 
R 279     Y   135 
G 280     F   136 
I 298     S   137 
H 299     G   138 
A 300     T   139 
R 301     K   140 
L 302     V   141 
R 303     K   142 
E 304     W   143 
I 305     I   144 
M 306     L   145 
S 307     D   146 
K 308     H   147 
S 309     V   148 
K 310     E   149 
K 311     G   150 
F 312     S   151 
F 313     R   152 
R 314     E   153 
E 315     R   154 
V 316     A   155 
E 317     R   156 
A 318     R   157 
K 319     G   158 
I 320     E   159 
L 334     L   160 
T 335     L   161 
G 336     F   162 
G 337     G   163 
G 338     T   164 
A 339     V   165 
K 340     D   166 
I 341     T   167 
P 342     W   168 
R 343     L   169 
I 344     I   170 
N 345     W   171 
E 346     K   172 
L 347     M   173 
A 348     T   174 
T 349     Q   175 
S 354     G   176 
P 355     R   177 
V 356     V   178 
R 357     H   179 
T 358     V   180 
G 359     T   181 
C 360     D   182 
Y 361     Y   183 
A 362     T   184 
N 363     N   185 
S 364     A   186 
D 365     S   187 
R 366     R   188 
P 367     T   189 
S 368     M   190 
I 369     L   191 
I 370     F   192 
N 371     N   193 
A 372     I   194 
D 373     H   195 
E 374     T   196 
V 375     L   197 
A 376     D   198 
N 377     W   199 
D 378     D   200 
P 379     D   201 
S 380     K   202 
F 381     M   203 
A 382     L   204 
A 383     E   205 
A 384     V   206 
F 385     L   207 
G 386     E   212 
N 387     M   213 
V 388     L   214 
F 389     P   215 
A 390     E   216 
V 391     V   217 
S 392     R   218 
E 393     R   219 
N 394     S   220 
P 395     S   221 
Y 396     Y   224 
E 397     G   225 
E 398     Q   226 
T 399     T   227 
P 400     N   228 
V 401     I   229 
K 402     G   230 
S 403     G   231 
E 404     K   232 
N 405     G   233 
P 406     G   234 
L 407     T   235 
K 408     R   236 
K 409     G   241 
I 410     I   242 
F 411     A   243 
R 412     G   244 
L 413     D   245 
F 414     Q   246 
K 415     Q   247 
E 416     A   248 
L 417     A   249 
M 418     L   250 
E 419     F   251 
TER
END

