
PFRMAT AL
TARGET T0091
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.23 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1by0a
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1by0_A
M  11     R     1 
K  12     K     2 
Q  13     K     3 
A  14     L     4 
Q  15     E     5 
Q  16     E     6 
M  17     L     7 
Q  18     E     8 
E  19     R     9 
K  20     D    10 
M  21     L    11 
Q  22     R    12 
K  23     K    13 
M  24     L    14 
Q  25     K    15 
E  26     K    16 
E  27     K    17 
I  28     I    18 
A  29     K    19 
Q  30     K    20 
L  31     L    21 
E  32     E    22 
V  33     E    23 
T  34     D    24 
G  35     N    25 
P 108     P    26 
F 109     W    27 
TER
END

