
PFRMAT AL
TARGET T0091
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1efu_B
K    4 A 1
G    5 E 2
G    6 I 3
L    7 T 4
G    8 A 5
G    9 S 6
L   10 L 7
M   11 V 8
K   12 K 9
Q   13 E 10
A   14 L 11
Q   15 R 12
Q   16 E 13
M   17 C 22
Q   18 K 23
E   19 K 24
K   20 A 25
M   21 L 26
Q   22 T 27
K   23 E 28
M   24 I 33
Q   25 E 34
E   26 L 35
E   27 A 36
I   28 I 37
A   29 E 38
Q   30 N 39
L   31 M 40
E   32 R 41
V   33 K 42
T   34 S 43
G   35 G 44
E   36 K 51
S   37 A 52
G   38 G 53
A   39 N 54
G   40 G 59
L   41 V 60
V   42 I 61
K   43 K 62
I   44 T 63
T   45 K 64
I   46 I 65
N   47 D 66
G   48 G 67
A   49 N 68
H   50 G 70
N   51 I 71
C   52 I 72
R   53 L 73
R   54 E 74
I   55 V 75
D   56 N 76
I   57 C 77
D   58 Q 78
P   59 T 79
S   60 D 80
L   61 F 81
M   62 V 82
E   63 A 83
D   64 K 84
D   65 D 85
K   66 A 86
E   67 Q 89
M   68 A 90
L   69 F 91
E   70 A 92
D   71 D 93
L   72 K 94
I   73 V 95
A   74 L 96
A   75 A 98
A   76 A 99
F   77 V 100
N   78 V 107
D   79 E 108
A   80 V 109
V   81 L 110
R   82 K 111
R   83 Q 113
A   84 F 114
E   85 E 115
E   86 E 116
L   87 E 117
Q   88 R 118
K   89 V 119
E   90 A 120
K   91 L 121
M   92 V 122
A   93 A 123
S   94 K 124
V   95 I 125
T   96 G 126
A   97 E 127
G   98 N 128
M   99 I 129
P  100 N 130
L  101 I 131
P  102 L 137
P  103 E 138
G  104 G 139
TER
END

