
PFRMAT AL
TARGET T0091
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1a36_A
M   11 E 641
K   12 K 642
Q   13 S 643
A   14 M 644
Q   15 M 645
Q   16 N 646
M   17 L 647
Q   18 Q 648
E   19 T 649
K   20 K 650
M   21 I 651
Q   22 D 652
K   23 A 653
M   24 K 654
Q   25 K 655
E   26 E 656
E   27 Q 657
I   28 L 658
A   29 A 659
Q   30 D 660
L   31 A 661
E   32 R 662
H   50 R 663
N   51 D 664
C   52 L 665
R   53 K 666
R   54 S 667
I   55 A 668
D   56 K 669
I   57 A 670
D   58 D 671
P   59 A 672
S   60 K 673
L   61 V 674
M   62 M 675
E   63 K 676
D   64 D 677
D   65 A 678
K   66 K 679
E   70 T 680
D   71 K 681
L   72 K 682
I   73 V 683
A   74 V 684
A   75 E 685
A   76 S 686
F   77 K 687
N   78 K 688
D   79 K 689
A   80 A 690
V   81 V 691
R   82 Q 692
R   83 R 693
A   84 L 694
E   85 E 695
E   86 E 696
L   87 L 698
Q   88 M 699
K   89 K 700
E   90 L 701
K   91 E 702
M   92 V 703
A   93 Q 704
S   94 A 705
V   95 T 706
T   96 D 707
A   97 R 708
G   98 E 709
M   99 E 710
P  100 N 711
L  101 K 712
TER
END

