
PFRMAT AL
TARGET T0093
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.29 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2tpsa
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 2tps_A
M   1     S    27
L   2     V    28
D   3     Y    29
I   4     F    30
V   5     I    31
L   6     M    32
Y   7     G    33
E   8     S    34
P   9     N    35
E  10     N    36
I  11     T    37
P  12     K    38
Q  13     A    39
N  14     D    40
T  15     P    41
G  16     V    42
N  17     T    43
I  18     V    44
I  19     V    45
R  20     Q    46
L  21     K    47
C  22     A    48
A  23     L    49
N  24     K    50
T  25     G    51
G  26     G    52
F  27     A    53
R  28     T    54
L  29     L    55
H  30     Y    56
L  31     Q    57
I  32     F    58
E  33     R    59
P  34     E    60
L  35     K    61
G  36     G    62
F  37     G    63
T  38     D    64
W  39     A    65
D  40     L    66
D  41     E    69
K  42     A    70
R  43     R    71
L  44     I    72
R  45     K    73
R  46     F    74
S  47     A    75
G  48     E    76
L  49     K    77
D  50     A    78
Y  51     Q    79
H  52     A    80
E  53     A    81
F  54     C    82
A  55     R    83
E  56     E    84
I  57     I   108
K  58     G   109
R  59     Q   110
H  60     E   111
K  61     D   112
T  62     A   113
F  63     N   114
E  64     A   115
A  65     K   116
F  66     E   117
L  67     V   118
E  68     R   119
S  69     A   120
E  70     A   121
K  71     I   122
P  72     G   123
K  73     D   124
R  74     M   125
L  75     I   126
F  76     L   127
A  77     G   128
L  78     V   129
T  79     S   130
T  80     A   131
K  81     H   132
G  82     T   133
C  83     M   134
P  84     S   135
A  85     E   136
H  86     V   137
S  87     K   138
Q  88     Q   139
V  89     A   140
K  90     E   141
F  91     E   142
K  92     D   143
L  93     G   144
G  94     A   145
D  95     D   146
Y  96     Y   147
L  97     V   148
M  98     G   149
F  99     L   150
G 100     G   151
P 101     P   152
E 102     D   161
T 103     T   162
R 104     R   163
G 105     A   164
I 106     V   165
P 107     Q   166
M 108     G   167
S 109     V   168
I 110     S   169
L 111     L   170
N 112     I   171
E 113     E   172
M 114     A   173
P 115     V   174
M 116     R   175
E 117     R   176
Q 118     Q   177
K 119     G   178
I 120     I   179
R 121     S   180
I 122     I   181
P 123     P   182
M 124     I   183
T 125     V   184
A 126     G   185
N 127     G   201
S 128     A   202
R 129     D   203
S 130     G   204
M 131     V   205
N 132     S   206
L 133     M   207
S 134     I   208
N 135     S   209
S 136     A   210
V 137     I   211
A 138     S   212
V 139     Q   213
T 140     A   214
V 141     E   215
Y 142     D   216
E 143     P   217
A 144     E   218
W 145     S   219
R 146     A   220
Q 147     A   221
L 148     R   222
G 149     K   223
Y 150     F   224
K 151     R   225
G 152     E   226
A 153     E   227
V 154     I   228
N 155     Q   229
L 156     T   230
P 157     Y   231
E 158     K   232
V 159     T   233
K 160     G   234
TER
END

