
PFRMAT AL
TARGET T0093
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1a2o_A
F   27 M 1
R   28 S 2
L   29 K 3
H   30 I 4
L   31 R 5
I   32 V 6
F   37 L 7
T   38 S 8
W   39 V 9
D   40 D 10
D   41 D 11
K   42 S 12
R   43 A 13
L   44 L 14
R   45 M 15
R   46 R 16
S   47 Q 17
G   48 I 18
L   49 M 19
D   50 S 25
Y   51 H 26
H   52 S 27
E   53 D 28
F   54 M 29
A   55 E 30
E   56 M 31
I   57 V 32
K   58 A 33
R   59 T 34
H   60 A 35
K   61 P 36
T   62 D 37
F   63 A 41
E   64 R 42
A   65 D 43
F   66 L 44
L   67 I 45
E   68 K 46
S   69 K 47
E   70 F 48
K   71 N 49
P   72 P 50
K   73 D 51
F   76 V 52
A   77 L 53
L   78 T 54
T   79 L 55
T   80 D 56
K   81 V 57
G   82 E 58
C   83 M 59
P   84 P 60
A   85 R 61
H   86 M 62
S   87 D 63
Q   88 G 64
V   89 L 65
K   90 D 66
F   91 F 67
K   92 P 76
L   93 M 77
G   94 P 78
D   95 V 79
Y   96 V 80
L   97 M 81
M   98 V 82
F   99 S 83
G  100 S 84
P  101 L 85
E  102 T 86
T  103 G 87
R  104 K 88
G  105 G 89
I  106 V 92
P  107 T 93
M  108 L 94
S  109 R 95
I  110 A 96
L  111 L 97
N  112 E 98
E  113 L 99
M  114 G 100
P  115 A 101
M  116 I 102
E  117 D 103
Q  118 F 104
I  120 V 105
R  121 T 106
I  122 K 107
P  123 P 108
M  124 Q 109
T  125 L 110
A  126 G 111
N  127 I 112
S  128 R 113
R  129 E 114
S  130 G 115
M  131 M 116
L  133 L 117
S  134 A 118
N  135 Y 119
S  136 S 120
V  137 E 121
A  138 M 122
V  139 I 123
T  140 A 124
V  141 V 127
Y  142 R 128
E  143 T 129
A  144 A 130
W  145 A 131
R  146 R 132
Q  147 A 133
L  148 R 134
G  149 H 138
Y  150 K 139
K  151 P 140
TER
END

