
PFRMAT AL
TARGET T0093
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1ble
L    2 M 2
D    3 N 3
I    4 I 4
V    5 V 5
L    6 L 6
Y    7 A 7
E    8 R 8
P    9 I 9
E   10 D 10
I   11 D 11
P   12 R 12
Q   13 F 13
N   14 I 14
T   15 H 15
G   16 G 16
N   17 Q 17
I   18 I 18
I   19 L 19
R   20 R 21
L   21 W 22
C   22 I 23
A   23 K 24
N   24 V 25
T   25 H 26
G   26 A 27
F   27 A 28
R   28 D 29
L   29 R 30
H   30 I 31
L   31 I 32
I   32 V 33
E   33 V 34
P   34 S 35
L   35 D 36
F   37 D 37
T   38 I 38
W   39 A 39
D   40 Q 40
D   41 D 41
K   42 E 42
R   43 M 43
L   44 R 44
R   45 K 45
R   46 T 46
S   47 L 47
G   48 I 48
L   49 L 49
D   50 S 50
Y   51 V 51
H   52 A 52
E   53 P 53
F   54 K 57
A   55 A 58
E   56 S 59
I   57 A 60
K   58 V 61
R   59 S 62
H   60 V 63
K   61 S 64
T   62 K 65
F   63 M 66
E   64 A 67
A   65 K 68
F   66 A 69
L   67 F 70
E   68 H 71
S   69 S 72
E   70 P 73
K   71 R 74
P   72 Y 75
K   73 E 76
R   74 G 77
L   75 V 78
F   76 T 79
A   77 A 80
L   78 M 81
T   79 L 82
T   80 L 83
K   81 S 88
G   82 D 89
C   83 I 90
P   84 V 91
A   85 S 92
H   86 L 93
S   87 I 94
Q   88 E 95
V   89 A 96
K   90 G 97
F   91 V 98
K   92 P 99
L   93 I 100
G   94 K 101
D   95 T 102
Y   96 V 103
L   97 N 104
M   98 V 105
F   99 G 106
G  100 G 107
P  101 T 118
E  102 K 119
T  103 S 120
R  104 V 121
G  105 S 122
I  106 V 123
P  107 T 124
M  108 E 125
S  109 Q 126
I  110 D 127
L  111 I 128
N  112 K 129
E  113 A 130
M  114 F 131
P  115 E 132
M  116 S 135
E  117 D 136
Q  118 V 139
K  119 K 140
I  120 L 141
R  121 E 142
I  122 L 143
P  123 R 144
M  124 Q 145
T  125 L 146
A  126 P 147
N  127 S 148
S  128 D 149
R  129 A 150
S  130 S 151
M  131 E 152
N  132 D 153
V  141 F 154
Y  142 V 155
E  143 Q 156
A  144 I 157
W  145 L 158
R  146 R 159
Q  147 N 160
L  148 V 161
G  149 T 162
TER
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