
PFRMAT AL
TARGET T0093
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1coz_A
M 1 M 1
L 2 K 2
D 3 K 3
I 4 V 4
V 5 I 5
L 6 T 6
Y 7 Y 7
E 8 G 8
P 9 T 9
E 10 F 10
I 11 D 11
P 12 L 12
Q 13 L 13
N 14 H 14
T 15 W 15
G 16 G 16
N 17 K 19
I 18 L 20
I 19 L 21
R 20 E 22
L 21 R 23
C 22 A 24
A 23 K 25
N 24 Q 26
T 25 L 27
G 26 G 28
F 27 D 29
R 28 Y 30
L 29 L 31
H 30 V 32
L 31 V 33
L 35 I 35
G 36 S 36
F 37 T 37
T 38 D 38
W 39 E 39
D 40 F 40
D 41 N 41
K 42 L 42
R 43 Q 43
L 44 K 44
R 45 Q 45
R 46 K 46
E 56 A 48
I 57 Y 49
K 58 H 50
R 59 S 51
H 60 Y 52
K 61 E 53
T 62 H 54
F 63 R 55
E 64 K 56
A 65 L 57
F 66 I 58
L 67 L 59
E 68 E 60
S 69 T 61
E 70 I 62
K 71 R 63
P 72 Y 64
K 73 V 65
R 74 D 66
L 75 E 67
F 76 V 68
A 77 I 69
L 78 P 70
T 79 E 71
T 80 K 72
K 81 N 73
G 82 W 74
C 83 E 75
P 84 Q 76
A 85 K 77
H 86 K 78
S 87 Q 79
Q 88 D 80
V 89 I 81
K 90 I 82
F 91 D 83
K 92 H 84
L 93 N 85
G 94 I 86
D 95 D 87
Y 96 V 88
L 97 F 89
M 98 V 90
F 99 M 91
G 100 G 92
P 101 D 93
E 102 D 94
T 103 W 95
R 104 E 96
G 105 G 97
I 106 K 98
P 107 F 99
M 108 D 100
S 109 F 101
I 110 L 102
L 111 K 103
N 112 D 104
E 113 Q 105
M 114 C 106
Q 118 E 107
K 119 V 108
I 120 V 109
R 121 Y 110
I 122 L 111
P 123 P 112
M 124 R 113
T 125 T 114
A 126 E 115
N 127 G 116
S 128 I 117
TER
END

