

PFRMAT AL
TARGET T0094
AUTHOR 9885-9936-6780
METHOD Smith-Waterman alignment of
METHOD secondary structure annotated
METHOD sequence.
MODEL 2
PARENT 1mld_A
E    2   D   64
E    3   C   65
V    4   L   66
K    5   K   67
K    6   G   68
D    7   D   70
V    8   V   71
Y    9   V   72
V   11   V   73
W   12   P   75
A   13   A   76
L   14   V   78
P   15   P   79
D   16   R   80
E   17   K   81
E   18   M   84
S   19   T   85
E   20   D   87
P   21   D   88
R   22   L   89
F   23   F   90
K   24   N   91
K   25   A   98
L   26   T   99
M   27   L  100
E   28   T  101
A   29   A  102
L   30   A  103
R   31   C  104
S   32   A  105
E   33   Q  106
F   34   H  107
T   35   C  108
G   36   P  109
P   37   D  110
R   38   A  111
V   47   M  112
A   49   I  113
Y   50   C  114
L   51   I  115
T   52   I  116
A   53   S  117
D   54   N  118
E   55   P  119
A   56   V  120
K   57   N  121
K   58   S  122
M   59   T  123
F   60   I  124
E   61   P  125
S   62   I  126
A   63   T  127
C   64   A  128
D   65   E  129
G   66   V  130
L   67   F  131
K   68   K  132
A   69   K  133
Y   70   H  134
T   71   G  135
A   72   V  136
T   73   N  138
V   74   P  139
D   75   N  140
R   76   K  141
V   77   I  142
S   78   V  145
T   79   T  146
G   80   T  147
T   81   L  148
F   82   D  149
F   83   I  150
F   84   V  151
Q   85   R  152
C   86   A  153
V   87   N  154
F   88   A  155
L   89   F  156
L   90   V  157
L   91   A  158
Q   92   E  159
T   93   L  160
T   94   D  164
P   95   P  165
E   96   A  166
V   97   R  167
M   98   V  168
E   99   V  172
A  100   I  173
G  101   G  174
E  102   G  175
H  103   H  176
C  104   A  177
K  105   K  179
N  106   T  180
H  107   I  181
F  108   I  182
N  109   P  183
C  110   C  188
S  111   T  189
T  112   P  190
T  113   K  191
T  114   V  192
P  115   D  193
Y  116   F  194
M  117   Q  196
P  118   D  197
H  119   Q  198
L  120   L  199
S  121   S  200
L  122   T  201
L  123   L  202
Y  124   T  203
A  125   G  204
E  126   R  205
L  127   I  206
T  128   Q  207
E  129   E  208
E  130   A  209
E  131   G  210
K  132   T  211
K  133   E  212
N  134   V  213
A  135   V  214
Q  136   K  215
E  137   A  216
K  138   K  217
A  139   A  218
Y  140   G  219
T  141   A  220
D  143   G  221
S  144   S  222
S  145   A  223
L  146   L  225
G  148   S  226
L  149   M  227
S  150   A  228
F  151   Y  229
R  152   A  230
L  153   G  231
N  154   A  232
R  155   R  233
L  156   F  234
A  157   V  235
L  158   F  236
C  159   S  237
K  160   L  238
E  164   V  239
D  165   D  240
K  166   A  241
T  167   N  243
L  168   K  245
E  169   E  246
T  170   V  248
W  171   V  249
E  172   E  250
T  173   C  251
V  174   S  252
A  175   F  253
V  176   V  254
C  177   K  255
N  178   S  256
L  179   Q  257
N  180   E  258
P  181   T  259
TER
END
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Ajay K. Royyuru, PhD                   Phone: (914) 945-1335
Manager, Structural Biology            Fax: (914) 945-4104
Computational Biology Center          mailto:ajayr@us.ibm.com
IBM Research                                 --- IBM Internal ---
T. J. Watson Research Center           Phone: T/L 862-1335
P.O. Box 218, Route 134                  Fax: T/L 862-4104
Yorktown Heights, NY 10598            Office: 13-106D



