
PFRMAT AL
TARGET T0094
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 1ygh_B
L 14 V 105
P 15 N 106
D 16 N 107
E 17 D 108
E 18 N 109
S 19 T 110
E 20 K 111
P 21 E 112
R 22 N 113
F 23 M 114
K 24 M 115
K 25 V 116
L 26 L 117
M 27 T 118
A 29 G 119
L 30 L 120
R 31 K 121
S 32 N 122
E 33 I 123
F 34 F 124
T 35 Q 125
R 38 K 126
F 39 Q 127
V 40 L 128
P 41 P 129
H 42 K 130
V 43 M 131
T 44 P 132
V 45 K 133
A 46 E 134
V 47 Y 135
S 48 I 136
A 49 A 137
Y 50 R 138
L 51 L 139
T 52 V 140
A 53 Y 141
D 54 D 142
E 55 R 143
A 56 S 144
K 57 H 145
K 58 L 146
M 59 S 147
F 60 M 148
E 61 A 149
S 62 V 150
A 63 I 151
C 64 R 152
D 65 K 153
G 66 P 154
L 67 L 155
K 68 T 156
A 69 V 157
Y 70 V 158
T 71 G 159
A 72 G 160
T 73 I 161
V 74 T 162
D 75 Y 163
R 76 R 164
V 77 P 165
S 78 F 166
T 79 D 167
G 80 K 168
T 81 R 169
F 82 E 170
F 83 F 171
F 84 A 172
Q 85 E 173
C 86 I 174
V 87 V 175
F 88 F 176
L 89 C 177
L 90 A 178
L 91 I 179
Q 92 S 180
T 93 S 181
T 94 T 182
P 95 E 183
E 96 Q 184
V 97 V 185
M 98 R 186
E 99 G 187
A 100 Y 188
G 101 G 189
E 102 A 190
H 103 H 191
C 104 L 192
K 105 M 193
N 106 N 194
H 107 H 195
F 108 L 196
N 109 K 197
P 115 D 198
Y 116 Y 199
M 117 V 200
P 118 R 201
H 119 N 202
L 120 T 203
S 121 S 204
L 122 N 205
L 123 I 206
Y 124 K 207
A 125 Y 208
E 126 F 209
L 127 L 210
T 128 T 211
E 129 Y 212
E 130 A 213
E 131 D 214
K 132 K 222
K 133 K 223
N 134 Q 224
A 135 G 225
Q 136 F 226
E 137 T 227
K 138 K 228
A 139 E 229
Y 140 I 230
T 141 T 231
L 142 L 232
D 143 D 233
S 144 K 234
S 145 S 235
R 155 I 236
L 156 W 237
A 157 M 238
L 158 G 239
C 159 Y 240
K 160 I 241
T 161 K 242
D 162 D 243
T 163 Y 244
E 164 E 245
D 165 G 246
K 166 G 247
T 167 T 248
L 168 L 249
E 169 M 250
T 170 Q 251
C 177 C 252
N 178 S 253
L 179 M 254
N 180 L 255
P 181 P 256
TER
END

