
PFRMAT AL
TARGET T0094
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.32 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1kmma1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1kmm_A
E   3     D   326 
V   4     P   327 
K   5     V   328 
K   6     V   329 
D   7     D   330 
V   8     I   331 
Y   9     Y   332 
S  10     L   333 
V  11     V   334 
L  14     A   335 
P  15     S   336 
D  16     G   337 
E  17     A   338 
E  18     D   339 
S  19     T   340 
E  20     Q   341 
P  21     S   342 
R  22     A   343 
F  23     A   344 
K  24     M   345 
K  25     A   346 
L  26     L   347 
M  27     A   348 
E  28     E   349 
A  29     R   350 
L  30     L   351 
R  31     R   352 
S  32     D   353 
E  33     E   354 
F  34     L   355 
T  35     P   356 
G  36     G   357 
P  37     V   358 
R  38     K   359 
L  51     L   360 
T  52     M   361 
A  53     T   362 
D  54     N   363 
E  55     H   364 
A  56     G   365 
K  57     G   366 
K  58     G   367 
M  59     N   368 
F  60     F   369 
E  61     K   370 
S  62     K   371 
A  63     Q   372 
C  64     F   373 
D  65     A   374 
G  66     R   375 
L  67     A   376 
K  68     D   377 
A  69     K   378 
Y  70     W   379 
T  71     G   380 
A  72     A   381 
T  73     R   382 
V  74     V   383 
D  75     A   384 
R  76     V   385 
V  77     V   386 
M 117     L   387 
P 118     G   388 
H 119     E   389 
L 120     S   390 
S 121     E   391 
L 122     V   392 
L 123     A   393 
Y 124     N   394 
A 125     G   395 
E 126     T   396 
L 127     A   397 
T 128     V   398 
E 129     V   399 
E 130     K   400 
E 131     D   401 
K 132     L   402 
K 133     R   403 
N 134     S   404 
A 135     G   405 
Q 136     E   406 
E 137     Q   407 
K 138     T   408 
A 139     A   409 
Y 140     V   410 
T 141     A   411 
L 142     Q   412 
D 143     D   413 
S 144     S   414 
S 145     V   415 
L 146     A   416 
D 147     A   417 
G 148     H   418 
L 149     L   419 
S 150     R   420 
F 151     T   421 
R 152     L   422 
L 153     L   423 
N 154     G   424 
TER
END

