
PFRMAT AL
TARGET T0096
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.45 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2cgpc1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 2cgp_A
I   3     D   138 
K   4     V   139 
A   5     T   140 
Q   6     G   141 
S   7     R   142 
P   8     I   143 
A   9     A   144 
G  10     Q   145 
F  11     T   146 
A  12     L   147 
E  13     L   148 
E  14     N   149 
Y  15     L   150 
I  16     A   151 
I  17     K   152 
E  18     Q   153 
S  19     P   154 
I  20     D   155 
W  21     A   156 
N  22     M   157 
N  23     T   158 
R  24     H   159 
F  25     P   160 
P  26     D   161 
P  27     G   162 
G  28     M   163 
T  29     Q   164 
I  30     I   165 
L  31     K   166 
P  32     I   167 
A  33     T   168 
E  34     R   169 
R  35     Q   170 
E  36     E   171 
L  37     I   172 
S  38     G   173 
E  39     Q   174 
L  40     I   175 
I  41     V   176 
G  42     G   177 
V  43     C   178 
T  44     S   179 
R  45     R   180 
T  46     E   181 
T  47     T   182 
L  48     V   183 
R  49     G   184 
E  50     R   185 
V  51     I   186 
L  52     L   187 
Q  53     K   188 
R  54     M   189 
L  55     L   190 
A  56     E   191 
R  57     D   192 
D  58     Q   193 
G  59     N   194 
W  60     L   195 
L  61     I   196 
T  62     S   197 
I  63     A   198 
Q  64     H   199 
H  65     G   200 
G  66     K   201 
K  67     T   202 
P  68     I   203 
T  69     V   204 
K  70     V   205 
V  71     Y   206 
N  72     G   207 
TER
END

