
PFRMAT AL
TARGET T0096
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.99 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1afra
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1afr_A
M   1     M    32 
V   2     P    33 
I   3     P    34 
K   4     Q    35 
A   5     K    36 
Q   6     I    37 
S   7     E    38 
P   8     I    39 
A   9     F    40 
G  10     K    41 
F  11     S    42 
A  12     L    43 
E  13     D    44 
E  14     N    45 
Y  15     W    46 
I  16     A    47 
I  17     E    48 
E  18     E    49 
S  19     N    50 
I  20     I    51 
W  21     L    52 
N  22     V    53 
N  23     H    54 
R  24     L    55 
F  25     K    56 
P  26     P    57 
P  27     V    58 
G  28     E    59 
T  29     K    60 
I  30     C    61 
L  31     W    62 
P  32     Q    63 
A  33     P    64 
E  34     Q    65 
R  35     D    66 
E  36     F    67 
L  37     L    68 
S  38     S    73 
E  39     D    74 
L  40     G    75 
I  41     F    76 
G  42     D    77 
V  43     E    78 
T  44     Q    79 
R  45     V    80 
T  46     R    81 
T  47     E    82 
L  48     L    83 
R  49     R    84 
E  50     E    85 
V  51     R    86 
L  52     A    87 
Q  53     K    88 
R  54     E    89 
L  55     I   103 
A  56     T   104 
R  57     E   105 
D  58     E   106 
G  59     A   107 
W  60     L   108 
L  61     P   109 
T  62     T   110 
I  63     Y   111 
Q  64     Q   112 
H  65     T   113 
G  66     M   114 
K  67     I   134 
P  68     W   135 
T  69     T   136 
K  70     R   137 
V  71     A   138 
N  72     W   139 
N  73     T   140 
F  74     A   141 
W  75     E   142 
E  76     E   143 
T  77     N   144 
S  78     R   145 
G  79     H   146 
L  80     G   147 
N  81     D   148 
I  82     L   149 
L  83     L   150 
E  84     N   151 
T  85     K   152 
L  86     Y   153 
A  87     L   154 
R  88     Y   155 
L  89     L   156 
D  90     D   161 
H  91     M   162 
E  92     R   163 
S  93     Q   164 
V  94     I   165 
P  95     E   166 
Q  96     K   167 
L  97     T   168 
I  98     I   169 
D  99     Q   170 
N 100     Y   171 
L 101     L   172 
L 102     I   173 
S 103     G   174 
V 104     I   190 
R 105     Y   191 
T 106     T   192 
N 107     S   193 
I 108     F   194 
S 109     Q   195 
T 110     E   196 
I 111     R   197 
F 112     A   198 
I 113     T   199 
R 114     F   200 
T 115     I   201 
A 116     S   202 
F 117     H   203 
R 118     G   204 
Q 119     N   205 
H 120     T   206 
P 121     A   207 
D 122     R   208 
K 123     Q   209 
A 124     A   210 
Q 125     K   211 
E 126     K   217 
V 127     L   218 
L 128     A   219 
A 129     Q   220 
T 130     I   221 
A 131     C   222 
N 132     G   223 
E 133     T   224 
V 134     I   225 
A 135     A   226 
D 136     A   227 
H 137     D   228 
A 138     E   229 
D 139     K   230 
A 140     R   231 
F 141     H   232 
A 142     E   233 
E 143     T   234 
L 144     A   235 
D 145     Y   236 
Y 146     T   237 
N 147     K   238 
I 148     I   239 
F 149     V   240 
R 150     E   241 
G 151     K   242 
L 152     L   243 
A 153     F   244 
F 154     E   245 
A 155     I   246 
S 156     D   247 
G 157     P   248 
N 158     D   249 
P 159     G   250 
I 160     T   251 
Y 161     V   252 
G 162     L   253 
L 163     A   254 
I 164     F   255 
L 165     A   256 
N 166     D   257 
G 167     M   258 
M 168     M   259 
K 169     R   260 
G 170     N   277 
L 171     L   278 
Y 172     F   279 
T 173     D   280 
R 174     H   281 
I 175     F   282 
G 176     S   283 
R 177     A   284 
H 178     V   285 
Y 179     A   286 
F 180     Q   287 
A 181     R   288 
N 182     L   289 
P 183     A   294 
E 184     K   295 
A 185     D   296 
R 186     Y   297 
S 187     A   298 
L 188     D   299 
A 189     I   300 
L 190     L   301 
G 191     E   302 
F 192     F   303 
Y 193     L   304 
H 194     V   305 
K 195     G   306 
L 196     R   307 
S 197     W   308 
A 198     K   309 
L 199     V   310 
C 200     D   311 
S 201     K   312 
E 202     L   313 
G 203     T   314 
A 204     G   315 
H 205     L   316 
D 206     S   317 
Q 207     A   318 
V 208     E   319 
Y 209     G   320 
E 210     Q   321 
T 211     K   322 
V 212     A   323 
R 213     Q   324 
R 214     D   325 
Y 215     Y   326 
G 216     V   327 
H 217     C   328 
E 218     R   329 
S 219     L   330 
G 220     P   331 
E 221     P   332 
I 222     R   333 
W 223     I   334 
H 224     R   335 
R 225     R   336 
M 226     L   337 
Q 227     E   338 
K 228     E   339 
N 229     R   340 
L 230     A   341 
P 231     Q   342 
G 232     G   343 
D 233     R   344 
L 234     A   345 
A 235     K   346 
I 236     E   347 
Q 237     A   348 
G 238     P   349 
R 239     T   350 
TER
END

