
PFRMAT AL
TARGET T0096
AUTHOR 3995-5176-6362
METHOD Chandonia & Cohen, mostly unpublished.
METHOD Uses a combination of PSI-BLAST scoring matrix
METHOD and Pred2ary secondary structure prediction.
METHOD Pred2ary page is http://www.cmpharm.ucsf.edu/~jmc/pred2ary/
METHOD The potential is documented in the paper by
METHOD Schwartz et al which is referenced on
METHOD my research page: http://www.cmpharm.ucsf.edu/~jmc/research.html
MODEL 1
PARENT 1qjb_A
M 1 M 1
V 2 D 2
I 3 K 3
K 4 N 4
A 5 E 5
Q 6 L 6
S 7 V 7
P 8 Q 8
A 9 K 9
G 10 A 10
F 11 K 11
A 12 L 12
E 13 A 13
E 14 E 14
Y 15 Q 15
I 16 D 21
I 17 M 22
E 18 A 23
S 19 A 24
I 20 C 25
W 21 M 26
N 22 K 27
N 23 S 28
R 24 V 29
F 25 T 30
P 26 E 31
P 27 Q 32
G 28 G 33
T 29 A 34
I 30 E 35
L 31 L 36
P 32 S 37
A 33 N 38
E 34 E 39
R 35 E 40
R 49 R 41
E 50 N 42
V 51 L 43
L 52 L 44
Q 53 S 45
R 54 V 46
L 55 A 47
A 56 Y 48
R 57 K 49
D 58 N 50
G 59 V 51
W 60 V 52
L 61 G 53
T 62 A 54
I 63 R 55
Q 64 R 56
H 65 S 57
G 66 S 58
K 67 W 59
P 68 R 60
T 69 V 61
K 70 V 62
V 71 S 63
N 72 S 64
N 73 I 65
F 74 E 66
W 75 Q 67
E 76 K 68
N 81 E 73
I 82 K 74
L 83 K 75
E 84 Q 76
T 85 Q 77
L 86 M 78
A 87 A 79
R 88 R 80
L 89 E 81
D 90 Y 82
H 91 R 83
E 92 E 84
S 93 K 85
V 94 I 86
P 95 E 87
Q 96 T 88
L 97 E 89
I 98 L 90
D 99 R 91
N 100 D 92
L 101 I 93
L 102 C 94
S 103 N 95
V 104 D 96
R 105 V 97
T 106 L 98
N 107 S 99
I 108 L 100
S 109 L 101
T 110 E 102
I 111 K 103
F 112 F 104
I 113 L 105
R 114 I 106
T 115 P 107
A 116 N 108
F 117 A 109
R 118 S 110
Q 119 Q 111
H 120 A 112
P 121 E 113
D 122 S 114
K 123 K 115
A 124 V 116
Q 125 F 117
E 126 Y 118
V 127 L 119
L 128 K 120
A 129 M 121
T 130 K 122
A 131 G 123
N 132 D 124
E 133 Y 125
I 148 Y 126
F 149 R 127
R 150 Y 128
G 151 L 129
L 152 A 130
A 153 E 131
F 154 V 132
A 155 A 133
S 156 A 134
G 157 G 135
N 158 D 136
P 159 G 140
I 160 I 141
Y 161 V 142
G 162 D 143
L 163 Q 144
I 164 S 145
L 165 Q 146
N 166 Q 147
G 167 A 148
M 168 Y 149
K 169 Q 150
G 170 E 151
L 171 A 152
Y 172 F 153
T 173 E 154
R 174 I 155
I 175 S 156
G 176 K 157
R 177 K 158
H 178 E 159
Y 179 M 160
F 180 Q 161
A 181 P 162
N 182 T 163
P 183 H 164
E 184 P 165
A 185 I 166
R 186 R 167
S 187 L 168
L 188 G 169
A 189 L 170
L 190 A 171
G 191 L 172
F 192 N 173
Y 193 F 174
H 194 S 175
K 195 V 176
L 196 F 177
S 197 Y 178
A 198 Y 179
L 199 E 180
C 200 I 181
S 201 L 182
E 202 N 183
G 203 S 184
A 204 P 185
H 205 E 186
D 206 K 187
Q 207 A 188
V 208 C 189
Y 209 S 190
E 210 L 191
T 211 A 192
V 212 K 193
R 213 T 194
R 214 A 195
Y 215 F 196
G 216 D 197
H 217 E 198
E 218 A 199
S 219 I 200
G 220 A 201
E 221 E 208
I 222 E 209
W 223 S 210
H 224 Y 211
R 225 K 212
M 226 D 213
Q 227 S 214
K 228 T 215
N 229 L 216
L 230 I 217
P 231 M 218
G 232 Q 219
D 233 L 220
L 234 L 221
A 235 R 222
I 236 D 223
Q 237 N 224
G 238 D 231
R 239 T 232
TER
END

