
PFRMAT AL
TARGET T0096
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1DDN_A
REMARK DATE	1998-10-14
REMARK SCORE	?
P 8 L 4
A 9 V 5
G 10 D 6
F 11 T 7
A 12 T 8
E 13 E 9
E 14 M 10
Y 15 Y 11
I 16 L 12
I 17 R 13
E 18 T 14
S 19 I 15
I 20 Y 16
W 21 E 17
N 22 L 18
N 23 E 19
R 24 E 20
F 25 E 21
P 26 G 22
P 27 V 23
G 28 T 24
T 29 P 25
I 30 L 26
L 31 R 27
P 32 A 28
A 33 R 29
E 34 I 30
R 35 A 31
E 36 E 32
L 37 R 33
S 38 L 34
E 39 E 35
L 40 Q 36
I 41 S 37
G 42 G 38
V 43 P 39
T 44 T 40
R 45 V 41
T 46 S 42
T 47 Q 43
L 48 T 44
R 49 V 45
E 50 A 46
V 51 R 47
L 52 M 48
Q 53 E 49
R 54 R 50
L 55 D 51
A 56 G 52
R 57 L 53
D 58 V 54
G 59 V 55
W 60 V 56
L 61 A 57
T 62 S 58
I 63 D 59
Q 64 R 60
H 65 S 61
G 66 L 62
K 67 Q 63
P 68 M 64
T 69 T 65
K 70 P 66
V 71 T 67
N 72 G 68
N 73 R 69
F 74 T 70
W 75 L 71
E 76 A 72
T 77 T 73
S 78 A 74
G 79 V 75
L 80 M 76
N 81 R 77
I 82 K 78
L 83 R 80
E 84 L 81
T 85 A 82
L 86 E 83
A 87 R 84
R 88 L 85
L 89 L 86
D 90 T 87
H 91 D 88
E 92 I 89
S 93 I 90
V 94 G 91
P 95 L 92
Q 96 D 93
L 97 I 94
I 98 N 95
D 99 K 96
N 100 V 97
L 101 H 98
L 102 D 99
S 103 E 100
V 104 A 101
R 105 D 102
T 106 R 103
N 107 M 108
I 108 S 109
S 109 D 110
T 110 E 111
I 111 V 112
F 112 E 113
I 113 R 114
R 114 R 115
T 115 L 116
A 116 V 117
F 117 K 118
R 118 V 119
Q 119 L 120
TER
END

