
PFRMAT AL
TARGET T0097
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1d7m_A
P  126 E 243
A  127 M 244
Y  128 A 245
D  129 N 246
A  130 R 247
L  131 L 248
A  132 A 249
G  133 G 250
Q  134 E 252
F  135 N 253
I  136 S 254
E  137 L 255
A  138 E 256
S  139 S 257
S  140 E 258
R  141 K 259
E  142 V 260
A  143 S 261
R  144 R 262
Q  145 E 263
A  146 Q 264
I  147 L 265
L  148 I 266
K  149 K 267
Q  150 Q 268
G  151 K 269
D  153 D 270
G  154 Q 271
L  155 L 272
S  156 N 273
G  157 S 274
V  158 L 275
K  159 L 276
E  160 A 277
T  161 S 278
D  162 L 279
K  163 E 280
K  164 S 281
W  165 E 282
A  166 G 283
S  167 A 284
Q  168 E 285
Y  169 R 286
L  170 E 287
K  171 K 288
I  172 R 289
M  173 L 290
G  174 R 291
K  175 E 292
I  176 L 293
L  177 E 294
D  178 A 295
Q  179 K 296
G  180 L 297
E  181 D 298
D  182 E 299
F  183 T 300
P  184 L 301
A  185 K 302
S  186 N 303
E  187 E 305
L  188 L 306
A  189 E 307
R  190 K 308
I  191 L 309
S  192 A 310
K  193 R 311
L  194 M 312
I  195 L 314
E  196 E 315
N  197 A 316
K  198 R 317
M  199 L 318
S  200 A 319
E  201 K 320
G  202 T 321
K  203 E 322
K  204 K 323
E  205 D 324
E  206 R 325
L  207 A 326
Q  208 I 327
R  209 L 328
S  210 E 329
L  211 L 330
N  212 K 331
I  213 L 332
L  214 A 333
T  215 E 334
A  216 A 335
F  217 I 336
R  218 D 337
K  219 E 338
K  220 K 339
E  223 S 340
K  224 K 341
E  225 L 342
E  226 E 343
TER
END

