
PFRMAT AL
TARGET T0097
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 5icb
S  139 K 1
S  140 S 2
R  141 P 3
E  142 E 4
A  143 E 5
R  144 L 6
Q  145 K 7
A  146 G 8
I  147 I 9
L  148 F 10
K  149 E 11
Q  150 K 12
G  151 Y 13
Q  152 A 14
D  153 A 15
G  154 K 16
L  155 E 17
S  156 G 18
G  157 D 19
V  158 P 20
K  159 N 21
E  160 Q 22
T  161 L 23
D  162 S 24
K  163 K 25
K  164 E 26
W  165 E 27
A  166 L 28
S  167 K 29
Q  168 L 30
Y  169 L 31
L  170 L 32
K  171 Q 33
I  172 T 34
M  173 E 35
G  174 F 36
K  175 P 37
I  176 S 38
L  177 L 39
D  178 L 40
Q  179 K 41
G  180 G 42
E  181 P 43
D  182 S 44
F  183 T 45
P  184 L 46
A  185 D 47
S  186 E 48
E  187 L 49
L  188 F 50
A  189 E 51
R  190 E 52
I  191 L 53
S  192 D 54
K  193 K 55
N  197 N 56
K  198 G 57
M  199 D 58
S  200 G 59
E  201 E 60
G  202 V 61
K  203 S 62
K  204 F 63
E  205 E 64
E  206 E 65
L  207 F 66
Q  208 Q 67
R  209 V 68
S  210 L 69
L  211 V 70
N  212 K 71
I  213 K 72
L  214 I 73
T  215 S 74
A  216 Q 75
TER
END

