
PFRMAT AL
TARGET T0097
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1br0_A
L  125 D 27
P  126 R 28
A  127 F 29
Y  128 M 30
D  129 D 31
A  130 E 32
L  131 F 33
A  132 V 37
G  133 E 38
Q  134 E 39
F  135 F 43
I  136 I 44
E  137 D 45
A  138 K 46
S  139 I 47
R  141 A 48
E  142 E 49
A  143 N 50
R  144 V 51
Q  145 E 52
A  146 E 53
I  147 V 54
L  148 K 55
K  149 R 56
Q  150 K 57
G  151 H 58
Q  152 S 59
D  153 A 60
G  154 I 61
L  155 L 62
S  156 A 63
G  157 S 64
V  158 P 65
K  159 K 72
E  160 E 73
T  161 E 74
D  162 L 75
K  163 E 76
K  164 E 77
W  165 L 78
A  166 M 79
S  167 S 80
Q  168 D 81
Y  169 I 82
L  170 K 83
K  171 K 84
I  172 T 85
M  173 A 86
G  174 N 87
K  175 K 88
I  176 V 89
L  177 R 90
D  178 S 91
Q  179 K 92
P  184 L 93
A  185 K 94
S  186 S 95
E  187 I 96
L  188 E 97
A  189 Q 98
R  190 S 99
I  191 I 100
S  192 E 101
K  193 Q 102
L  194 E 103
I  195 E 104
E  196 G 105
N  197 L 106
K  198 N 107
M  199 R 108
S  200 S 109
E  201 S 110
G  202 A 111
K  203 D 112
K  204 L 113
E  205 R 114
E  206 I 115
L  207 R 116
Q  208 K 117
R  209 T 118
S  210 Q 119
L  211 H 120
N  212 S 121
I  213 T 122
L  214 L 123
T  215 R 125
A  216 K 126
F  217 F 127
R  218 V 128
K  219 E 129
K  220 V 130
G  221 M 131
A  222 S 132
E  223 E 133
K  224 R 144
E  225 S 145
E  226 K 146
TER
END

