
PFRMAT AL
TARGET T0098
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1dkg_A
D  139 A 34
N  140 E 35
K  141 Q 36
P  142 V 37
K  143 D 38
N  144 P 39
L  145 R 40
D  146 D 41
A  147 E 42
S  148 K 43
I  149 V 44
T  150 A 45
S  151 N 46
I  152 L 47
I  153 E 48
H  154 A 49
E  155 Q 50
I  156 L 51
I  162 A 52
K  163 E 53
G  164 A 54
Y  165 Q 55
L  166 T 56
Y  167 R 57
L  168 E 58
R  169 R 59
E  170 D 60
A  171 G 61
I  172 I 62
A  173 L 63
M  174 R 64
V  175 V 65
Y  176 K 66
H  177 A 67
D  178 E 68
I  179 M 69
E  180 E 70
L  181 N 71
L  182 L 72
G  183 R 73
S  184 R 74
I  185 R 75
T  186 T 76
V  188 E 77
L  189 L 78
Y  190 D 79
P  191 I 80
D  192 E 81
I  193 K 82
A  194 A 83
K  195 H 84
K  196 K 85
Y  197 F 86
N  198 A 87
T  199 L 88
T  200 E 89
A  201 L 95
S  202 L 96
R  203 P 97
V  204 V 98
E  205 I 99
R  206 D 100
A  207 S 101
I  208 L 102
R  209 D 103
H  210 R 104
A  211 A 105
I  212 L 106
E  213 E 107
V  214 V 108
A  215 A 109
W  216 M 116
S  217 S 117
G  219 A 118
N  220 M 119
L  221 V 120
E  222 E 121
S  223 D 122
I  224 I 123
S  225 E 124
S  226 R 135
L  227 K 136
F  228 F 137
G  229 G 138
Y  230 V 139
T  231 E 140
V  232 V 141
S  233 T 145
V  234 N 146
S  235 V 147
K  236 P 148
A  237 L 149
K  238 D 150
P  239 P 151
T  240 N 152
N  241 V 153
S  242 H 154
E  243 Q 155
F  244 A 156
I  245 I 157
A  246 A 158
M  247 M 159
V  248 I 173
A  249 M 174
D  250 Q 175
K  251 K 176
L  252 T 191
R  253 V 192
L  254 A 193
E  255 K 194
H  256 A 195
K  257 K 196
A  258 A 197
TER
END

