
PFRMAT AL
TARGET T0098
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  1
PARENT 2at2_C
K 196 K 229
Y 197 Y 230
N 198 G 231
T 199 L 232
T 200 T 233
A 201 V 234
S 202 E 235
R 203 R 236
V 204 A 237
E 205 E 238
R 206 R 239
A 207 M 240
I 208 K 241
R 209 R 242
H 210 H 243
A 211 A 244
I 212 I 245
E 213 P 249
V 214 A 250
A 215 P 251
W 216 V 252
S 217 N 253
R 218 R 254
G 219 G 255
L 221 V 256
E 222 E 257
S 223 I 258
I 224 D 259
S 225 D 260
S 226 S 261
L 227 L 262
F 228 V 263
G 229 E 264
Y 230 S 265
T 231 E 266
V 232 K 267
S 233 S 268
V 234 R 269
S 235 I 270
K 236 F 271
A 237 K 272
K 238 Q 273
P 239 M 274
T 240 K 275
N 241 N 276
S 242 G 277
E 243 V 278
F 244 F 279
I 245 I 280
A 246 R 281
M 247 M 282
TER
END

