
PFRMAT AL
TARGET T0099
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=15.77
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: sh3
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1shf_A
E   1     L    86
F   2     F    87
I   3     V    88
A   4     A    89
I   5     L    90
Y   6     Y    91
D   7     D    92
Y   8     Y    93
K   9     E    94
A  10     A    95
E  11     R    96
T  12     T    97
E  13     E    98
E  14     D    99
D  15     D   100
L  16     L   101
T  17     S   102
I  18     F   103
K  19     H   104
K  20     K   105
G  21     G   106
E  22     E   107
K  23     K   108
L  24     F   109
E  25     Q   110
I  26     I   111
I  27     L   112
E  28     N   113
G  31     G   117
D  32     D   118
W  33     W   119
W  34     W   120
K  35     E   121
A  36     A   122
K  37     R   123
A  38     S   124
I  39     L   125
G  40     T   126
S  41     T   127
G  42     G   128
E  43     T   130
G  45     G   131
Y  46     Y   132
I  47     I   133
P  48     P   134
A  49     S   135
N  50     N   136
Y  51     Y   137
I  52     V   138
A  53     A   139
A  54     P   140
A  55     V   141
E  56     D   142
TER
END

