
PFRMAT AL
TARGET T0099
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1efn_A
E    1 A 85
F    2 F 87
I    3 V 88
A    4 A 89
I    5 L 90
Y    6 Y 91
D    7 D 92
Y    8 Y 93
K    9 E 94
A   10 A 95
E   11 I 96
T   12 T 97
E   13 E 98
E   14 D 99
D   15 D 100
L   16 L 101
T   17 S 102
I   18 F 103
K   19 H 104
K   20 K 105
G   21 G 106
E   22 E 107
K   23 K 108
L   24 F 109
E   25 Q 110
I   26 I 111
I   27 L 112
E   28 N 113
K   29 S 114
E   30 E 116
G   31 G 117
D   32 D 118
W   33 W 119
W   34 W 120
K   35 E 121
A   36 A 122
K   37 R 123
A   38 S 124
I   39 L 125
G   40 T 126
S   41 T 127
G   42 G 128
E   43 E 129
I   44 T 130
G   45 G 131
Y   46 Y 132
I   47 I 133
P   48 P 134
A   49 S 135
N   50 N 136
Y   51 Y 137
I   52 V 138
A   53 A 139
A   54 P 140
A   55 V 141
TER
END

