
PFRMAT AL
TARGET T0099
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1awx
E    1 K 10
F    2 V 11
I    3 V 12
A    4 A 13
I    5 L 14
Y    6 Y 15
D    7 D 16
Y    8 Y 17
K    9 M 18
A   10 P 19
E   11 M 20
T   12 N 21
E   13 A 22
E   14 N 23
D   15 D 24
L   16 L 25
T   17 Q 26
I   18 L 27
K   19 R 28
K   20 K 29
G   21 G 30
E   22 D 31
K   23 E 32
L   24 Y 33
E   25 F 34
I   26 I 35
I   27 L 36
E   28 E 37
K   29 E 38
E   30 S 39
G   31 N 40
D   32 P 42
W   33 W 43
W   34 W 44
K   35 R 45
A   36 A 46
K   37 R 47
A   38 D 48
G   40 K 49
S   41 N 50
G   42 G 51
E   43 Q 52
I   44 E 53
G   45 G 54
Y   46 Y 55
I   47 I 56
P   48 P 57
A   49 S 58
N   50 N 59
Y   51 Y 60
I   52 V 61
A   53 T 62
A   54 E 63
A   55 A 64
E   56 S 67
TER
END

