
PFRMAT AL
TARGET T0099
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  2
PARENT 1nyf_
F 2 F 87
I 3 V 88
A 4 A 89
I 5 L 90
Y 6 Y 91
D 7 D 92
Y 8 Y 93
K 9 E 94
A 10 A 95
E 11 R 96
T 12 T 97
E 13 E 98
E 14 D 99
D 15 D 100
L 16 L 101
T 17 S 102
I 18 F 103
K 19 H 104
K 20 K 105
G 21 G 106
E 22 E 107
K 23 K 108
L 24 F 109
E 25 Q 110
I 26 I 111
I 27 L 112
E 28 N 113
K 29 S 114
E 30 S 115
G 31 E 116
D 32 G 117
W 33 W 119
W 34 W 120
K 35 E 121
A 36 A 122
K 37 R 123
A 38 S 124
I 39 L 125
G 40 T 126
S 41 T 127
G 42 G 128
E 43 E 129
I 44 T 130
G 45 G 131
Y 46 Y 132
I 47 I 133
P 48 P 134
A 49 S 135
N 50 N 136
Y 51 Y 137
I 52 V 138
A 53 A 139
A 54 P 140
A 55 V 141
TER
END

