
PFRMAT AL
TARGET T0099
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  4
PARENT 1awx_
E 1 K 10
F 2 V 11
I 3 V 12
A 4 A 13
I 5 L 14
Y 6 Y 15
D 7 D 16
Y 8 Y 17
K 9 M 18
A 10 P 19
E 11 M 20
T 12 N 21
E 13 A 22
E 14 N 23
D 15 D 24
L 16 L 25
T 17 Q 26
I 18 L 27
K 19 R 28
K 20 K 29
G 21 G 30
E 22 D 31
K 23 E 32
L 24 Y 33
E 25 F 34
I 26 I 35
I 27 L 36
E 28 E 37
K 29 E 38
E 30 S 39
G 31 N 40
D 32 L 41
W 33 P 42
W 34 W 43
K 35 W 44
A 36 R 45
K 37 A 46
A 38 R 47
I 39 D 48
G 40 K 49
S 41 N 50
G 42 G 51
E 43 Q 52
I 44 E 53
G 45 G 54
Y 46 Y 55
I 47 I 56
P 48 P 57
A 49 S 58
N 50 N 59
Y 51 Y 60
I 52 V 61
A 53 T 62
A 54 E 63
A 55 A 64
E 56 E 65
TER
END

