
PFRMAT AL
TARGET T0099
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1nlo_C
E 1 T 9
F 2 F 10
I 3 V 11
A 4 A 12
I 5 L 13
Y 6 Y 14
D 7 D 15
Y 8 Y 16
K 9 E 17
A 10 S 18
E 11 R 19
T 12 T 20
E 13 E 21
E 14 T 22
D 15 D 23
L 16 L 24
T 17 S 25
I 18 F 26
K 19 K 27
K 20 K 28
G 21 G 29
E 22 E 30
K 23 R 31
L 24 L 32
E 25 Q 33
I 26 I 34
I 27 V 35
E 28 N 36
K 29 N 37
E 30 E 39
G 31 G 40
D 32 D 41
W 33 W 42
W 34 W 43
K 35 L 44
A 36 A 45
K 37 H 46
A 38 S 47
I 39 L 48
G 40 T 49
S 41 T 50
G 42 G 51
E 43 Q 52
I 44 T 53
G 45 G 54
Y 46 Y 55
I 47 I 56
P 48 P 57
A 49 S 58
N 50 N 59
Y 51 Y 60
I 52 V 61
A 53 A 62
A 54 P 63
TER
END

