
PFRMAT SS
TARGET T0099
AUTHOR 7770-2312-5826
REMARK GROUP NAME: SHESTOPALOV
REMARK GROUP LEADER: Shestopalov Boris V.
REMARK E-mail: shest@mail.cytspb.rssi.ru
METHOD It is suggested to submit up to five models.
METHOD MODEL A is single sequence prediction,
METHOD obtained by DOUBLET CODE METHOD as model 3
METHOD in CASP3, with slightly modified code tables
METHOD (see CASP3, Shestopalov B.V., submitted).
METHOD MODEL B is obtained from MODEL A by transforming
METHOD ambiguous and undetermined regions into COIL.
METHOD MODEL C is multiple sequence prediction and
METHOD obtained by application of DOUBLET CODE METHOD
METHOD and PSI-BLAST (Altschul S.F., Madden T.L.,
METHOD Schaffer A.A., Zhang J., Zhang Z, Miller W &
METHOD Lipman D.J. /1997/. Nucl. Acid. Res. v. 25,
METHOD pp 3389-3402).
METHOD MODELS D and E are special models to be described
METHOD in the case of their submission.
METHOD The number 1 is assigned to the most scientifically
METHOD nice model.
MODEL  4
REMARK Here MODEL 4 is MODEL A.
E C 0.00
F C 0.00
I E 1.00
A E 1.00
I E 1.00
Y E 1.00
D E 1.00
Y E 1.00
K H 1.00
A H 1.00
E H 1.00
T H 1.00
E H 1.00
E C 0.00
D C 0.00
L E 1.00
T E 1.00
I E 1.00
K C 1.00
K C 1.00
G C 1.00
E C 1.00
K C 0.00
L C 0.00
E C 0.00
I C 0.00
I C 0.00
E C 0.00
K C 0.00
E C 1.00
G C 1.00
D C 1.00
W C 0.00
W C 0.00
K C 0.00
A C 0.00
K C 0.00
A C 0.00
I C 0.00
G C 1.00
S C 1.00
G C 1.00
E C 1.00
I E 1.00
G E 1.00
Y E 1.00
I C 1.00
P C 1.00
A C 1.00
N C 1.00
Y C 1.00
I C 0.00
A C 0.00
A C 0.00
A C 0.00
E C 0.00
END

