
PFRMAT AL
TARGET T0101
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1dbg_A
S   55 Q 26
S   56 V 27
F   57 V 28
N   58 A 29
A   59 S 30
P   60 N 31
M   61 E 32
S   62 T 33
F   63 L 34
S   64 Y 35
A   65 Q 36
A   66 V 37
M   67 V 38
A   68 K 39
A   69 E 40
V   70 V 41
N   71 K 42
P   72 P 43
G   73 G 44
E   74 G 45
L   75 L 46
I   76 V 47
L   77 Q 48
L   78 I 49
K   79 A 50
P   80 D 51
G   81 G 52
T   82 T 53
Y   83 Y 54
T   84 K 55
I   85 D 56
N   93 V 57
T   94 Q 58
I   95 L 59
T   96 I 60
F   97 V 61
N   98 S 62
K   99 N 63
S  100 S 64
G  101 G 65
K  102 K 66
D  103 S 67
G  104 G 68
A  105 L 69
P  106 P 70
I  107 I 71
Y  108 T 72
V  109 I 73
A  110 K 74
A  111 A 75
A  112 L 76
N  113 N 77
C  114 P 78
G  115 G 79
R  116 K 80
A  117 V 81
V  118 F 82
F  119 F 83
F  123 T 84
P  124 G 85
D  125 D 86
S  126 A 87
Q  127 K 88
W  128 V 89
V  129 E 90
Q  130 L 91
A  131 R 92
S  132 G 93
Y  133 E 94
G  134 H 95
F  135 L 96
Y  136 I 97
V  137 L 98
T  138 E 99
G  139 G 100
Y  141 I 101
W  142 W 102
Y  143 F 103
F  144 K 104
K  145 D 105
G  146 G 106
V  147 I 110
E  148 Q 111
V  149 A 112
T  150 W 113
R  151 K 114
A  152 S 115
G  153 H 116
Y  154 G 117
Q  155 P 118
G  156 G 119
A  157 L 120
Y  158 V 121
V  159 A 122
I  160 I 123
G  161 G 125
S  162 S 126
H  163 Y 127
N  164 N 128
T  165 T 151
F  166 E 152
E  167 D 153
N  168 G 154
T  169 K 155
A  170 V 156
F  171 P 157
H  172 Q 158
H  173 H 159
N  174 C 160
R  175 R 161
N  176 I 162
T  177 D 163
G  178 H 164
L  179 C 165
E  180 S 166
I  181 F 167
N  182 T 168
N  183 D 169
G  184 K 170
G  185 I 171
S  186 T 172
Y  187 F 173
N  188 D 174
T  189 Q 175
V  190 V 176
I  191 I 177
N  192 N 178
S  193 L 179
D  194 N 180
A  195 A 185
Y  196 I 186
R  197 K 187
N  198 D 188
Y  199 G 189
D  200 S 190
P  201 V 191
K  202 G 192
K  203 G 193
N  204 P 194
G  205 G 195
S  206 M 196
M  207 Y 197
A  208 H 198
D  209 C 203
G  210 F 204
F  211 F 205
G  212 P 208
P  213 Q 209
K  214 K 210
Q  215 P 211
K  216 G 212
Q  217 N 213
G  218 A 214
P  219 G 215
G  220 G 216
N  221 G 217
R  222 I 218
F  223 R 219
V  224 I 220
G  225 G 221
W  229 Y 222
E  230 Y 223
N  231 R 224
S  232 N 225
D  233 D 226
D  234 I 227
G  235 G 228
F  236 R 229
D  237 N 235
L  238 L 236
F  239 F 237
D  240 K 250
S  241 S 251
P  242 Q 252
Q  243 E 253
K  244 N 254
V  245 V 255
V  246 Y 256
I  247 Y 257
E  248 G 258
N  249 N 259
S  250 T 267
W  251 M 268
A  252 N 269
F  253 F 270
R  254 R 271
N  255 H 272
G  256 G 273
I  257 D 274
N  258 H 275
Y  259 Q 276
W  260 V 277
N  261 I 279
D  262 N 280
S  263 N 281
A  264 F 282
F  265 Y 283
A  266 I 284
G  267 G 285
N  268 N 286
G  269 D 287
N  270 Q 288
G  271 R 289
F  272 F 290
K  273 G 291
L  274 Y 292
G  275 G 293
G  276 G 294
N  277 M 295
Q  278 F 296
A  279 V 297
V  280 W 298
G  281 G 299
T  286 S 300
R  287 R 301
S  288 H 302
V  289 V 303
A  290 I 304
F  291 A 305
G  292 C 306
N  293 N 307
V  294 L 311
S  295 S 312
K  296 E 313
G  297 T 314
F  298 I 315
D  299 K 316
Q  300 S 317
N  301 R 318
N  302 G 319
N  303 N 320
A  304 I 342
G  305 A 343
G  306 N 344
V  307 N 345
T  308 A 346
V  309 F 347
I  310 I 348
N  311 N 349
N  312 V 350
T  313 N 351
S  314 G 352
Y  315 Y 353
K  316 K 392
N  317 P 393
G  318 Y 394
I  319 V 395
N  320 Y 396
Y  321 P 397
G  322 F 398
F  323 F 399
G  324 K 400
S  325 D 401
N  326 D 402
V  327 Y 403
Q  328 F 404
S  329 I 405
G  330 A 406
Q  331 G 407
K  332 K 408
H  333 N 409
Y  334 S 410
F  335 W 411
R  336 T 412
N  337 G 413
N  338 N 414
V  339 V 415
S  340 A 416
L  341 L 417
S  342 G 418
A  343 V 419
S  344 E 420
V  345 K 421
T  346 G 422
V  347 I 423
S  348 P 424
N  349 N 426
A  350 I 427
D  351 S 428
A  352 A 429
K  353 N 430
S  354 R 431
N  355 S 432
S  356 A 433
W  357 Y 434
D  358 K 435
T  359 P 436
G  360 V 437
P  361 K 438
A  362 I 439
A  363 K 440
S  364 D 441
A  365 I 442
S  366 Q 443
D  367 P 444
F  368 I 445
V  369 E 446
S  370 G 447
L  371 I 448
D  372 A 449
T  373 L 450
S  374 D 451
L  375 L 452
A  376 A 454
T  377 L 455
V  378 I 456
S  379 S 457
R  380 K 458
D  381 G 459
N  382 I 460
D  383 T 461
G  384 G 462
T  385 K 463
L  386 P 464
P  387 L 465
E  388 S 466
T  389 W 467
S  390 D 468
L  391 E 469
F  392 V 470
R  393 R 471
L  394 P 472
S  395 Y 473
A  396 W 474
N  397 L 475
S  398 K 476
K  399 E 477
L  400 M 478
I  401 P 479
N  402 G 480
A  403 T 481
G  404 Y 482
T  405 A 483
K  406 L 484
E  407 T 485
S  408 A 486
N  409 R 487
I  410 L 488
S  411 S 489
Y  412 A 490
S  413 D 491
G  414 R 492
S  415 A 493
A  416 A 494
P  417 K 495
D  418 F 496
L  419 K 497
G  420 A 498
A  421 V 499
F  422 I 500
E  423 K 501
R  424 R 502
N  425 N 503
TER
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