
PFRMAT AL
TARGET T0101
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1pcl
T   33 A 1
S   34 V 2
G   35 E 3
I   36 T 4
S   37 D 5
T   38 A 6
K   39 A 7
R   40 T 8
I   41 T 9
Y   42 G 10
Y   43 W 11
V   44 A 12
A   45 T 13
P   46 Q 14
N   47 N 15
G   48 G 16
N   49 G 17
S   50 T 18
S   51 T 19
N   52 G 20
N   53 G 21
G   54 A 22
S   55 K 23
S   56 A 24
F   57 A 25
N   58 K 26
A   59 A 27
P   60 I 33
M   61 S 34
S   62 D 35
F   63 F 36
S   64 K 37
A   65 K 38
A   66 A 39
M   67 L 40
A   68 N 41
A   69 G 42
V   70 T 43
N   71 D 44
P   72 S 45
G   73 S 46
E   74 A 47
L   75 K 48
I   76 I 49
L   77 I 50
L   78 K 51
K   79 V 52
P   80 T 53
G   81 G 54
T   82 P 55
Y   83 I 56
T   84 D 57
I   85 I 58
T   88 S 59
Q   89 G 60
G   90 G 61
K   91 K 62
G   92 A 63
N   93 Y 64
T   94 T 65
S  100 S 66
G  101 F 67
K  102 D 68
D  103 D 69
G  104 Q 70
A  105 K 71
P  106 A 72
I  107 R 73
Y  108 S 74
V  109 Q 75
A  110 I 76
A  111 S 77
A  112 I 78
N  113 P 79
C  114 S 80
G  115 N 81
A  117 T 82
V  118 T 83
F  119 I 84
D  120 I 85
F  121 G 86
S  122 V 87
F  123 G 88
P  124 S 89
D  125 N 90
S  126 G 91
Q  130 K 92
A  131 F 93
S  132 T 94
Y  133 N 95
G  134 G 96
F  135 S 97
Y  136 L 98
V  137 V 99
T  138 I 100
W  142 K 101
Y  143 G 102
F  144 V 103
K  145 K 104
G  146 N 105
V  147 V 106
E  148 I 107
V  149 L 108
T  150 R 109
R  151 N 110
A  152 L 111
G  153 Y 112
Y  154 I 113
Q  155 E 114
G  156 T 115
A  157 P 116
Y  158 V 117
V  159 D 118
I  160 V 119
G  161 A 120
S  162 P 121
H  163 H 122
F  166 Y 123
E  167 E 124
N  168 S 125
T  169 G 126
A  170 D 127
F  171 G 128
H  172 W 129
H  173 N 130
N  174 A 131
R  175 E 132
N  176 W 133
T  177 D 134
G  178 A 135
L  179 A 136
E  180 V 137
I  181 I 138
N  182 D 139
N  183 N 140
S  186 S 141
Y  187 T 142
N  188 N 143
T  189 V 144
V  190 W 145
I  191 V 146
N  192 I 151
S  193 S 152
D  194 D 153
A  195 G 154
Y  196 S 155
R  197 F 156
N  198 T 157
Y  199 D 158
D  200 D 159
P  201 T 162
K  202 T 163
K  203 K 164
N  204 D 165
G  205 G 166
S  206 Y 169
M  207 V 170
A  208 Q 171
D  209 H 172
G  210 D 173
F  211 G 174
G  212 A 175
P  213 L 176
K  214 D 177
Q  215 I 178
K  216 K 179
Q  217 K 180
G  218 G 181
P  219 S 182
G  220 D 183
N  221 Y 184
R  222 T 186
F  223 I 187
V  224 S 188
G  225 Y 189
C  226 S 190
R  227 R 191
A  228 L 200
W  229 I 201
E  230 G 202
N  231 H 203
S  232 S 204
D  233 D 205
D  234 S 206
G  235 N 207
F  236 G 208
D  237 S 209
L  238 Q 210
F  239 D 211
D  240 S 212
S  241 G 213
P  242 K 214
Q  243 L 215
K  244 R 216
V  245 V 217
V  246 T 218
I  247 F 219
E  248 E 229
N  249 R 230
S  250 A 231
W  251 P 232
A  252 R 233
F  253 V 234
R  254 R 235
N  255 F 236
G  256 G 237
I  257 N 243
N  258 N 244
Y  259 V 245
W  260 Y 246
N  261 V 250
D  262 K 251
S  263 H 252
A  264 S 253
F  265 V 254
A  266 Y 255
G  267 P 256
N  268 Y 257
G  269 L 258
N  270 Y 259
G  271 S 260
F  272 F 261
K  273 G 262
L  274 L 263
G  275 G 264
G  276 T 265
N  277 S 266
G  281 G 267
N  282 S 268
H  283 I 269
R  284 L 270
I  285 S 271
T  286 E 272
R  287 S 273
S  288 N 274
V  289 S 275
A  290 F 276
F  291 T 277
G  292 L 278
N  293 N 280
V  294 L 281
S  295 K 282
K  296 S 283
G  297 I 284
F  298 D 285
D  299 G 286
Q  300 K 287
N  301 N 288
N  302 P 289
N  303 E 290
A  304 C 291
G  305 S 292
G  306 I 293
V  307 V 294
T  308 K 295
V  309 Q 296
I  310 F 297
N  311 N 298
N  312 S 299
T  313 K 300
S  314 V 301
Y  315 D 304
K  316 K 305
N  317 G 306
G  318 S 307
I  319 L 308
N  320 V 309
Y  321 N 310
G  322 G 311
F  323 S 312
G  324 T 313
S  325 T 314
N  326 K 316
V  327 L 317
Q  328 D 318
S  329 T 319
G  330 C 320
Q  331 G 321
K  332 L 322
H  333 T 323
Y  334 A 324
F  335 Y 325
R  336 K 326
N  337 P 327
N  338 T 328
V  339 L 329
S  340 P 330
L  341 Y 331
S  342 K 332
A  343 Y 333
S  344 S 334
V  345 A 335
T  346 Q 336
V  347 T 337
S  348 M 338
N  349 T 339
A  350 S 340
D  351 S 341
A  352 L 342
K  353 A 343
S  354 T 344
N  355 S 345
S  356 I 346
W  357 N 347
D  358 N 349
T  359 A 350
G  360 G 351
P  361 Y 352
A  362 G 353
A  363 K 354
S  364 L 355
TER
END

