
PFRMAT AL
TARGET T0101
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1air
S   37 A 1
T   38 T 2
K   39 D 3
R   40 T 4
I   41 G 5
Y   42 G 6
Y   43 Y 7
V   44 A 8
A   45 A 9
P   46 T 10
N   47 A 11
G   48 G 12
N   49 G 13
S   50 N 14
S   51 V 15
N   52 T 16
N   53 G 17
G   54 A 18
S   55 V 19
S   56 S 20
F   57 K 21
N   58 T 22
A   59 A 23
P   60 M 26
M   61 Q 27
S   62 D 28
F   63 I 29
S   64 N 31
A   65 I 32
A   66 I 33
M   67 D 34
A   68 A 35
A   69 A 36
V   70 R 37
N   71 L 38
P   72 D 39
G   73 A 40
E   74 N 41
L   75 G 42
I   76 K 43
L   77 K 44
L   78 V 45
K   79 K 46
P   80 G 47
G   81 G 48
T   82 A 49
Y   83 Y 50
T   84 T 55
I   85 Y 56
P   86 T 57
Y   87 G 58
T   88 N 59
Q   89 E 60
G   90 N 65
K   91 A 66
G   92 A 67
N   93 A 68
T   94 A 69
I   95 N 70
T   96 I 71
F   97 C 72
N   98 G 73
K   99 Q 74
S  100 W 75
G  101 S 76
K  102 K 77
D  103 D 78
G  104 P 79
A  105 R 80
P  106 G 81
I  107 V 82
Y  108 E 83
V  109 I 84
A  110 K 85
A  111 E 86
A  112 F 87
N  113 T 88
C  114 K 89
G  115 G 90
R  116 I 91
A  117 T 92
V  118 I 94
F  119 G 95
D  120 A 96
F  121 N 97
S  122 G 98
F  123 A 101
P  124 N 102
D  125 F 103
S  126 G 104
Q  127 I 105
W  128 W 106
V  129 I 107
Q  130 K 108
A  131 K 109
S  132 S 110
Y  133 S 111
G  134 D 112
F  135 V 113
Y  136 V 114
V  137 V 115
T  138 Q 116
G  139 N 117
D  140 M 118
Y  143 R 119
F  144 I 120
K  145 G 121
G  146 Y 122
V  147 L 123
E  148 P 124
V  149 G 125
T  150 G 126
R  151 A 127
A  152 K 128
G  153 D 129
Y  154 G 130
Q  155 D 131
G  156 M 132
A  157 I 133
Y  158 R 134
V  159 V 135
I  160 D 136
G  161 D 137
S  162 S 138
H  163 P 139
N  164 N 140
T  165 G 157
F  166 T 158
E  167 P 159
N  168 D 160
T  169 N 161
A  170 D 162
F  171 T 163
H  172 T 164
H  173 F 165
N  174 E 166
T  177 S 167
G  178 A 168
L  179 V 169
E  180 D 170
I  181 I 171
N  182 K 172
N  183 G 173
G  184 A 174
G  185 S 175
S  186 N 176
Y  187 T 177
N  188 V 178
T  189 T 179
V  190 V 180
I  191 S 181
N  192 Y 182
S  193 N 183
D  194 Y 184
A  195 I 185
Y  196 H 186
R  197 G 187
N  198 V 188
Y  199 K 189
D  200 K 190
S  206 V 191
M  207 G 192
A  208 L 193
D  209 D 194
G  210 G 195
F  211 S 196
G  212 S 197
P  213 S 198
K  214 S 199
Q  215 D 200
K  216 T 201
G  218 G 202
P  219 R 203
G  220 N 204
N  221 I 205
R  222 T 206
F  223 Y 207
V  224 H 208
G  225 H 209
C  226 N 210
R  227 Y 211
A  228 Y 212
W  229 N 213
E  230 D 214
N  231 V 215
S  232 N 216
D  233 A 217
D  234 R 218
G  235 L 219
Q  243 P 220
K  244 L 221
V  245 Q 222
V  246 R 223
I  247 G 224
E  248 G 225
N  249 L 226
S  250 V 227
W  251 H 228
A  252 A 229
F  253 Y 230
R  254 N 231
N  255 N 232
G  256 L 233
I  257 Y 234
N  258 T 235
Y  259 N 236
W  260 I 237
N  261 T 238
D  262 G 239
S  263 S 240
A  264 G 241
F  265 L 242
A  266 N 243
G  267 R 245
N  268 Q 246
G  269 N 247
N  270 G 248
G  271 Q 249
F  272 A 250
K  273 L 251
L  274 I 252
G  275 E 253
G  276 N 254
N  277 N 255
Q  278 W 256
A  279 F 257
V  280 E 258
G  281 K 259
N  282 A 260
H  283 I 261
R  284 N 262
I  285 V 264
T  286 T 265
R  287 S 266
S  288 R 267
V  289 Y 268
A  290 D 269
F  291 G 270
G  292 K 271
N  293 N 272
V  294 F 273
S  295 G 274
K  296 T 275
G  297 W 276
F  298 V 277
D  299 L 278
Q  300 K 279
N  301 G 280
N  302 N 281
N  303 N 282
A  304 Y 292
G  305 S 293
G  306 I 294
V  307 T 295
T  308 W 296
V  309 T 297
I  310 A 298
N  311 D 299
N  312 T 300
T  313 K 301
S  314 P 302
Y  315 Y 303
K  316 V 304
N  317 N 305
G  318 A 306
I  319 D 307
N  320 S 308
Y  321 W 309
G  322 T 310
F  323 S 311
G  324 T 312
S  325 G 313
N  326 T 314
V  327 F 315
Q  328 P 316
S  329 T 317
G  330 V 318
Q  331 A 319
K  332 Y 320
H  333 N 321
Y  334 Y 322
F  335 S 323
R  336 P 324
N  337 V 325
N  338 S 326
V  339 A 327
S  340 Q 328
L  341 C 329
S  342 V 330
A  343 K 331
S  344 D 332
V  345 K 333
T  346 L 334
V  347 P 335
S  348 G 336
N  349 Y 337
A  350 A 338
D  351 G 339
A  352 V 340
K  353 G 341
S  354 K 342
N  355 N 343
S  356 L 344
W  357 A 345
D  358 T 346
T  359 L 347
G  360 T 348
P  361 S 349
A  362 T 350
A  363 A 351
S  364 C 352
TER
END

