
PFRMAT SS
TARGET T0101
AUTHOR 3878-6624-7634
REMARK -
METHOD Neural networks trained on latest version of pdb
METHOD See:
METHOD Prediction of protein secondary structure at 80 accuracy
METHOD Thomas Nordahl Petersen, Claus Lundegaard, Morten Nielsen,
METHOD Henrik Bohr, Jakob Bohr, Soren Brunak, Garry P. Gippert,
METHOD Ole Lund, Proteins, in press
MODEL 1
A C  0.99
D C  0.89
C C  0.80
S C  0.70
S C  0.61
D C  0.57
L C  0.55
T C  0.56
S C  0.61
G C  0.65
I C  0.51
S C  0.43
T C  0.46
K C  0.52
R E  0.50
I E  0.76
Y E  0.87
Y E  0.92
V E  0.88
A C  0.56
P C  0.81
N C  0.85
G C  0.84
N C  0.81
S C  0.80
S C  0.89
N C  0.92
N C  0.90
G C  0.87
S C  0.78
S C  0.67
F C  0.67
N C  0.76
A C  0.82
P C  0.75
M C  0.55
S C  0.44
F H  0.77
S H  0.79
A H  0.82
A H  0.80
M H  0.76
A H  0.68
A H  0.51
V C  0.62
N C  0.90
P C  0.93
G C  0.93
E C  0.76
L E  0.87
I E  0.97
L E  0.97
L E  0.91
K C  0.56
P C  0.91
G C  0.92
T C  0.55
Y E  0.75
T E  0.82
I E  0.83
P E  0.74
Y E  0.62
T E  0.58
Q C  0.58
G C  0.74
K C  0.79
G C  0.75
N C  0.64
T E  0.73
I E  0.84
T E  0.84
F E  0.68
N C  0.68
K C  0.77
S C  0.80
G C  0.82
K C  0.80
D C  0.82
G C  0.87
A C  0.85
P C  0.53
I E  0.81
Y E  0.91
V E  0.95
A E  0.94
A E  0.82
A E  0.57
N C  0.70
C C  0.89
G C  0.85
R C  0.53
A E  0.67
V E  0.79
F E  0.82
D E  0.71
F E  0.50
S C  0.66
F C  0.86
P C  0.90
D C  0.65
S C  0.51
Q H  0.48
W H  0.48
V H  0.46
Q H  0.51
A H  0.48
S C  0.38
Y C  0.54
G C  0.55
F E  0.69
Y E  0.84
V E  0.83
T E  0.56
G C  0.78
D C  0.80
Y C  0.75
W C  0.71
Y C  0.55
F E  0.52
K C  0.58
G C  0.51
V E  0.77
E E  0.86
V E  0.91
T E  0.90
R E  0.82
A E  0.55
G C  0.70
Y C  0.76
Q C  0.75
G E  0.50
A E  0.83
Y E  0.94
V E  0.93
I E  0.79
G C  0.58
S C  0.74
H C  0.73
N C  0.63
T E  0.44
F E  0.57
E E  0.49
N E  0.43
T E  0.40
A E  0.41
F E  0.39
H E  0.41
H C  0.41
N C  0.74
R C  0.92
N C  0.91
T C  0.72
G E  0.52
L E  0.84
E E  0.94
I E  0.92
N E  0.68
N C  0.72
G C  0.84
G C  0.80
S C  0.69
Y C  0.58
N E  0.48
T E  0.76
V E  0.86
I E  0.86
N E  0.73
S E  0.51
D C  0.43
A C  0.46
Y C  0.52
R C  0.61
N C  0.73
Y C  0.80
D C  0.92
P C  0.79
K C  0.76
K C  0.75
N C  0.89
G C  0.81
S C  0.71
M C  0.64
A C  0.59
D C  0.63
G C  0.60
F C  0.47
G E  0.41
P E  0.45
K E  0.47
Q E  0.46
K E  0.44
Q C  0.64
G C  0.90
P C  0.89
G C  0.86
N C  0.76
R E  0.64
F E  0.76
V E  0.71
G E  0.61
C E  0.60
R E  0.69
A E  0.59
W C  0.48
E C  0.60
N C  0.70
S C  0.77
D C  0.82
D C  0.82
G C  0.70
F C  0.52
D C  0.47
L C  0.52
F C  0.64
D C  0.84
S C  0.93
P C  0.95
Q C  0.89
K E  0.66
V E  0.95
V E  0.97
I E  0.97
E E  0.79
N C  0.59
S C  0.68
W E  0.45
A E  0.58
F E  0.53
R C  0.52
N C  0.75
G C  0.79
I C  0.61
N C  0.56
Y C  0.57
W C  0.68
N C  0.75
D C  0.74
S C  0.70
A C  0.68
F C  0.68
A C  0.76
G C  0.80
N C  0.84
G C  0.84
N C  0.85
G C  0.65
F E  0.62
K E  0.78
L E  0.72
G C  0.66
G C  0.84
N C  0.87
Q C  0.87
A C  0.81
V C  0.66
G C  0.51
N E  0.51
H E  0.72
R E  0.86
I E  0.88
T E  0.81
R E  0.62
S E  0.56
V E  0.69
A E  0.67
F E  0.57
G C  0.47
N C  0.52
V C  0.58
S C  0.67
K C  0.71
G C  0.77
F C  0.74
D C  0.75
Q C  0.77
N C  0.82
N C  0.84
N C  0.89
A C  0.86
G C  0.79
G E  0.54
V E  0.83
T E  0.92
V E  0.92
I E  0.82
N E  0.56
N C  0.61
T C  0.53
S C  0.47
Y C  0.53
K C  0.68
N C  0.80
G C  0.75
I C  0.50
N E  0.48
Y E  0.49
G E  0.48
F C  0.50
G C  0.65
S C  0.73
N C  0.78
V C  0.68
Q C  0.63
S C  0.65
G C  0.80
Q C  0.73
K E  0.52
H E  0.67
Y E  0.76
F E  0.79
R E  0.68
N E  0.49
N C  0.51
V E  0.68
S E  0.77
L E  0.86
S E  0.83
A E  0.80
S E  0.78
V E  0.76
T E  0.66
V E  0.51
S C  0.56
N C  0.61
A C  0.56
D C  0.55
A C  0.59
K C  0.59
S C  0.59
N C  0.63
S C  0.56
W C  0.55
D C  0.60
T C  0.72
G C  0.86
P C  0.80
A C  0.73
A C  0.66
S C  0.65
A C  0.52
S C  0.58
D C  0.59
F E  0.51
V E  0.69
S E  0.66
L E  0.54
D C  0.49
T C  0.52
S C  0.53
L C  0.55
A C  0.52
T E  0.52
V E  0.60
S E  0.50
R C  0.55
D C  0.78
N C  0.86
D C  0.91
G C  0.89
T C  0.81
L C  0.64
P C  0.57
E C  0.45
T C  0.49
S E  0.52
L E  0.79
F E  0.86
R E  0.88
L E  0.83
S E  0.58
A C  0.68
N C  0.79
S C  0.66
K C  0.47
L E  0.57
I E  0.51
N C  0.55
A C  0.71
G C  0.74
T C  0.65
K C  0.56
E C  0.54
S C  0.57
N C  0.56
I E  0.57
S E  0.60
Y E  0.54
S C  0.61
G C  0.77
S C  0.82
A C  0.84
P C  0.84
D C  0.72
L C  0.65
G C  0.63
A C  0.59
F C  0.56
E C  0.61
R C  0.83
N C  1.00
END

